RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 PPP1R12CQ9BZL4 782 aa5.39□□□□□ -1.55
RNU4-42P-201ENST00000364738 PRDM6Q9NQX0 595 aa5.39□□□□□ -1.55
RNU4-42P-201ENST00000364738 USP17L15C9J2P7 530 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 USP17L10C9JJH3 530 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 USP17L13C9JLJ4 530 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 USP17L12C9JPN9 530 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 USP17L11C9JVI0 530 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 USP17L21D6R901 530 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 USP17L18D6R9N7 530 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 USP17L22D6RA61 530 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 USP17L17D6RBQ6 530 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 USP17L19D6RCP7 530 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 USP17L20D6RJB6 530 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 FAM229AH3BQW9 127 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 APBA3O96018 575 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 USP17L24Q0WX57 530 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 DPYDQ12882 1025 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 PTK7Q13308 1070 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 DOC2BQ14184 412 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 RTN1Q16799 776 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 C8orf86Q6ZUL3 223 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 MICALL1Q8N3F8 863 aa5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 UBE2OQ9C0C9 1292 aaKnown RBP5.38□□□□□ -1.55
RNU4-42P-201ENST00000364738 LILRB5O75023 590 aa5.37□□□□□ -1.55
RNU4-42P-201ENST00000364738 NID1P14543 1247 aa5.37□□□□□ -1.55
RNU4-42P-201ENST00000364738 COL9A3Q14050 684 aaPredicted RBP5.37□□□□□ -1.55
RNU4-42P-201ENST00000364738 XP32Q5T750 250 aa5.37□□□□□ -1.55
RNU4-42P-201ENST00000364738 KANK4Q5T7N3 995 aaPredicted RBP5.37□□□□□ -1.55
RNU4-42P-201ENST00000364738 IER5Q5VY09 327 aa5.37□□□□□ -1.55
RNU4-42P-201ENST00000364738 ANKMY2Q8IV38 441 aa5.37□□□□□ -1.55
RNU4-42P-201ENST00000364738 PNMA5Q96PV4 448 aa5.37□□□□□ -1.55
RNU4-42P-201ENST00000364738 IGFLR1Q9H665 355 aa5.37□□□□□ -1.55
RNU4-42P-201ENST00000364738 A6NJR5 290 aa5.36□□□□□ -1.55
RNU4-42P-201ENST00000364738 FAM196BA6NMK8 535 aa5.36□□□□□ -1.55
RNU4-42P-201ENST00000364738 TGFBR3LH3BV60 316 aa5.36□□□□□ -1.55
RNU4-42P-201ENST00000364738 IGFBP4P22692 258 aa5.36□□□□□ -1.55
RNU4-42P-201ENST00000364738 LMOD1P29536 600 aaPredicted RBP5.36□□□□□ -1.55
RNU4-42P-201ENST00000364738 TRIM28Q13263 835 aaKnown RBP5.36□□□□□ -1.55
RNU4-42P-201ENST00000364738 C20orf204Q6ZNR8 217 aa5.36□□□□□ -1.55
RNU4-42P-201ENST00000364738 NACC1Q96RE7 527 aa5.36□□□□□ -1.55
RNU4-42P-201ENST00000364738 SEMA6BQ9H3T3 888 aa5.36□□□□□ -1.55
RNU4-42P-201ENST00000364738 SLC6A14Q9UN76 642 aa5.36□□□□□ -1.55
RNU4-42P-201ENST00000364738 EPB42P16452 691 aa5.35□□□□□ -1.55
RNU4-42P-201ENST00000364738 NFKB1P19838 968 aa5.35□□□□□ -1.55
RNU4-42P-201ENST00000364738 TRAPPC3LQ5T215 181 aa5.35□□□□□ -1.55
RNU4-42P-201ENST00000364738 VRTNQ9H8Y1 702 aa5.35□□□□□ -1.55
RNU4-42P-201ENST00000364738 EFCC1Q9HA90 598 aa5.35□□□□□ -1.55
RNU4-42P-201ENST00000364738 JPH1Q9HDC5 661 aaPredicted RBP5.35□□□□□ -1.55
RNU4-42P-201ENST00000364738 KLK14Q9P0G3 267 aa5.35□□□□□ -1.55
RNU4-42P-201ENST00000364738 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.35□□□□□ -1.55
RNU4-42P-201ENST00000364738 CCINQ13939 588 aa5.34□□□□□ -1.55
RNU4-42P-201ENST00000364738 GRIK4Q16099 956 aa5.34□□□□□ -1.55
RNU4-42P-201ENST00000364738 Q8N3U1 123 aa5.34□□□□□ -1.55
RNU4-42P-201ENST00000364738 NUDT8Q8WV74 236 aa5.34□□□□□ -1.55
RNU4-42P-201ENST00000364738 VTI1AQ96AJ9 217 aa5.34□□□□□ -1.55
RNU4-42P-201ENST00000364738 GSX2Q9BZM3 304 aa5.34□□□□□ -1.55
RNU4-42P-201ENST00000364738 DNAJB12Q9NXW2 375 aaKnown RBP5.34□□□□□ -1.55
RNU4-42P-201ENST00000364738 NAGPAQ9UK23 515 aa5.34□□□□□ -1.55
RNU4-42P-201ENST00000364738 BCS1LQ9Y276 419 aa5.34□□□□□ -1.55
RNU4-42P-201ENST00000364738 ITGB7P26010 798 aa5.33□□□□□ -1.56
RNU4-42P-201ENST00000364738 IDH3AP50213 366 aa5.33□□□□□ -1.56
RNU4-42P-201ENST00000364738 DGKZQ13574 1117 aa5.33□□□□□ -1.56
RNU4-42P-201ENST00000364738 PSAPL1Q6NUJ1 521 aa5.33□□□□□ -1.56
RNU4-42P-201ENST00000364738 ARXQ96QS3 562 aa5.33□□□□□ -1.56
RNU4-42P-201ENST00000364738 QTRT2Q9H974 415 aaKnown RBP5.33□□□□□ -1.56
RNU4-42P-201ENST00000364738 TPSG1Q9NRR2 321 aa5.33□□□□□ -1.56
RNU4-42P-201ENST00000364738 DMGDHQ9UI17 866 aaKnown RBP5.33□□□□□ -1.56
RNU4-42P-201ENST00000364738 A0A0A0MRY4 1105 aa5.32□□□□□ -1.56
RNU4-42P-201ENST00000364738 FOXO3O43524 673 aa5.32□□□□□ -1.56
RNU4-42P-201ENST00000364738 ELNP15502 786 aa5.32□□□□□ -1.56
RNU4-42P-201ENST00000364738 WEE1P30291 646 aa5.32□□□□□ -1.56
RNU4-42P-201ENST00000364738 INPP5BP32019 993 aa5.32□□□□□ -1.56
RNU4-42P-201ENST00000364738 RAC1P63000 192 aa5.32□□□□□ -1.56
RNU4-42P-201ENST00000364738 RSPO4Q2I0M5 234 aaPredicted RBP5.32□□□□□ -1.56
RNU4-42P-201ENST00000364738 RGS9O75916 674 aaPredicted RBP5.31□□□□□ -1.56
RNU4-42P-201ENST00000364738 GRNP28799 593 aaKnown RBP5.31□□□□□ -1.56
RNU4-42P-201ENST00000364738 ARSDP51689 593 aa5.31□□□□□ -1.56
RNU4-42P-201ENST00000364738 AFF1P51825 1210 aaKnown RBP5.31□□□□□ -1.56
RNU4-42P-201ENST00000364738 CFAP70Q5T0N1 1121 aa5.31□□□□□ -1.56
RNU4-42P-201ENST00000364738 KRT25Q7Z3Z0 450 aa5.31□□□□□ -1.56
RNU4-42P-201ENST00000364738 FAM35AQ86V20 835 aa5.31□□□□□ -1.56
RNU4-42P-201ENST00000364738 C9orf172C9J069 976 aa5.3□□□□□ -1.56
RNU4-42P-201ENST00000364738 MAP3K6O95382 1288 aa5.3□□□□□ -1.56
RNU4-42P-201ENST00000364738 CPB1P15086 417 aa5.3□□□□□ -1.56
RNU4-42P-201ENST00000364738 MBTPS1Q14703 1052 aa5.3□□□□□ -1.56
RNU4-42P-201ENST00000364738 PCSK7Q16549 785 aa5.3□□□□□ -1.56
RNU4-42P-201ENST00000364738 NKAPLQ5M9Q1 402 aa5.3□□□□□ -1.56
RNU4-42P-201ENST00000364738 ZMYM1Q5SVZ6 1142 aa5.3□□□□□ -1.56
RNU4-42P-201ENST00000364738 FAM200AQ8TCP9 573 aa5.3□□□□□ -1.56
RNU4-42P-201ENST00000364738 DYRK3O43781 588 aa5.29□□□□□ -1.56
RNU4-42P-201ENST00000364738 MICAL2O94851 1124 aa5.29□□□□□ -1.56
RNU4-42P-201ENST00000364738 RARAP10276 462 aa5.29□□□□□ -1.56
RNU4-42P-201ENST00000364738 SELPP16109 830 aa5.29□□□□□ -1.56
RNU4-42P-201ENST00000364738 RFX1P22670 979 aa5.29□□□□□ -1.56
RNU4-42P-201ENST00000364738 MLLT1Q03111 559 aaPredicted RBP5.29□□□□□ -1.56
RNU4-42P-201ENST00000364738 CDCA8Q53HL2 280 aa5.29□□□□□ -1.56
RNU4-42P-201ENST00000364738 SHISA2Q6UWI4 295 aa5.29□□□□□ -1.56
RNU4-42P-201ENST00000364738 DHX32Q7L7V1 743 aaKnown RBP5.29□□□□□ -1.56
RNU4-42P-201ENST00000364738 DMRTC2Q8IXT2 367 aaPredicted RBP5.29□□□□□ -1.56
RNU4-42P-201ENST00000364738 FMR1NBQ8N0W7 255 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms