RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 LDHAL6AQ6ZMR3 332 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 C1orf167Q5SNV9 1468 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 SLC5A1P13866 664 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 RRP12Q5JTH9 1297 aaKnown RBP8.33□□□□□ -1.08
RAB5B-201ENST00000360299 C20orf194Q5TEA3 1177 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 USPL1Q5W0Q7 1092 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 BLOC1S2Q6QNY1 142 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 SASS6Q6UVJ0 657 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 ADGRB3O60242 1522 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 IDH1O75874 414 aaKnown RBP8.33□□□□□ -1.08
RAB5B-201ENST00000360299 MMP10P09238 476 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 USP5P45974 858 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 FEZ1Q99689 392 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 EXOC6BQ9Y2D4 811 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 WDR33Q9C0J8 1336 aaKnown RBP8.33□□□□□ -1.08
RAB5B-201ENST00000360299 ALDH1L1O75891 902 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 ZNF396Q96N95 335 aaPredicted RBP8.33□□□□□ -1.08
RAB5B-201ENST00000360299 A1BGP04217 495 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 IBSPP21815 317 aaPredicted RBP8.33□□□□□ -1.08
RAB5B-201ENST00000360299 IL1RAPL2Q9NP60 686 aa8.33□□□□□ -1.08
RAB5B-201ENST00000360299 PRR36Q9H6K5 1346 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 KDM5AP29375 1690 aaKnown RBP8.32□□□□□ -1.08
RAB5B-201ENST00000360299 ALDH1B1P30837 517 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 BMP2KLQ5H9B9 411 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 CHPF2Q9P2E5 772 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 ASAP1Q9ULH1 1129 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 H7C1D1 291 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 FOXD4L6Q3SYB3 417 aaPredicted RBP8.32□□□□□ -1.08
RAB5B-201ENST00000360299 FOXD4L3Q6VB84 417 aaPredicted RBP8.32□□□□□ -1.08
RAB5B-201ENST00000360299 MAP3K5Q99683 1374 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 GRIN3BO60391 1043 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 UFL1O94874 794 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 JMYQ8N9B5 988 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 SUPT20HQ8NEM7 779 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 SLC52A2Q9HAB3 445 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 ZMYM4Q5VZL5 1548 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 ERVV-2B6SEH9 535 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 SLF2Q8IX21 1173 aa8.32□□□□□ -1.08
RAB5B-201ENST00000360299 IQSEC3Q9UPP2 1182 aaPredicted RBP8.32□□□□□ -1.08
RAB5B-201ENST00000360299 CDKL5O76039 1030 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 POLR3DP05423 398 aaPredicted RBP8.31□□□□□ -1.08
RAB5B-201ENST00000360299 ZNF790Q6PG37 636 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 CNKSR2Q8WXI2 1034 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 CNKSR1Q969H4 720 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 NAT10Q9H0A0 1025 aaKnown RBP8.31□□□□□ -1.08
RAB5B-201ENST00000360299 SETD1BQ9UPS6 1966 aaKnown RBP8.31□□□□□ -1.08
RAB5B-201ENST00000360299 KCNQ2O43526 872 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 YY1P25490 414 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 MRE11P49959 708 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 TRIM22Q8IYM9 498 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 RNF181Q9P0P0 153 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 LRRFIP2Q9Y608 721 aaKnown RBP8.31□□□□□ -1.08
RAB5B-201ENST00000360299 PPLO60437 1756 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 CPS1P31327 1500 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 F6X3S4 739 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 IRS4O14654 1257 aaPredicted RBP8.31□□□□□ -1.08
RAB5B-201ENST00000360299 HCLS1P14317 486 aaPredicted RBP8.31□□□□□ -1.08
RAB5B-201ENST00000360299 CRKLP46109 303 aaKnown RBP8.31□□□□□ -1.08
RAB5B-201ENST00000360299 TCIRG1Q13488 830 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 NUTM1Q86Y26 1132 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 LGR6Q9HBX8 967 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 RTN4Q9NQC3 1192 aaKnown RBP8.31□□□□□ -1.08
RAB5B-201ENST00000360299 PHKG2P15735 406 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 ZNF804AQ7Z570 1209 aa8.31□□□□□ -1.08
RAB5B-201ENST00000360299 CCDC43Q96MW1 224 aaKnown RBP8.31□□□□□ -1.08
RAB5B-201ENST00000360299 U3KPZ7 1027 aaPredicted RBP8.31□□□□□ -1.08
RAB5B-201ENST00000360299 MYO3AQ8NEV4 1616 aa8.3□□□□□ -1.08
RAB5B-201ENST00000360299 PIM2Q9P1W9 311 aa8.3□□□□□ -1.08
RAB5B-201ENST00000360299 JAG2Q9Y219 1238 aa8.3□□□□□ -1.08
RAB5B-201ENST00000360299 PI4KAP2A4QPH2 592 aa8.3□□□□□ -1.08
RAB5B-201ENST00000360299 POTEAQ6S8J7 498 aa8.3□□□□□ -1.08
RAB5B-201ENST00000360299 MRPL50Q8N5N7 158 aaKnown RBP8.3□□□□□ -1.08
RAB5B-201ENST00000360299 PI4KAP1Q8N8J0 262 aa8.3□□□□□ -1.08
RAB5B-201ENST00000360299 HMGB1P09429 215 aaKnown RBP8.3□□□□□ -1.08
RAB5B-201ENST00000360299 HOXB7P09629 217 aa8.3□□□□□ -1.08
RAB5B-201ENST00000360299 ECHDC1Q9NTX5 307 aa8.3□□□□□ -1.08
RAB5B-201ENST00000360299 TRAK2O60296 914 aa8.3□□□□□ -1.08
RAB5B-201ENST00000360299 SOGA3Q5TF21 947 aa8.3□□□□□ -1.08
RAB5B-201ENST00000360299 RSPH6AQ9H0K4 717 aa8.3□□□□□ -1.08
RAB5B-201ENST00000360299 ZC3H13Q5T200 1668 aaKnown RBP8.3□□□□□ -1.08
RAB5B-201ENST00000360299 PALLDQ8WX93 1383 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 SLC4A8Q2Y0W8 1093 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 CWC27Q6UX04 472 aaKnown RBP8.29□□□□□ -1.08
RAB5B-201ENST00000360299 PDRG1Q9NUG6 133 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 ADGRB1O14514 1584 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 ERBB3P21860 1342 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 IMMTQ16891 758 aaKnown RBP8.29□□□□□ -1.08
RAB5B-201ENST00000360299 ANKRD44Q8N8A2 993 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 EVI5LQ96CN4 794 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 SDF4Q9BRK5 362 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 VAMP4O75379 141 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 SERPINB2P05120 415 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 ERFEQ4G0M1 354 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 KSR2Q6VAB6 950 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 SKAP1Q86WV1 359 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 MPNDQ8N594 471 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 ZNF287Q9HBT7 754 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 FAM135BQ49AJ0 1406 aa8.29□□□□□ -1.08
RAB5B-201ENST00000360299 KRT85P78386 507 aa8.28□□□□□ -1.08
RAB5B-201ENST00000360299 PARP10Q53GL7 1025 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms