RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 POTECB2RU33 542 aa21.8■■□□□ 1.08
PDLIM7-201ENST00000355572 GTF2E1P29083 439 aaPredicted RBP21.8■■□□□ 1.08
PDLIM7-201ENST00000355572 NLRP10Q86W26 655 aa21.8■■□□□ 1.08
PDLIM7-201ENST00000355572 NYXQ9GZU5 481 aa21.8■■□□□ 1.08
PDLIM7-201ENST00000355572 TSPYL6Q8N831 410 aa21.79■■□□□ 1.08
PDLIM7-201ENST00000355572 TAOK3Q9H2K8 898 aa21.79■■□□□ 1.08
PDLIM7-201ENST00000355572 MRS2Q9HD23 443 aa21.79■■□□□ 1.08
PDLIM7-201ENST00000355572 HOXB7P09629 217 aa21.78■■□□□ 1.08
PDLIM7-201ENST00000355572 TSR2Q969E8 191 aaKnown RBP21.78■■□□□ 1.08
PDLIM7-201ENST00000355572 PHAXQ9H814 394 aaKnown RBP21.78■■□□□ 1.08
PDLIM7-201ENST00000355572 GLTPD2A6NH11 291 aa21.77■■□□□ 1.08
PDLIM7-201ENST00000355572 TOMM70O94826 608 aa21.77■■□□□ 1.08
PDLIM7-201ENST00000355572 GNAI1P63096 354 aa21.77■■□□□ 1.08
PDLIM7-201ENST00000355572 TCIRG1Q13488 830 aa21.77■■□□□ 1.08
PDLIM7-201ENST00000355572 PARP10Q53GL7 1025 aa21.77■■□□□ 1.08
PDLIM7-201ENST00000355572 KDM2BQ8NHM5 1336 aa21.77■■□□□ 1.07
PDLIM7-201ENST00000355572 HSPA6P17066 643 aa21.76■■□□□ 1.07
PDLIM7-201ENST00000355572 HOXA10P31260 410 aaPredicted RBP21.76■■□□□ 1.07
PDLIM7-201ENST00000355572 CCDC93Q567U6 631 aa21.76■■□□□ 1.07
PDLIM7-201ENST00000355572 ZNF277Q9NRM2 450 aaPredicted RBP21.76■■□□□ 1.07
PDLIM7-201ENST00000355572 ZC3H4Q9UPT8 1303 aaKnown RBP21.76■■□□□ 1.07
PDLIM7-201ENST00000355572 ANP32CO43423 234 aa21.75■■□□□ 1.07
PDLIM7-201ENST00000355572 HCLS1P14317 486 aaPredicted RBP21.75■■□□□ 1.07
PDLIM7-201ENST00000355572 PPP1R42Q7Z4L9 355 aa21.75■■□□□ 1.07
PDLIM7-201ENST00000355572 WWC1Q8IX03 1113 aa21.75■■□□□ 1.07
PDLIM7-201ENST00000355572 UTP14AQ9BVJ6 771 aaKnown RBP21.75■■□□□ 1.07
PDLIM7-201ENST00000355572 ATP5J2-PTCD1G3V325 749 aa21.74■■□□□ 1.07
PDLIM7-201ENST00000355572 SLC10A5Q5PT55 438 aa21.74■■□□□ 1.07
PDLIM7-201ENST00000355572 PLBD2Q8NHP8 589 aa21.74■■□□□ 1.07
PDLIM7-201ENST00000355572 ISCA1Q9BUE6 129 aa21.74■■□□□ 1.07
PDLIM7-201ENST00000355572 DBF4Q9UBU7 674 aaPredicted RBP21.74■■□□□ 1.07
PDLIM7-201ENST00000355572 TCERG1O14776 1098 aaKnown RBP21.73■■□□□ 1.07
PDLIM7-201ENST00000355572 ALDH1B1P30837 517 aa21.73■■□□□ 1.07
PDLIM7-201ENST00000355572 FKBP4Q02790 459 aaKnown RBP eCLIP21.73■■□□□ 1.07
PDLIM7-201ENST00000355572 LRRC37AA6NMS7 1700 aa21.72■■□□□ 1.07
PDLIM7-201ENST00000355572 DDNO94850 711 aaPredicted RBP21.72■■□□□ 1.07
PDLIM7-201ENST00000355572 ANKRD13DQ6ZTN6 518 aa21.72■■□□□ 1.07
PDLIM7-201ENST00000355572 RPGRQ92834 1020 aaKnown RBP21.72■■□□□ 1.07
PDLIM7-201ENST00000355572 ZNF541Q9H0D2 1346 aa21.72■■□□□ 1.07
PDLIM7-201ENST00000355572 CCDC27Q2M243 656 aa21.71■■□□□ 1.07
PDLIM7-201ENST00000355572 SOGA3Q5TF21 947 aa21.71■■□□□ 1.07
PDLIM7-201ENST00000355572 RBM46Q8TBY0 533 aaKnown RBP21.71■■□□□ 1.07
PDLIM7-201ENST00000355572 CRAMP1Q96RY5 1269 aa21.71■■□□□ 1.07
PDLIM7-201ENST00000355572 SALL2Q9Y467 1007 aaPredicted RBP21.71■■□□□ 1.07
PDLIM7-201ENST00000355572 ABCC4O15439 1325 aa21.71■■□□□ 1.07
PDLIM7-201ENST00000355572 LTBP1Q14766 1721 aa21.71■■□□□ 1.07
PDLIM7-201ENST00000355572 HTRA3P83110 453 aa21.7■■□□□ 1.06
PDLIM7-201ENST00000355572 HSP90AB3PQ58FF7 597 aa21.7■■□□□ 1.06
PDLIM7-201ENST00000355572 HYPKQ9NX55 129 aa21.7■■□□□ 1.06
PDLIM7-201ENST00000355572 TRMT112Q9UI30 125 aaKnown RBP21.7■■□□□ 1.06
PDLIM7-201ENST00000355572 DUOX1Q9NRD9 1551 aa21.7■■□□□ 1.06
PDLIM7-201ENST00000355572 SCN4AP35499 1836 aa21.69■■□□□ 1.06
PDLIM7-201ENST00000355572 CALD1Q05682 793 aaKnown RBP21.69■■□□□ 1.06
PDLIM7-201ENST00000355572 NLRP3Q96P20 1036 aa21.69■■□□□ 1.06
PDLIM7-201ENST00000355572 SPINK5Q9NQ38 1064 aaPredicted RBP21.69■■□□□ 1.06
PDLIM7-201ENST00000355572 PPEF1O14829 653 aaPredicted RBP21.68■■□□□ 1.06
PDLIM7-201ENST00000355572 POTEIP0CG38 1075 aa21.68■■□□□ 1.06
PDLIM7-201ENST00000355572 POTEJP0CG39 1038 aa21.68■■□□□ 1.06
PDLIM7-201ENST00000355572 RTL5Q5HYW3 569 aaPredicted RBP21.68■■□□□ 1.06
PDLIM7-201ENST00000355572 FAM89AQ96GI7 184 aa21.68■■□□□ 1.06
PDLIM7-201ENST00000355572 RBM17Q96I25 401 aaKnown RBP21.68■■□□□ 1.06
PDLIM7-201ENST00000355572 CEP350Q5VT06 3117 aa21.67■■□□□ 1.06
PDLIM7-201ENST00000355572 SH3TC1Q8TE82 1336 aa21.67■■□□□ 1.06
PDLIM7-201ENST00000355572 IARSP41252 1262 aaKnown RBP21.67■■□□□ 1.06
PDLIM7-201ENST00000355572 ADAMTSL1Q8N6G6 1762 aa21.66■■□□□ 1.06
PDLIM7-201ENST00000355572 RNF123Q5XPI4 1314 aa21.66■■□□□ 1.06
PDLIM7-201ENST00000355572 VEGFAP15692 232 aaPredicted RBP21.66■■□□□ 1.06
PDLIM7-201ENST00000355572 G2E3Q7L622 706 aa21.66■■□□□ 1.06
PDLIM7-201ENST00000355572 RTKN2Q8IZC4 609 aa21.66■■□□□ 1.06
PDLIM7-201ENST00000355572 JARID2Q92833 1246 aaPredicted RBP21.66■■□□□ 1.06
PDLIM7-201ENST00000355572 SPEF2Q9C093 1822 aa21.65■■□□□ 1.06
PDLIM7-201ENST00000355572 C16orf71Q8IYS4 520 aaPredicted RBP21.65■■□□□ 1.06
PDLIM7-201ENST00000355572 PSMD1Q99460 953 aa21.65■■□□□ 1.06
PDLIM7-201ENST00000355572 FANCIQ9NVI1 1328 aa21.64■■□□□ 1.05
PDLIM7-201ENST00000355572 DPY19L2Q6NUT2 758 aa21.64■■□□□ 1.05
PDLIM7-201ENST00000355572 FAM9BQ8IZU0 186 aa21.64■■□□□ 1.05
PDLIM7-201ENST00000355572 MYD88Q99836 296 aa21.64■■□□□ 1.05
PDLIM7-201ENST00000355572 CACNA1FO60840 1977 aa21.64■■□□□ 1.05
PDLIM7-201ENST00000355572 MYH3P11055 1940 aa21.64■■□□□ 1.05
PDLIM7-201ENST00000355572 FZD9O00144 591 aa21.63■■□□□ 1.05
PDLIM7-201ENST00000355572 RIC3Q7Z5B4 369 aa21.63■■□□□ 1.05
PDLIM7-201ENST00000355572 ATP6V0A2Q9Y487 856 aa21.63■■□□□ 1.05
PDLIM7-201ENST00000355572 IL16Q14005 1332 aa21.62■■□□□ 1.05
PDLIM7-201ENST00000355572 TRIM28Q13263 835 aaKnown RBP21.62■■□□□ 1.05
PDLIM7-201ENST00000355572 CELF1Q92879 486 aaKnown RBP21.62■■□□□ 1.05
PDLIM7-201ENST00000355572 GOLGA2Q08379 1002 aa21.61■■□□□ 1.05
PDLIM7-201ENST00000355572 FSTL1Q12841 308 aa21.61■■□□□ 1.05
PDLIM7-201ENST00000355572 TWISTNBQ3B726 338 aaPredicted RBP21.61■■□□□ 1.05
PDLIM7-201ENST00000355572 CCDC30Q5VVM6 783 aa21.61■■□□□ 1.05
PDLIM7-201ENST00000355572 DNAJC5GQ8N7S2 189 aa21.61■■□□□ 1.05
PDLIM7-201ENST00000355572 NCBP3Q53F19 620 aaKnown RBP21.6■■□□□ 1.05
PDLIM7-201ENST00000355572 CC2D2BQ6DHV5 1058 aa21.6■■□□□ 1.05
PDLIM7-201ENST00000355572 L3MBTL3Q96JM7 780 aaPredicted RBP21.6■■□□□ 1.05
PDLIM7-201ENST00000355572 IGKV5-2P06315 115 aa21.59■■□□□ 1.05
PDLIM7-201ENST00000355572 APLP1P51693 650 aa21.59■■□□□ 1.05
PDLIM7-201ENST00000355572 GRAPQ13588 217 aa21.59■■□□□ 1.05
PDLIM7-201ENST00000355572 AOC3Q16853 763 aa21.59■■□□□ 1.05
PDLIM7-201ENST00000355572 SMC1BQ8NDV3 1235 aa21.59■■□□□ 1.05
PDLIM7-201ENST00000355572 GRAPLQ8TC17 118 aaPredicted RBP21.59■■□□□ 1.05
PDLIM7-201ENST00000355572 METTL22Q9BUU2 404 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms