RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 RNF20Q5VTR2 975 aa15.48■□□□□ 0.07
RNF220-202ENST00000355387 NPHP4O75161 1426 aaPredicted RBP15.48■□□□□ 0.07
RNF220-202ENST00000355387 G3BP1Q13283 466 aaKnown RBP eCLIP15.47■□□□□ 0.07
RNF220-202ENST00000355387 CREB3L3Q68CJ9 461 aa15.47■□□□□ 0.07
RNF220-202ENST00000355387 PRPF40BQ6NWY9 871 aaKnown RBP15.47■□□□□ 0.07
RNF220-202ENST00000355387 SASS6Q6UVJ0 657 aa15.47■□□□□ 0.07
RNF220-202ENST00000355387 AACSQ86V21 672 aa15.47■□□□□ 0.07
RNF220-202ENST00000355387 KAZALD1Q96I82 304 aa15.47■□□□□ 0.07
RNF220-202ENST00000355387 SASH1O94885 1247 aa15.47■□□□□ 0.07
RNF220-202ENST00000355387 TPM3P06753 285 aa15.47■□□□□ 0.07
RNF220-202ENST00000355387 LARP1Q6PKG0 1096 aaKnown RBP15.47■□□□□ 0.07
RNF220-202ENST00000355387 MTERF4Q7Z6M4 381 aaKnown RBP15.47■□□□□ 0.07
RNF220-202ENST00000355387 RNF214Q8ND24 703 aa15.47■□□□□ 0.07
RNF220-202ENST00000355387 GDPD2Q9HCC8 539 aa15.47■□□□□ 0.07
RNF220-202ENST00000355387 RBM8AQ9Y5S9 174 aaKnown RBP15.47■□□□□ 0.07
RNF220-202ENST00000355387 ARFGEF2Q9Y6D5 1785 aa15.47■□□□□ 0.07
RNF220-202ENST00000355387 DYNC1I1O14576 645 aa15.47■□□□□ 0.07
RNF220-202ENST00000355387 LARGE1O95461 756 aa15.46■□□□□ 0.07
RNF220-202ENST00000355387 ANKRD24Q8TF21 1146 aa15.46■□□□□ 0.07
RNF220-202ENST00000355387 LRRC59Q96AG4 307 aaKnown RBP15.46■□□□□ 0.07
RNF220-202ENST00000355387 SUCLG2Q96I99 432 aa15.46■□□□□ 0.07
RNF220-202ENST00000355387 MYH15Q9Y2K3 1946 aa15.46■□□□□ 0.07
RNF220-202ENST00000355387 COL18A1P39060 1754 aa15.46■□□□□ 0.07
RNF220-202ENST00000355387 PDIA6Q15084 440 aa15.46■□□□□ 0.07
RNF220-202ENST00000355387 ADCK5Q3MIX3 580 aa15.46■□□□□ 0.07
RNF220-202ENST00000355387 ESCO1Q5FWF5 840 aa15.46■□□□□ 0.07
RNF220-202ENST00000355387 XPCQ01831 940 aaPredicted RBP15.45■□□□□ 0.06
RNF220-202ENST00000355387 ST3GAL1Q11201 340 aa15.45■□□□□ 0.06
RNF220-202ENST00000355387 PROSER3Q2NL68 480 aa15.45■□□□□ 0.06
RNF220-202ENST00000355387 CCDC83Q8IWF9 413 aa15.45■□□□□ 0.06
RNF220-202ENST00000355387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.45■□□□□ 0.061e-6■□□□□ 8.4
RNF220-202ENST00000355387 ADAMTSL3P82987 1691 aa15.45■□□□□ 0.06
RNF220-202ENST00000355387 SLC27A2O14975 620 aa15.45■□□□□ 0.06
RNF220-202ENST00000355387 USPL1Q5W0Q7 1092 aa15.45■□□□□ 0.06
RNF220-202ENST00000355387 PIBF1Q8WXW3 757 aa15.45■□□□□ 0.06
RNF220-202ENST00000355387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.45■□□□□ 0.06
RNF220-202ENST00000355387 ANXA1P04083 346 aa15.45■□□□□ 0.06
RNF220-202ENST00000355387 PTMAP06454 111 aaKnown RBP15.45■□□□□ 0.06
RNF220-202ENST00000355387 NMIQ13287 307 aaPredicted RBP15.45■□□□□ 0.06
RNF220-202ENST00000355387 ME3Q16798 604 aa15.45■□□□□ 0.06
RNF220-202ENST00000355387 EAF2Q96CJ1 260 aaPredicted RBP15.45■□□□□ 0.06
RNF220-202ENST00000355387 KDM4AO75164 1064 aa15.44■□□□□ 0.06
RNF220-202ENST00000355387 KRT32Q14532 448 aa15.44■□□□□ 0.06
RNF220-202ENST00000355387 BICC1Q9H694 974 aaKnown RBP15.44■□□□□ 0.06
RNF220-202ENST00000355387 R3HCC1Q9Y3T6 440 aaKnown RBP15.44■□□□□ 0.06
RNF220-202ENST00000355387 SPEF2Q9C093 1822 aa15.44■□□□□ 0.06
RNF220-202ENST00000355387 CWF19L2Q2TBE0 894 aaKnown RBP15.44■□□□□ 0.06
RNF220-202ENST00000355387 COPRSQ9NQ92 184 aa15.44■□□□□ 0.06
RNF220-202ENST00000355387 USP25Q9UHP3 1055 aa15.44■□□□□ 0.06
RNF220-202ENST00000355387 PA2G4Q9UQ80 394 aaKnown RBP15.44■□□□□ 0.06
RNF220-202ENST00000355387 KRT85P78386 507 aa15.43■□□□□ 0.06
RNF220-202ENST00000355387 RPS6KB1P23443 525 aa15.43■□□□□ 0.06
RNF220-202ENST00000355387 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
RNF220-202ENST00000355387 KDM6AO15550 1401 aaPredicted RBP15.43■□□□□ 0.06
RNF220-202ENST00000355387 BLOC1S2Q6QNY1 142 aa15.42■□□□□ 0.06
RNF220-202ENST00000355387 PRIMPOLQ96LW4 560 aa15.42■□□□□ 0.06
RNF220-202ENST00000355387 SPTLC3Q9NUV7 552 aa15.42■□□□□ 0.06
RNF220-202ENST00000355387 TPCN1Q9ULQ1 816 aa15.42■□□□□ 0.06
RNF220-202ENST00000355387 GLI3P10071 1580 aa15.42■□□□□ 0.06
RNF220-202ENST00000355387 NEURL1BA8MQ27 555 aa15.42■□□□□ 0.06
RNF220-202ENST00000355387 FIBPO43427 364 aa15.42■□□□□ 0.06
RNF220-202ENST00000355387 IGKV5-2P06315 115 aa15.42■□□□□ 0.06
RNF220-202ENST00000355387 METTL22Q9BUU2 404 aaPredicted RBP15.42■□□□□ 0.06
RNF220-202ENST00000355387 ERBB3P21860 1342 aa15.42■□□□□ 0.06
RNF220-202ENST00000355387 ATP5JP18859 108 aa15.42■□□□□ 0.06
RNF220-202ENST00000355387 DNM1Q05193 864 aaKnown RBP15.42■□□□□ 0.06
RNF220-202ENST00000355387 SCAND2PQ9GZW5 306 aaPredicted RBP15.42■□□□□ 0.06
RNF220-202ENST00000355387 TMEM94Q12767 1356 aa15.41■□□□□ 0.06
RNF220-202ENST00000355387 ADCY5O95622 1261 aa15.41■□□□□ 0.06
RNF220-202ENST00000355387 GCKRQ14397 625 aa15.41■□□□□ 0.06
RNF220-202ENST00000355387 CCDC192P0DO97 292 aa15.41■□□□□ 0.06
RNF220-202ENST00000355387 HCLS1P14317 486 aaPredicted RBP15.41■□□□□ 0.06
RNF220-202ENST00000355387 CPA1P15085 419 aa15.41■□□□□ 0.06
RNF220-202ENST00000355387 RABL6Q3YEC7 729 aaPredicted RBP15.41■□□□□ 0.06
RNF220-202ENST00000355387 ZNF790Q6PG37 636 aa15.41■□□□□ 0.06
RNF220-202ENST00000355387 FAM227BQ96M60 508 aa15.41■□□□□ 0.06
RNF220-202ENST00000355387 SLC52A2Q9HAB3 445 aa15.41■□□□□ 0.06
RNF220-202ENST00000355387 UQCRHLA0A096LP55 91 aa15.4■□□□□ 0.06
RNF220-202ENST00000355387 UQCRHP07919 91 aa15.4■□□□□ 0.06
RNF220-202ENST00000355387 HMGN5P82970 282 aaKnown RBP15.4■□□□□ 0.06
RNF220-202ENST00000355387 RBM43Q6ZSC3 357 aaKnown RBP15.4■□□□□ 0.06
RNF220-202ENST00000355387 FSD1Q9BTV5 496 aa15.4■□□□□ 0.06
RNF220-202ENST00000355387 LAMA4Q16363 1823 aa15.4■□□□□ 0.06
RNF220-202ENST00000355387 NPHP3Q7Z494 1330 aa15.4■□□□□ 0.06
RNF220-202ENST00000355387 KCNJ4P48050 445 aa15.4■□□□□ 0.06
RNF220-202ENST00000355387 LARP1BQ659C4 914 aaKnown RBP15.4■□□□□ 0.06
RNF220-202ENST00000355387 NUP188Q5SRE5 1749 aa15.4■□□□□ 0.06
RNF220-202ENST00000355387 A0A0D9SFI3 127 aa15.4■□□□□ 0.06
RNF220-202ENST00000355387 FOXD4L6Q3SYB3 417 aaPredicted RBP15.4■□□□□ 0.06
RNF220-202ENST00000355387 FOXD4L3Q6VB84 417 aaPredicted RBP15.4■□□□□ 0.06
RNF220-202ENST00000355387 RIC3Q7Z5B4 369 aa15.39■□□□□ 0.05
RNF220-202ENST00000355387 GTF2F1P35269 517 aaKnown RBP eCLIP15.39■□□□□ 0.059e-7■■■□□ 18.7
RNF220-202ENST00000355387 C1orf167Q5SNV9 1468 aa15.39■□□□□ 0.05
RNF220-202ENST00000355387 UBR2Q8IWV8 1755 aa15.38■□□□□ 0.05
RNF220-202ENST00000355387 TAF5LO75529 589 aa15.38■□□□□ 0.05
RNF220-202ENST00000355387 RFX5P48382 616 aaPredicted RBP15.38■□□□□ 0.05
RNF220-202ENST00000355387 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
RNF220-202ENST00000355387 LRP10Q7Z4F1 713 aa15.38■□□□□ 0.05
RNF220-202ENST00000355387 DDX19AQ9NUU7 478 aaKnown RBP15.38■□□□□ 0.05
RNF220-202ENST00000355387 MYRIPQ8NFW9 859 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms