RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 CCDC171Q6TFL3 1326 aa16.89■□□□□ 0.29
PGBD2-202ENST00000355360 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
PGBD2-202ENST00000355360 CCDC129Q6ZRS4 1044 aa16.88■□□□□ 0.29
PGBD2-202ENST00000355360 USP42Q9H9J4 1324 aaKnown RBP16.88■□□□□ 0.29
PGBD2-202ENST00000355360 CYP27B1O15528 508 aa16.88■□□□□ 0.29
PGBD2-202ENST00000355360 ZSCAN22P10073 491 aaPredicted RBP16.88■□□□□ 0.29
PGBD2-202ENST00000355360 DNM1Q05193 864 aaKnown RBP16.88■□□□□ 0.29
PGBD2-202ENST00000355360 GCKRQ14397 625 aa16.88■□□□□ 0.29
PGBD2-202ENST00000355360 CREB3L3Q68CJ9 461 aa16.88■□□□□ 0.29
PGBD2-202ENST00000355360 SEC62Q99442 399 aaKnown RBP16.88■□□□□ 0.29
PGBD2-202ENST00000355360 MBD3O95983 291 aa16.87■□□□□ 0.29
PGBD2-202ENST00000355360 ZSCAN30Q86W11 494 aa16.87■□□□□ 0.29
PGBD2-202ENST00000355360 EVI5LQ96CN4 794 aa16.87■□□□□ 0.29
PGBD2-202ENST00000355360 GPATCH3Q96I76 525 aa16.87■□□□□ 0.29
PGBD2-202ENST00000355360 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.87■□□□□ 0.29
PGBD2-202ENST00000355360 TPCN1Q9ULQ1 816 aa16.87■□□□□ 0.29
PGBD2-202ENST00000355360 SLIT3O75094 1523 aa16.87■□□□□ 0.29
PGBD2-202ENST00000355360 NECTIN1Q15223 517 aa16.87■□□□□ 0.29
PGBD2-202ENST00000355360 IL17RAQ96F46 866 aa16.87■□□□□ 0.29
PGBD2-202ENST00000355360 C1orf167Q5SNV9 1468 aa16.87■□□□□ 0.29
PGBD2-202ENST00000355360 TATP17735 454 aaPredicted RBP16.87■□□□□ 0.29
PGBD2-202ENST00000355360 RUFY2Q8WXA3 655 aa16.87■□□□□ 0.29
PGBD2-202ENST00000355360 SIPA1L3O60292 1781 aaPredicted RBP16.86■□□□□ 0.29
PGBD2-202ENST00000355360 MSNP26038 577 aaKnown RBP16.86■□□□□ 0.29
PGBD2-202ENST00000355360 TFCP2Q12800 502 aa16.86■□□□□ 0.29
PGBD2-202ENST00000355360 DNAJC2Q99543 621 aaKnown RBP16.86■□□□□ 0.29
PGBD2-202ENST00000355360 CYP46A1Q9Y6A2 500 aa16.86■□□□□ 0.29
PGBD2-202ENST00000355360 PPFIA3O75145 1194 aa16.86■□□□□ 0.29
PGBD2-202ENST00000355360 NEXNQ0ZGT2 675 aa16.86■□□□□ 0.29
PGBD2-202ENST00000355360 ANKRD13DQ6ZTN6 518 aa16.86■□□□□ 0.29
PGBD2-202ENST00000355360 ERC1Q8IUD2 1116 aa16.86■□□□□ 0.29
PGBD2-202ENST00000355360 CRYBG1Q9Y4K1 1723 aa16.85■□□□□ 0.29
PGBD2-202ENST00000355360 F13A1P00488 732 aa16.85■□□□□ 0.29
PGBD2-202ENST00000355360 LARP1Q6PKG0 1096 aaKnown RBP16.85■□□□□ 0.29
PGBD2-202ENST00000355360 NCAPD2Q15021 1401 aa16.85■□□□□ 0.29
PGBD2-202ENST00000355360 TRPM3Q9HCF6 1732 aaPredicted RBP16.85■□□□□ 0.29
PGBD2-202ENST00000355360 PHRF1Q9P1Y6 1649 aaKnown RBP16.85■□□□□ 0.29
PGBD2-202ENST00000355360 SLC27A2O14975 620 aa16.85■□□□□ 0.29
PGBD2-202ENST00000355360 TSPY26PQ9H489 355 aa16.85■□□□□ 0.29
PGBD2-202ENST00000355360 DBNLQ9UJU6 430 aaKnown RBP16.85■□□□□ 0.29
PGBD2-202ENST00000355360 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
PGBD2-202ENST00000355360 ZSWIM6Q9HCJ5 1215 aa16.84■□□□□ 0.29
PGBD2-202ENST00000355360 PDLIM2Q96JY6 352 aa16.84■□□□□ 0.29
PGBD2-202ENST00000355360 LRRC2Q9BYS8 371 aa16.84■□□□□ 0.29
PGBD2-202ENST00000355360 C19orf44Q9H6X5 657 aa16.84■□□□□ 0.29
PGBD2-202ENST00000355360 MTMR6Q9Y217 621 aa16.84■□□□□ 0.29
PGBD2-202ENST00000355360 HCLS1P14317 486 aaPredicted RBP16.83■□□□□ 0.29
PGBD2-202ENST00000355360 ZNF830Q96NB3 372 aaPredicted RBP16.83■□□□□ 0.29
PGBD2-202ENST00000355360 DBNDD2Q9BQY9 259 aa16.83■□□□□ 0.29
PGBD2-202ENST00000355360 METTL22Q9BUU2 404 aaPredicted RBP16.83■□□□□ 0.29
PGBD2-202ENST00000355360 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.83■□□□□ 0.29
PGBD2-202ENST00000355360 COL15A1P39059 1388 aa16.83■□□□□ 0.29
PGBD2-202ENST00000355360 A0A087WZG4 1122 aa16.83■□□□□ 0.28
PGBD2-202ENST00000355360 GIMAP6Q6P9H5 292 aa16.83■□□□□ 0.28
PGBD2-202ENST00000355360 DDX46Q7L014 1031 aaKnown RBP16.83■□□□□ 0.28
PGBD2-202ENST00000355360 CHMP4AQ9BY43 222 aa16.83■□□□□ 0.28
PGBD2-202ENST00000355360 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.28
PGBD2-202ENST00000355360 ATF3P18847 181 aa16.83■□□□□ 0.28
PGBD2-202ENST00000355360 PLCB2Q00722 1185 aa16.83■□□□□ 0.28
PGBD2-202ENST00000355360 PTPN12Q05209 780 aaKnown RBP16.83■□□□□ 0.28
PGBD2-202ENST00000355360 LRP10Q7Z4F1 713 aa16.83■□□□□ 0.28
PGBD2-202ENST00000355360 MAP4K1Q92918 833 aa16.83■□□□□ 0.28
PGBD2-202ENST00000355360 UTYO14607 1347 aa16.82■□□□□ 0.28
PGBD2-202ENST00000355360 ZNF142P52746 1687 aaPredicted RBP16.82■□□□□ 0.28
PGBD2-202ENST00000355360 VPS53Q5VIR6 699 aa16.82■□□□□ 0.28
PGBD2-202ENST00000355360 CDC37L1Q7L3B6 337 aa16.82■□□□□ 0.28
PGBD2-202ENST00000355360 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
PGBD2-202ENST00000355360 USP25Q9UHP3 1055 aa16.82■□□□□ 0.28
PGBD2-202ENST00000355360 FOSBP53539 338 aa16.82■□□□□ 0.28
PGBD2-202ENST00000355360 ZNF330Q9Y3S2 320 aaPredicted RBP16.81■□□□□ 0.28
PGBD2-202ENST00000355360 TTLL7Q6ZT98 887 aa16.81■□□□□ 0.28
PGBD2-202ENST00000355360 SCN11AQ9UI33 1791 aa16.8■□□□□ 0.28
PGBD2-202ENST00000355360 A0A0G2JLW4 131 aa16.8■□□□□ 0.28
PGBD2-202ENST00000355360 CABP4P57796 275 aa16.8■□□□□ 0.28
PGBD2-202ENST00000355360 TMEM94Q12767 1356 aa16.8■□□□□ 0.28
PGBD2-202ENST00000355360 SNRPA1P09661 255 aaKnown RBP16.8■□□□□ 0.28
PGBD2-202ENST00000355360 LMBR1LQ6UX01 489 aa16.8■□□□□ 0.28
PGBD2-202ENST00000355360 ZNF594Q96JF6 807 aaPredicted RBP16.8■□□□□ 0.28
PGBD2-202ENST00000355360 CCDC85AQ96PX6 553 aaPredicted RBP16.8■□□□□ 0.28
PGBD2-202ENST00000355360 EPB41L2O43491 1005 aaKnown RBP16.79■□□□□ 0.28
PGBD2-202ENST00000355360 A1BGP04217 495 aa16.79■□□□□ 0.28
PGBD2-202ENST00000355360 RFX5P48382 616 aaPredicted RBP16.79■□□□□ 0.28
PGBD2-202ENST00000355360 TNNI3KQ59H18 835 aa16.79■□□□□ 0.28
PGBD2-202ENST00000355360 ZBTB3Q9H5J0 574 aa16.79■□□□□ 0.28
PGBD2-202ENST00000355360 TFIP11Q9UBB9 837 aaKnown RBP16.79■□□□□ 0.28
PGBD2-202ENST00000355360 FPGT-TNNI3KV9GXZ4 949 aa16.79■□□□□ 0.28
PGBD2-202ENST00000355360 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.79■□□□□ 0.28
PGBD2-202ENST00000355360 PTMAP06454 111 aaKnown RBP16.79■□□□□ 0.28
PGBD2-202ENST00000355360 LARP1BQ659C4 914 aaKnown RBP16.79■□□□□ 0.28
PGBD2-202ENST00000355360 BLOC1S2Q6QNY1 142 aa16.79■□□□□ 0.28
PGBD2-202ENST00000355360 DDX11Q96FC9 970 aa16.79■□□□□ 0.28
PGBD2-202ENST00000355360 NEUROD6Q96NK8 337 aa16.79■□□□□ 0.28
PGBD2-202ENST00000355360 AFDNP55196 1824 aaKnown RBP16.79■□□□□ 0.28
PGBD2-202ENST00000355360 HSPA2P54652 639 aa16.79■□□□□ 0.28
PGBD2-202ENST00000355360 TIMM10P62072 90 aa16.79■□□□□ 0.28
PGBD2-202ENST00000355360 TOB2Q14106 344 aaPredicted RBP16.79■□□□□ 0.28
PGBD2-202ENST00000355360 R3HCC1Q9Y3T6 440 aaKnown RBP16.79■□□□□ 0.28
PGBD2-202ENST00000355360 NBPF26B4DH59 902 aa16.78■□□□□ 0.28
PGBD2-202ENST00000355360 JAK2O60674 1132 aa16.78■□□□□ 0.28
PGBD2-202ENST00000355360 CAMK4Q16566 473 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms