RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 HCLS1P14317 486 aaPredicted RBP11.43□□□□□ -0.58
GABPA-201ENST00000354828 IL15P40933 162 aaPredicted RBP11.43□□□□□ -0.58
GABPA-201ENST00000354828 NAA16Q6N069 864 aaPredicted RBP11.43□□□□□ -0.58
GABPA-201ENST00000354828 ARHGAP31Q2M1Z3 1444 aa11.43□□□□□ -0.58
GABPA-201ENST00000354828 UFL1O94874 794 aa11.43□□□□□ -0.58
GABPA-201ENST00000354828 ZFYVE27Q5T4F4 411 aa11.43□□□□□ -0.58
GABPA-201ENST00000354828 FAM89AQ96GI7 184 aa11.43□□□□□ -0.58
GABPA-201ENST00000354828 LGR6Q9HBX8 967 aa11.43□□□□□ -0.58
GABPA-201ENST00000354828 BMP2KQ9NSY1 1161 aaPredicted RBP11.43□□□□□ -0.58
GABPA-201ENST00000354828 SH3TC1Q8TE82 1336 aa11.43□□□□□ -0.58
GABPA-201ENST00000354828 KINO60870 393 aaKnown RBP11.43□□□□□ -0.58
GABPA-201ENST00000354828 JAG2Q9Y219 1238 aa11.43□□□□□ -0.58
GABPA-201ENST00000354828 CCDC196A0A1B0GTZ2 297 aa11.43□□□□□ -0.58
GABPA-201ENST00000354828 CASTP20810 708 aaKnown RBP11.43□□□□□ -0.58
GABPA-201ENST00000354828 KRT24Q2M2I5 525 aa11.43□□□□□ -0.58
GABPA-201ENST00000354828 VAT1LQ9HCJ6 419 aa11.43□□□□□ -0.58
GABPA-201ENST00000354828 DDX21Q9NR30 783 aaKnown RBP eCLIP11.42□□□□□ -0.58
GABPA-201ENST00000354828 LARP1BQ659C4 914 aaKnown RBP11.42□□□□□ -0.58
GABPA-201ENST00000354828 SLC12A7Q9Y666 1083 aa11.42□□□□□ -0.58
GABPA-201ENST00000354828 PTPRTO14522 1441 aa11.42□□□□□ -0.58
GABPA-201ENST00000354828 PRDM15P57071 1507 aaPredicted RBP11.42□□□□□ -0.58
GABPA-201ENST00000354828 CERKQ8TCT0 537 aa11.42□□□□□ -0.58
GABPA-201ENST00000354828 KIAA0232Q92628 1395 aa11.42□□□□□ -0.58
GABPA-201ENST00000354828 EVI5LQ96CN4 794 aa11.42□□□□□ -0.58
GABPA-201ENST00000354828 BEGAINQ9BUH8 593 aa11.42□□□□□ -0.58
GABPA-201ENST00000354828 CATIPQ7Z7H3 387 aa11.42□□□□□ -0.58
GABPA-201ENST00000354828 STX8Q9UNK0 236 aa11.42□□□□□ -0.58
GABPA-201ENST00000354828 DPP8Q6V1X1 898 aaPredicted RBP11.41□□□□□ -0.58
GABPA-201ENST00000354828 MEIS3Q99687 375 aa11.41□□□□□ -0.58
GABPA-201ENST00000354828 TNNI2P48788 182 aa11.41□□□□□ -0.58
GABPA-201ENST00000354828 DDX11Q96FC9 970 aa11.41□□□□□ -0.58
GABPA-201ENST00000354828 FIBPO43427 364 aa11.41□□□□□ -0.58
GABPA-201ENST00000354828 NAP1L1P55209 391 aaKnown RBP11.41□□□□□ -0.58
GABPA-201ENST00000354828 SEPT12Q8IYM1 358 aa11.41□□□□□ -0.58
GABPA-201ENST00000354828 KAT14Q9H8E8 782 aa11.41□□□□□ -0.58
GABPA-201ENST00000354828 EHMT1Q9H9B1 1298 aa11.41□□□□□ -0.58
GABPA-201ENST00000354828 SPATA31E1Q6ZUB1 1445 aa11.41□□□□□ -0.58
GABPA-201ENST00000354828 ME1P48163 572 aa11.4□□□□□ -0.58
GABPA-201ENST00000354828 HAND2P61296 217 aa11.4□□□□□ -0.58
GABPA-201ENST00000354828 UNC5CLQ8IV45 518 aa11.4□□□□□ -0.58
GABPA-201ENST00000354828 ZSCAN31Q96LW9 406 aaPredicted RBP11.4□□□□□ -0.58
GABPA-201ENST00000354828 MFSD6Q6ZSS7 791 aa11.4□□□□□ -0.58
GABPA-201ENST00000354828 ARHGAP27Q6ZUM4 889 aa11.4□□□□□ -0.58
GABPA-201ENST00000354828 POLR3AO14802 1390 aaPredicted RBP11.4□□□□□ -0.58
GABPA-201ENST00000354828 ERVV-2B6SEH9 535 aa11.4□□□□□ -0.58
GABPA-201ENST00000354828 RHPN1Q8TCX5 695 aa11.4□□□□□ -0.58
GABPA-201ENST00000354828 VTI1AQ96AJ9 217 aa11.4□□□□□ -0.58
GABPA-201ENST00000354828 MPHOSPH6Q99547 160 aaKnown RBP11.4□□□□□ -0.58
GABPA-201ENST00000354828 RSPH6AQ9H0K4 717 aa11.4□□□□□ -0.58
GABPA-201ENST00000354828 GGA1Q9UJY5 639 aa11.4□□□□□ -0.58
GABPA-201ENST00000354828 PLXNC1O60486 1568 aa11.4□□□□□ -0.58
GABPA-201ENST00000354828 IL13P35225 146 aa11.4□□□□□ -0.59
GABPA-201ENST00000354828 PPP4R3AQ6IN85 833 aa11.4□□□□□ -0.59
GABPA-201ENST00000354828 TMEM87AQ8NBN3 555 aa11.39□□□□□ -0.59
GABPA-201ENST00000354828 PLBD2Q8NHP8 589 aa11.39□□□□□ -0.59
GABPA-201ENST00000354828 NAT10Q9H0A0 1025 aaKnown RBP11.39□□□□□ -0.59
GABPA-201ENST00000354828 PHAXQ9H814 394 aaKnown RBP11.39□□□□□ -0.59
GABPA-201ENST00000354828 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
GABPA-201ENST00000354828 TSHZ2Q9NRE2 1034 aa11.39□□□□□ -0.59
GABPA-201ENST00000354828 FAM13BQ9NYF5 915 aa11.39□□□□□ -0.59
GABPA-201ENST00000354828 MAGEC2Q9UBF1 373 aaPredicted RBP11.39□□□□□ -0.59
GABPA-201ENST00000354828 LDHBP07195 334 aaKnown RBP11.39□□□□□ -0.59
GABPA-201ENST00000354828 TSPY3P0CV98 308 aa11.39□□□□□ -0.59
GABPA-201ENST00000354828 TSPY8P0CW00 308 aa11.39□□□□□ -0.59
GABPA-201ENST00000354828 EAPPQ56P03 285 aaPredicted RBP11.39□□□□□ -0.59
GABPA-201ENST00000354828 C20orf194Q5TEA3 1177 aa11.39□□□□□ -0.59
GABPA-201ENST00000354828 PDCL3Q9H2J4 239 aa11.39□□□□□ -0.59
GABPA-201ENST00000354828 BIN2Q9UBW5 565 aaPredicted RBP11.39□□□□□ -0.59
GABPA-201ENST00000354828 SLC4A4Q9Y6R1 1079 aa11.39□□□□□ -0.59
GABPA-201ENST00000354828 SUPT20HQ8NEM7 779 aa11.39□□□□□ -0.59
GABPA-201ENST00000354828 PA2G4Q9UQ80 394 aaKnown RBP11.39□□□□□ -0.59
GABPA-201ENST00000354828 PER1O15534 1290 aaPredicted RBP11.38□□□□□ -0.59
GABPA-201ENST00000354828 BRINP3Q76B58 766 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 NIM1KQ8IY84 436 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 CCAR2Q8N163 923 aaKnown RBP11.38□□□□□ -0.59
GABPA-201ENST00000354828 ZNF496Q96IT1 587 aaPredicted RBP11.38□□□□□ -0.59
GABPA-201ENST00000354828 PLCG2P16885 1265 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 ALDH1B1P30837 517 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 SLC9C2Q5TAH2 1124 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 TRMT1LQ7Z2T5 733 aaKnown RBP11.38□□□□□ -0.59
GABPA-201ENST00000354828 ARHGAP45Q92619 1136 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 GOLGA8AA7E2F4 631 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 GOLGA8BA8MQT2 603 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 KIF5BP33176 963 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 PDE6BP35913 854 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.38□□□□□ -0.596e-14■■■■■ 335.4
GABPA-201ENST00000354828 PLS1Q14651 629 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 SYCP1Q15431 976 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 TSHZ3Q63HK5 1081 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 DPY19L2Q6NUT2 758 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 TSPYL6Q8N831 410 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 AFF2P51816 1311 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 PARD3Q8TEW0 1356 aa11.38□□□□□ -0.59
GABPA-201ENST00000354828 HMGB1P09429 215 aaKnown RBP11.37□□□□□ -0.59
GABPA-201ENST00000354828 CARD10Q9BWT7 1032 aa11.37□□□□□ -0.59
GABPA-201ENST00000354828 STIM1Q13586 685 aa11.37□□□□□ -0.59
GABPA-201ENST00000354828 TMEM67Q5HYA8 995 aa11.37□□□□□ -0.59
GABPA-201ENST00000354828 UPF3BQ9BZI7 483 aaKnown RBP11.37□□□□□ -0.59
GABPA-201ENST00000354828 GLIPR1L2Q4G1C9 344 aa11.37□□□□□ -0.59
GABPA-201ENST00000354828 MRPL50Q8N5N7 158 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms