RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ENOX2Q16206 610 aaKnown RBP2.45□□□□□ -2.02
BRCA1-202ENST00000354071 STAC3Q96MF2 364 aa2.45□□□□□ -2.02
BRCA1-202ENST00000354071 TRIM56Q9BRZ2 755 aaKnown RBP2.45□□□□□ -2.02
BRCA1-202ENST00000354071 HIRIP3Q9BW71 556 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-202ENST00000354071 ZSWIM4Q9H7M6 989 aa2.45□□□□□ -2.02
BRCA1-202ENST00000354071 ATP13A2Q9NQ11 1180 aa2.45□□□□□ -2.02
BRCA1-202ENST00000354071 MRPL42Q9Y6G3 142 aaKnown RBP2.45□□□□□ -2.02
BRCA1-202ENST00000354071 SBNO2Q9Y2G9 1366 aa2.45□□□□□ -2.02
BRCA1-202ENST00000354071 CD2BP2O95400 341 aaKnown RBP2.45□□□□□ -2.02
BRCA1-202ENST00000354071 TCEAL1Q15170 157 aa2.45□□□□□ -2.02
BRCA1-202ENST00000354071 C8orf34Q49A92 452 aa2.45□□□□□ -2.02
BRCA1-202ENST00000354071 CC2D2BQ6DHV5 1058 aa2.45□□□□□ -2.02
BRCA1-202ENST00000354071 GJD3Q8N144 294 aa2.45□□□□□ -2.02
BRCA1-202ENST00000354071 NUDT16Q96DE0 195 aaKnown RBP2.45□□□□□ -2.02
BRCA1-202ENST00000354071 TRIM47Q96LD4 638 aa2.45□□□□□ -2.02
BRCA1-202ENST00000354071 KANSL2Q9H9L4 492 aa2.45□□□□□ -2.02
BRCA1-202ENST00000354071 SRA1Q9HD15 236 aaKnown RBP2.45□□□□□ -2.02
BRCA1-202ENST00000354071 A6NJY4 79 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 M0R2N6 131 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 EIF1AYO14602 144 aaKnown RBP2.44□□□□□ -2.02
BRCA1-202ENST00000354071 PDGFAP04085 211 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 POLR3DP05423 398 aaPredicted RBP2.44□□□□□ -2.02
BRCA1-202ENST00000354071 PTGIRP43119 386 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 CTSOP43234 321 aaPredicted RBP2.44□□□□□ -2.02
BRCA1-202ENST00000354071 ZAP70P43403 619 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 RNF144AP50876 292 aaPredicted RBP2.44□□□□□ -2.02
BRCA1-202ENST00000354071 SF3A1Q15459 793 aaKnown RBP2.44□□□□□ -2.02
BRCA1-202ENST00000354071 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.44□□□□□ -2.02
BRCA1-202ENST00000354071 EML1O00423 815 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 TXLNAP40222 546 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 MCCD1P59942 119 aaPredicted RBP2.44□□□□□ -2.02
BRCA1-202ENST00000354071 RNF20Q5VTR2 975 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 ALDH16A1Q8IZ83 802 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 AGBL1Q96MI9 1066 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 DDX41Q9UJV9 622 aaKnown RBP2.44□□□□□ -2.02
BRCA1-202ENST00000354071 SPATA31C2B4DYI2 1134 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 CTC1Q2NKJ3 1217 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 ZNF280CQ8ND82 737 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 CNKSR1Q969H4 720 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 COL26A1Q96A83 441 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 TGIF2Q9GZN2 237 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 INPP5FQ9Y2H2 1132 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 KIAA1210Q9ULL0 1709 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 HMGB1P09429 215 aaKnown RBP2.44□□□□□ -2.02
BRCA1-202ENST00000354071 ATP2B1P20020 1258 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 GNA15P30679 374 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 TRIP4Q15650 581 aaPredicted RBP2.44□□□□□ -2.02
BRCA1-202ENST00000354071 USP48Q86UV5 1035 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 ZNF232Q9UNY5 417 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 TBX22Q9Y458 520 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 MRVI1Q9Y6F6 885 aa2.44□□□□□ -2.02
BRCA1-202ENST00000354071 ERBB4Q15303 1308 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 FBXO24O75426 580 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 SMTNP53814 917 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 COL19A1Q14993 1142 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 TLR1Q15399 786 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 CCDC116Q8IYX3 515 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 L3MBTL2Q969R5 705 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 HSH2DQ96JZ2 352 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 SLC35F4A4IF30 521 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 GAS6Q14393 721 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 GPR161Q8N6U8 529 aaKnown RBP2.43□□□□□ -2.02
BRCA1-202ENST00000354071 GMPR2Q9P2T1 348 aaKnown RBP2.43□□□□□ -2.02
BRCA1-202ENST00000354071 GFRA3O60609 400 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 RAB11FIP3O75154 756 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 ZIC2O95409 532 aaPredicted RBP2.43□□□□□ -2.02
BRCA1-202ENST00000354071 FGRP09769 529 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 TREML1Q86YW5 311 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 SPACA7Q96KW9 195 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 PHACTR1Q9C0D0 580 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 ZNF395Q9H8N7 513 aaPredicted RBP2.43□□□□□ -2.02
BRCA1-202ENST00000354071 GGT7Q9UJ14 662 aa2.43□□□□□ -2.02
BRCA1-202ENST00000354071 CCDC85CA6NKD9 419 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 ALDH1A1P00352 501 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 PAK2Q13177 524 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 CLN3Q13286 438 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 NXPE4Q6UWF7 544 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 EHBP1Q8NDI1 1231 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 CRELD1Q96HD1 420 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 DMRTB1Q96MA1 342 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 ZFP42Q96MM3 310 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 NPHS2Q9NP85 383 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 EGFLAMQ63HQ2 1017 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 LINC00528Q8N1L1 170 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 STAG2Q8N3U4 1231 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 ALKBH8Q96BT7 664 aaKnown RBP2.42□□□□□ -2.02
BRCA1-202ENST00000354071 IFT43Q96FT9 208 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 CSRNP1Q96S65 589 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 NEUROD4Q9HD90 331 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 LATS2Q9NRM7 1088 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 ZBTB24O43167 697 aaPredicted RBP2.42□□□□□ -2.02
BRCA1-202ENST00000354071 ADH1AP07327 375 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 NOS2P35228 1153 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 PSMA6P60900 246 aaKnown RBP2.42□□□□□ -2.02
BRCA1-202ENST00000354071 MRPL14Q6P1L8 145 aaKnown RBP2.42□□□□□ -2.02
BRCA1-202ENST00000354071 NANOS1Q8WY41 292 aaKnown RBP2.42□□□□□ -2.02
BRCA1-202ENST00000354071 ZNF592Q92610 1267 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 CABP1Q9NZU7 370 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 TMEM63CQ9P1W3 806 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 KLHL42Q9P2K6 505 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms