RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 RHPN1Q8TCX5 695 aa23.04■■□□□ 1.28
PTN-201ENST00000348225 CCNL1Q9UK58 526 aaPredicted RBP23.04■■□□□ 1.28
PTN-201ENST00000348225 PCCAP05165 728 aaPredicted RBP23.04■■□□□ 1.28
PTN-201ENST00000348225 RC3H1Q5TC82 1133 aaKnown RBP23.03■■□□□ 1.28
PTN-201ENST00000348225 NLRP10Q86W26 655 aa23.03■■□□□ 1.28
PTN-201ENST00000348225 ZBTB38Q8NAP3 1195 aaPredicted RBP23.03■■□□□ 1.28
PTN-201ENST00000348225 G3BP1Q13283 466 aaKnown RBP eCLIP23.02■■□□□ 1.28
PTN-201ENST00000348225 TTC22Q5TAA0 569 aa23.02■■□□□ 1.28
PTN-201ENST00000348225 OTUD7AQ8TE49 926 aaPredicted RBP23.02■■□□□ 1.28
PTN-201ENST00000348225 OSBPL3Q9H4L5 887 aa23.02■■□□□ 1.28
PTN-201ENST00000348225 BCORQ6W2J9 1755 aa23.02■■□□□ 1.28
PTN-201ENST00000348225 GPTP24298 496 aa23.01■■□□□ 1.27
PTN-201ENST00000348225 FOXO4P98177 505 aa23.01■■□□□ 1.27
PTN-201ENST00000348225 PA2G4Q9UQ80 394 aaKnown RBP23.01■■□□□ 1.27
PTN-201ENST00000348225 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
PTN-201ENST00000348225 CDHR2Q9BYE9 1310 aa23.01■■□□□ 1.27
PTN-201ENST00000348225 RTL5Q5HYW3 569 aaPredicted RBP23■■□□□ 1.27
PTN-201ENST00000348225 LMBR1LQ6UX01 489 aa23■■□□□ 1.27
PTN-201ENST00000348225 COPRSQ9NQ92 184 aa23■■□□□ 1.27
PTN-201ENST00000348225 ZNF652Q9Y2D9 606 aa23■■□□□ 1.27
PTN-201ENST00000348225 SALL3Q9BXA9 1300 aa23■■□□□ 1.27
PTN-201ENST00000348225 CAMTA2O94983 1202 aa23■■□□□ 1.27
PTN-201ENST00000348225 ZNF34Q8IZ26 560 aa23■■□□□ 1.27
PTN-201ENST00000348225 IL1RAPL2Q9NP60 686 aa23■■□□□ 1.27
PTN-201ENST00000348225 MX1P20591 662 aa22.99■■□□□ 1.27
PTN-201ENST00000348225 PDE1AP54750 535 aa22.99■■□□□ 1.27
PTN-201ENST00000348225 PLA2G12BQ9BX93 195 aa22.99■■□□□ 1.27
PTN-201ENST00000348225 AOX1Q06278 1338 aa22.98■■□□□ 1.27
PTN-201ENST00000348225 RGL2O15211 777 aa22.98■■□□□ 1.27
PTN-201ENST00000348225 KCNQ4P56696 695 aa22.98■■□□□ 1.27
PTN-201ENST00000348225 CLASRPQ8N2M8 674 aaKnown RBP22.98■■□□□ 1.27
PTN-201ENST00000348225 CHMP3Q9Y3E7 222 aa22.98■■□□□ 1.27
PTN-201ENST00000348225 GSPT1P15170 499 aaKnown RBP22.97■■□□□ 1.27
PTN-201ENST00000348225 RXRBP28702 533 aa22.97■■□□□ 1.27
PTN-201ENST00000348225 ANP32AP39687 249 aaKnown RBP22.97■■□□□ 1.27
PTN-201ENST00000348225 RFX5P48382 616 aaPredicted RBP22.97■■□□□ 1.27
PTN-201ENST00000348225 PARP10Q53GL7 1025 aa22.97■■□□□ 1.27
PTN-201ENST00000348225 FAM89AQ96GI7 184 aa22.97■■□□□ 1.27
PTN-201ENST00000348225 RPS6KA4O75676 772 aa22.97■■□□□ 1.27
PTN-201ENST00000348225 UPF2Q9HAU5 1272 aaKnown RBP22.97■■□□□ 1.27
PTN-201ENST00000348225 STAP2Q9UGK3 403 aa22.97■■□□□ 1.27
PTN-201ENST00000348225 SCN7AQ01118 1682 aa22.96■■□□□ 1.27
PTN-201ENST00000348225 C4BP0C0L5 1744 aa22.96■■□□□ 1.27
PTN-201ENST00000348225 PTPN12Q05209 780 aaKnown RBP22.96■■□□□ 1.27
PTN-201ENST00000348225 CLEC4GQ6UXB4 293 aa22.96■■□□□ 1.27
PTN-201ENST00000348225 TRMT112Q9UI30 125 aaKnown RBP22.96■■□□□ 1.27
PTN-201ENST00000348225 UBN2Q6ZU65 1347 aa22.95■■□□□ 1.26
PTN-201ENST00000348225 SIL1Q9H173 461 aa22.95■■□□□ 1.26
PTN-201ENST00000348225 RTCBQ9Y3I0 505 aaKnown RBP22.94■■□□□ 1.26
PTN-201ENST00000348225 GNPATO15228 680 aa22.93■■□□□ 1.26
PTN-201ENST00000348225 EIF5BO60841 1220 aaKnown RBP22.93■■□□□ 1.26
PTN-201ENST00000348225 CDC45O75419 566 aa22.93■■□□□ 1.26
PTN-201ENST00000348225 TRIM37O94972 964 aa22.93■■□□□ 1.26
PTN-201ENST00000348225 HMGB2P26583 209 aaKnown RBP22.93■■□□□ 1.26
PTN-201ENST00000348225 SLC27A3Q5K4L6 730 aa22.93■■□□□ 1.26
PTN-201ENST00000348225 NUTM1Q86Y26 1132 aa22.93■■□□□ 1.26
PTN-201ENST00000348225 KLHDC4Q8TBB5 520 aa22.93■■□□□ 1.26
PTN-201ENST00000348225 MYH3P11055 1940 aa22.93■■□□□ 1.26
PTN-201ENST00000348225 SASH1O94885 1247 aa22.93■■□□□ 1.26
PTN-201ENST00000348225 GPATCH3Q96I76 525 aa22.93■■□□□ 1.26
PTN-201ENST00000348225 AK7Q96M32 723 aa22.93■■□□□ 1.26
PTN-201ENST00000348225 IRS4O14654 1257 aaPredicted RBP22.92■■□□□ 1.26
PTN-201ENST00000348225 IFIT2P09913 472 aaKnown RBP22.92■■□□□ 1.26
PTN-201ENST00000348225 CCDC57Q2TAC2 916 aa22.92■■□□□ 1.26
PTN-201ENST00000348225 UTP14AQ9BVJ6 771 aaKnown RBP22.92■■□□□ 1.26
PTN-201ENST00000348225 NIP7Q9Y221 180 aaKnown RBP eCLIP22.92■■□□□ 1.26
PTN-201ENST00000348225 TUBGCP6Q96RT7 1819 aa22.91■■□□□ 1.26
PTN-201ENST00000348225 SEC24BO95487 1268 aa22.91■■□□□ 1.26
PTN-201ENST00000348225 CSF1RP07333 972 aa22.91■■□□□ 1.26
PTN-201ENST00000348225 HSP90B1P14625 803 aaKnown RBP22.91■■□□□ 1.26
PTN-201ENST00000348225 TTC41PQ6P2S7 1318 aa22.91■■□□□ 1.26
PTN-201ENST00000348225 SH3TC1Q8TE82 1336 aa22.91■■□□□ 1.26
PTN-201ENST00000348225 USP42Q9H9J4 1324 aaKnown RBP22.91■■□□□ 1.26
PTN-201ENST00000348225 PDE8AO60658 829 aa22.9■■□□□ 1.26
PTN-201ENST00000348225 NARFQ9UHQ1 456 aa22.9■■□□□ 1.26
PTN-201ENST00000348225 SDSP20132 328 aa22.9■■□□□ 1.26
PTN-201ENST00000348225 CTSWP56202 376 aa22.9■■□□□ 1.26
PTN-201ENST00000348225 SUSD4Q5VX71 490 aa22.9■■□□□ 1.26
PTN-201ENST00000348225 AACSQ86V21 672 aa22.9■■□□□ 1.26
PTN-201ENST00000348225 LAMB2P55268 1798 aa22.89■■□□□ 1.25
PTN-201ENST00000348225 CASC1Q6TDU7 716 aa22.89■■□□□ 1.25
PTN-201ENST00000348225 FBXO3Q9UK99 471 aa22.89■■□□□ 1.25
PTN-201ENST00000348225 ERC2O15083 957 aa22.88■■□□□ 1.25
PTN-201ENST00000348225 ZPR1O75312 459 aa22.88■■□□□ 1.25
PTN-201ENST00000348225 CIAO1O76071 339 aa22.88■■□□□ 1.25
PTN-201ENST00000348225 IL15P40933 162 aaPredicted RBP22.88■■□□□ 1.25
PTN-201ENST00000348225 IFIT5Q13325 482 aaKnown RBP22.88■■□□□ 1.25
PTN-201ENST00000348225 TSHZ3Q63HK5 1081 aa22.88■■□□□ 1.25
PTN-201ENST00000348225 TBC1D9Q6ZT07 1266 aa22.88■■□□□ 1.25
PTN-201ENST00000348225 LRRC4BQ9NT99 713 aa22.87■■□□□ 1.25
PTN-201ENST00000348225 EYA2O00167 538 aa22.86■■□□□ 1.25
PTN-201ENST00000348225 NTSR2O95665 410 aa22.86■■□□□ 1.25
PTN-201ENST00000348225 TAF7LQ5H9L4 462 aa22.86■■□□□ 1.25
PTN-201ENST00000348225 SYNE4Q8N205 404 aa22.86■■□□□ 1.25
PTN-201ENST00000348225 ECHDC1Q9NTX5 307 aa22.86■■□□□ 1.25
PTN-201ENST00000348225 C4AP0C0L4 1744 aa22.86■■□□□ 1.25
PTN-201ENST00000348225 GLRX3O76003 335 aaKnown RBP22.86■■□□□ 1.25
PTN-201ENST00000348225 ADRA2BP18089 450 aa22.86■■□□□ 1.25
PTN-201ENST00000348225 MFAP1P55081 439 aaKnown RBP22.86■■□□□ 1.25
PTN-201ENST00000348225 USPL1Q5W0Q7 1092 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms