RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SPATA31A3Q5VYP0 1347 aa19.34■□□□□ 0.69
SMARCA4-201ENST00000344626 RSPH6AQ9H0K4 717 aa19.34■□□□□ 0.69
SMARCA4-201ENST00000344626 STK3Q13188 491 aa19.34■□□□□ 0.69
SMARCA4-201ENST00000344626 WDR17Q8IZU2 1322 aa19.34■□□□□ 0.69
SMARCA4-201ENST00000344626 EVI5LQ96CN4 794 aa19.34■□□□□ 0.69
SMARCA4-201ENST00000344626 SDF4Q9BRK5 362 aa19.34■□□□□ 0.69
SMARCA4-201ENST00000344626 PDIA4P13667 645 aaKnown RBP19.33■□□□□ 0.69
SMARCA4-201ENST00000344626 PHKG2P15735 406 aa19.33■□□□□ 0.69
SMARCA4-201ENST00000344626 STK38Q15208 465 aa19.33■□□□□ 0.69
SMARCA4-201ENST00000344626 UFL1O94874 794 aa19.33■□□□□ 0.68
SMARCA4-201ENST00000344626 PHAXQ9H814 394 aaKnown RBP19.33■□□□□ 0.68
SMARCA4-201ENST00000344626 PICALMQ13492 652 aa19.33■□□□□ 0.68
SMARCA4-201ENST00000344626 NLGN1Q8N2Q7 840 aa19.33■□□□□ 0.68
SMARCA4-201ENST00000344626 NAT10Q9H0A0 1025 aaKnown RBP19.33■□□□□ 0.68
SMARCA4-201ENST00000344626 DPP8Q6V1X1 898 aaPredicted RBP19.32■□□□□ 0.68
SMARCA4-201ENST00000344626 PRR36Q9H6K5 1346 aa19.32■□□□□ 0.68
SMARCA4-201ENST00000344626 IQCA1Q86XH1 822 aa19.32■□□□□ 0.68
SMARCA4-201ENST00000344626 JCADQ9P266 1359 aa19.31■□□□□ 0.68
SMARCA4-201ENST00000344626 KRT18P05783 430 aaKnown RBP19.31■□□□□ 0.68
SMARCA4-201ENST00000344626 HMGB1P09429 215 aaKnown RBP19.31■□□□□ 0.68
SMARCA4-201ENST00000344626 ZNF76P36508 570 aa19.31■□□□□ 0.68
SMARCA4-201ENST00000344626 TSPYL6Q8N831 410 aa19.31■□□□□ 0.68
SMARCA4-201ENST00000344626 BEGAINQ9BUH8 593 aa19.31■□□□□ 0.68
SMARCA4-201ENST00000344626 CCDC196A0A1B0GTZ2 297 aa19.31■□□□□ 0.68
SMARCA4-201ENST00000344626 EAPPQ56P03 285 aaPredicted RBP19.31■□□□□ 0.68
SMARCA4-201ENST00000344626 MEIS3Q99687 375 aa19.31■□□□□ 0.68
SMARCA4-201ENST00000344626 ASAP1Q9ULH1 1129 aa19.31■□□□□ 0.68
SMARCA4-201ENST00000344626 ADGRL3Q9HAR2 1447 aa19.31■□□□□ 0.68
SMARCA4-201ENST00000344626 SEC63Q9UGP8 760 aaKnown RBP19.3■□□□□ 0.68
SMARCA4-201ENST00000344626 IL15P40933 162 aaPredicted RBP19.3■□□□□ 0.68
SMARCA4-201ENST00000344626 ZNF213O14771 459 aa19.3■□□□□ 0.68
SMARCA4-201ENST00000344626 MRPL50Q8N5N7 158 aaKnown RBP19.3■□□□□ 0.68
SMARCA4-201ENST00000344626 ABCC3O15438 1527 aa19.3■□□□□ 0.68
SMARCA4-201ENST00000344626 ZNF526Q8TF50 670 aaPredicted RBP19.29■□□□□ 0.68
SMARCA4-201ENST00000344626 ANKRD2Q9GZV1 360 aa19.29■□□□□ 0.68
SMARCA4-201ENST00000344626 DEKP35659 375 aaKnown RBP19.29■□□□□ 0.68
SMARCA4-201ENST00000344626 DPY19L2Q6NUT2 758 aa19.29■□□□□ 0.68
SMARCA4-201ENST00000344626 KINO60870 393 aaKnown RBP19.29■□□□□ 0.68
SMARCA4-201ENST00000344626 EPS15P42566 896 aa19.29■□□□□ 0.68
SMARCA4-201ENST00000344626 KDM5CP41229 1560 aa19.29■□□□□ 0.68
SMARCA4-201ENST00000344626 HOXB7P09629 217 aa19.28■□□□□ 0.68
SMARCA4-201ENST00000344626 GJD4Q96KN9 370 aaPredicted RBP19.28■□□□□ 0.68
SMARCA4-201ENST00000344626 KDM4FA0A1W2PPD8 638 aa19.28■□□□□ 0.68
SMARCA4-201ENST00000344626 PTPRMP28827 1452 aa19.28■□□□□ 0.68
SMARCA4-201ENST00000344626 CYP7A1P22680 504 aa19.28■□□□□ 0.68
SMARCA4-201ENST00000344626 CTCFLQ8NI51 663 aaPredicted RBP19.27■□□□□ 0.68
SMARCA4-201ENST00000344626 WDR33Q9C0J8 1336 aaKnown RBP19.27■□□□□ 0.68
SMARCA4-201ENST00000344626 PRDM15P57071 1507 aaPredicted RBP19.27■□□□□ 0.68
SMARCA4-201ENST00000344626 LETM1O95202 739 aaPredicted RBP19.27■□□□□ 0.68
SMARCA4-201ENST00000344626 PLBD2Q8NHP8 589 aa19.27■□□□□ 0.68
SMARCA4-201ENST00000344626 K7ELQ4 463 aaPredicted RBP19.27■□□□□ 0.67
SMARCA4-201ENST00000344626 LARP1BQ659C4 914 aaKnown RBP19.27■□□□□ 0.67
SMARCA4-201ENST00000344626 NAA16Q6N069 864 aaPredicted RBP19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 CCDC82Q8N4S0 544 aa19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 PTPRTO14522 1441 aa19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 CASTP20810 708 aaKnown RBP19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 PDE6BP35913 854 aa19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 C2CD5Q86YS7 1000 aa19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 CRNKL1Q9BZJ0 848 aaKnown RBP19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 MYOM2P54296 1465 aa19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 C20orf194Q5TEA3 1177 aa19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 USPL1Q5W0Q7 1092 aa19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 GGA1Q9UJY5 639 aa19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 PA2G4Q9UQ80 394 aaKnown RBP19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 PDE4BQ07343 736 aa19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 NIM1KQ8IY84 436 aa19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 SBNO2Q9Y2G9 1366 aa19.26■□□□□ 0.67
SMARCA4-201ENST00000344626 PRPF40BQ6NWY9 871 aaKnown RBP19.25■□□□□ 0.67
SMARCA4-201ENST00000344626 ERBB3P21860 1342 aa19.25■□□□□ 0.67
SMARCA4-201ENST00000344626 PPIP5K2O43314 1243 aa19.25■□□□□ 0.67
SMARCA4-201ENST00000344626 ZFYP08048 801 aaPredicted RBP19.25■□□□□ 0.67
SMARCA4-201ENST00000344626 ALDH1B1P30837 517 aa19.25■□□□□ 0.67
SMARCA4-201ENST00000344626 MBD3O95983 291 aa19.25■□□□□ 0.67
SMARCA4-201ENST00000344626 RHPN1Q8TCX5 695 aa19.25■□□□□ 0.67
SMARCA4-201ENST00000344626 USP16Q9Y5T5 823 aa19.25■□□□□ 0.67
SMARCA4-201ENST00000344626 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
SMARCA4-201ENST00000344626 PSDA5PKW4 1024 aaPredicted RBP19.24■□□□□ 0.67
SMARCA4-201ENST00000344626 TSPY2A6NKD2 308 aa19.24■□□□□ 0.67
SMARCA4-201ENST00000344626 PRM3Q9NNZ6 103 aa19.24■□□□□ 0.67
SMARCA4-201ENST00000344626 STX8Q9UNK0 236 aa19.24■□□□□ 0.67
SMARCA4-201ENST00000344626 TNIP1Q15025 636 aa19.24■□□□□ 0.67
SMARCA4-201ENST00000344626 ZBTB7AO95365 584 aa19.24■□□□□ 0.67
SMARCA4-201ENST00000344626 PRKG1Q13976 671 aa19.24■□□□□ 0.67
SMARCA4-201ENST00000344626 FAM13BQ9NYF5 915 aa19.24■□□□□ 0.67
SMARCA4-201ENST00000344626 MAP3K4Q9Y6R4 1608 aa19.23■□□□□ 0.67
SMARCA4-201ENST00000344626 ARHGAP31Q2M1Z3 1444 aa19.23■□□□□ 0.67
SMARCA4-201ENST00000344626 ATP8B2P98198 1209 aa19.23■□□□□ 0.67
SMARCA4-201ENST00000344626 PPP4R3BQ5MIZ7 849 aa19.23■□□□□ 0.67
SMARCA4-201ENST00000344626 INSRP06213 1382 aa19.23■□□□□ 0.67
SMARCA4-201ENST00000344626 VAMP4O75379 141 aa19.23■□□□□ 0.67
SMARCA4-201ENST00000344626 ZHX3Q9H4I2 956 aa19.23■□□□□ 0.67
SMARCA4-201ENST00000344626 EN1Q05925 392 aaPredicted RBP19.22■□□□□ 0.67
SMARCA4-201ENST00000344626 BMP2KQ9NSY1 1161 aaPredicted RBP19.22■□□□□ 0.67
SMARCA4-201ENST00000344626 ITGA6P23229 1130 aa19.22■□□□□ 0.67
SMARCA4-201ENST00000344626 CRKLP46109 303 aaKnown RBP19.22■□□□□ 0.67
SMARCA4-201ENST00000344626 MPNDQ8N594 471 aa19.22■□□□□ 0.67
SMARCA4-201ENST00000344626 PDE8AO60658 829 aa19.21■□□□□ 0.67
SMARCA4-201ENST00000344626 KRT85P78386 507 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms