RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 ANXA1P04083 346 aa25.96■■□□□ 1.75
CEACAM3-201ENST00000344550 NUTM1Q86Y26 1132 aa25.96■■□□□ 1.75
CEACAM3-201ENST00000344550 RTKN2Q8IZC4 609 aa25.96■■□□□ 1.75
CEACAM3-201ENST00000344550 NECTIN2Q92692 538 aa25.96■■□□□ 1.75
CEACAM3-201ENST00000344550 ABCC12Q96J65 1359 aa25.95■■□□□ 1.75
CEACAM3-201ENST00000344550 IL16Q14005 1332 aa25.95■■□□□ 1.75
CEACAM3-201ENST00000344550 ANKRD13DQ6ZTN6 518 aa25.95■■□□□ 1.74
CEACAM3-201ENST00000344550 GLTPD2A6NH11 291 aa25.94■■□□□ 1.74
CEACAM3-201ENST00000344550 PRELPP51888 382 aa25.94■■□□□ 1.74
CEACAM3-201ENST00000344550 AIMP1Q12904 312 aaKnown RBP25.94■■□□□ 1.74
CEACAM3-201ENST00000344550 WWC1Q8IX03 1113 aa25.94■■□□□ 1.74
CEACAM3-201ENST00000344550 NLRP3Q96P20 1036 aa25.94■■□□□ 1.74
CEACAM3-201ENST00000344550 CRAMP1Q96RY5 1269 aa25.94■■□□□ 1.74
CEACAM3-201ENST00000344550 DPY19L2Q6NUT2 758 aa25.93■■□□□ 1.74
CEACAM3-201ENST00000344550 NLRP10Q86W26 655 aa25.93■■□□□ 1.74
CEACAM3-201ENST00000344550 RPGRQ92834 1020 aaKnown RBP25.93■■□□□ 1.74
CEACAM3-201ENST00000344550 RBM17Q96I25 401 aaKnown RBP25.92■■□□□ 1.74
CEACAM3-201ENST00000344550 NMRK2Q9NPI5 230 aa25.92■■□□□ 1.74
CEACAM3-201ENST00000344550 ZNF219Q9P2Y4 722 aaPredicted RBP25.92■■□□□ 1.74
CEACAM3-201ENST00000344550 SENP3-EIF4A1A0A087X0R7 540 aa25.91■■□□□ 1.74
CEACAM3-201ENST00000344550 TRIM28Q13263 835 aaKnown RBP25.91■■□□□ 1.74
CEACAM3-201ENST00000344550 FKBP4Q02790 459 aaKnown RBP eCLIP25.9■■□□□ 1.74
CEACAM3-201ENST00000344550 CCDC30Q5VVM6 783 aa25.9■■□□□ 1.74
CEACAM3-201ENST00000344550 RBM46Q8TBY0 533 aaKnown RBP25.9■■□□□ 1.74
CEACAM3-201ENST00000344550 ANKRD36CQ5JPF3 1778 aa25.9■■□□□ 1.74
CEACAM3-201ENST00000344550 DICER1Q9UPY3 1922 aaKnown RBP25.89■■□□□ 1.74
CEACAM3-201ENST00000344550 C16orf71Q8IYS4 520 aaPredicted RBP25.89■■□□□ 1.74
CEACAM3-201ENST00000344550 TNRC6CQ9HCJ0 1690 aaKnown RBP25.89■■□□□ 1.73
CEACAM3-201ENST00000344550 SH3TC1Q8TE82 1336 aa25.88■■□□□ 1.73
CEACAM3-201ENST00000344550 PSMD1Q99460 953 aa25.88■■□□□ 1.73
CEACAM3-201ENST00000344550 ISCA1Q9BUE6 129 aa25.88■■□□□ 1.73
CEACAM3-201ENST00000344550 VEGFAP15692 232 aaPredicted RBP25.87■■□□□ 1.73
CEACAM3-201ENST00000344550 HSPA6P17066 643 aa25.87■■□□□ 1.73
CEACAM3-201ENST00000344550 WDR63Q8IWG1 891 aa25.87■■□□□ 1.73
CEACAM3-201ENST00000344550 C8orf58Q8NAV2 365 aa25.87■■□□□ 1.73
CEACAM3-201ENST00000344550 TRMT112Q9UI30 125 aaKnown RBP25.87■■□□□ 1.73
CEACAM3-201ENST00000344550 CCDC88AQ3V6T2 1871 aa25.87■■□□□ 1.73
CEACAM3-201ENST00000344550 GOLGA2Q08379 1002 aa25.86■■□□□ 1.73
CEACAM3-201ENST00000344550 FSTL1Q12841 308 aa25.86■■□□□ 1.73
CEACAM3-201ENST00000344550 CACNA1SQ13698 1873 aa25.85■■□□□ 1.73
CEACAM3-201ENST00000344550 TMX4Q9H1E5 349 aaPredicted RBP25.85■■□□□ 1.73
CEACAM3-201ENST00000344550 RRAGCQ9HB90 399 aa25.85■■□□□ 1.73
CEACAM3-201ENST00000344550 TIAM2Q8IVF5 1701 aa25.85■■□□□ 1.73
CEACAM3-201ENST00000344550 BBOX1O75936 387 aa25.84■■□□□ 1.73
CEACAM3-201ENST00000344550 DDX58O95786 925 aaKnown RBP25.84■■□□□ 1.73
CEACAM3-201ENST00000344550 HSP90B1P14625 803 aaKnown RBP25.84■■□□□ 1.73
CEACAM3-201ENST00000344550 SNED1Q8TER0 1413 aa25.83■■□□□ 1.73
CEACAM3-201ENST00000344550 ELL2O00472 640 aaPredicted RBP25.83■■□□□ 1.73
CEACAM3-201ENST00000344550 RIC3Q7Z5B4 369 aa25.82■■□□□ 1.72
CEACAM3-201ENST00000344550 VPS33BQ9H267 617 aa25.82■■□□□ 1.72
CEACAM3-201ENST00000344550 TMC4Q7Z404 712 aa25.81■■□□□ 1.72
CEACAM3-201ENST00000344550 PPEF1O14829 653 aaPredicted RBP25.8■■□□□ 1.72
CEACAM3-201ENST00000344550 C3orf67Q6ZVT6 689 aa25.8■■□□□ 1.72
CEACAM3-201ENST00000344550 SYNE4Q8N205 404 aa25.8■■□□□ 1.72
CEACAM3-201ENST00000344550 STK31Q9BXU1 1019 aa25.8■■□□□ 1.72
CEACAM3-201ENST00000344550 ATP6V0A2Q9Y487 856 aa25.8■■□□□ 1.72
CEACAM3-201ENST00000344550 WDR90Q96KV7 1748 aa25.8■■□□□ 1.72
CEACAM3-201ENST00000344550 IARSP41252 1262 aaKnown RBP25.79■■□□□ 1.72
CEACAM3-201ENST00000344550 DDX46Q7L014 1031 aaKnown RBP25.79■■□□□ 1.72
CEACAM3-201ENST00000344550 TSPYL6Q8N831 410 aa25.79■■□□□ 1.72
CEACAM3-201ENST00000344550 CCDC191Q8NCU4 936 aa25.79■■□□□ 1.72
CEACAM3-201ENST00000344550 TSR2Q969E8 191 aaKnown RBP25.79■■□□□ 1.72
CEACAM3-201ENST00000344550 PHAXQ9H814 394 aaKnown RBP25.79■■□□□ 1.72
CEACAM3-201ENST00000344550 HCLS1P14317 486 aaPredicted RBP25.78■■□□□ 1.72
CEACAM3-201ENST00000344550 APLP1P51693 650 aa25.78■■□□□ 1.72
CEACAM3-201ENST00000344550 SF3B3Q15393 1217 aaKnown RBP25.78■■□□□ 1.72
CEACAM3-201ENST00000344550 TWISTNBQ3B726 338 aaPredicted RBP25.78■■□□□ 1.72
CEACAM3-201ENST00000344550 SMC1BQ8NDV3 1235 aa25.78■■□□□ 1.72
CEACAM3-201ENST00000344550 ZNF277Q9NRM2 450 aaPredicted RBP25.78■■□□□ 1.72
CEACAM3-201ENST00000344550 SP8Q8IXZ3 490 aa25.77■■□□□ 1.72
CEACAM3-201ENST00000344550 ZBTB38Q8NAP3 1195 aaPredicted RBP25.77■■□□□ 1.72
CEACAM3-201ENST00000344550 JDP2Q8WYK2 163 aa25.77■■□□□ 1.72
CEACAM3-201ENST00000344550 ATP5J2-PTCD1G3V325 749 aa25.76■■□□□ 1.71
CEACAM3-201ENST00000344550 OLFM4Q6UX06 510 aa25.76■■□□□ 1.71
CEACAM3-201ENST00000344550 L3MBTL3Q96JM7 780 aaPredicted RBP25.76■■□□□ 1.71
CEACAM3-201ENST00000344550 METTL22Q9BUU2 404 aaPredicted RBP25.76■■□□□ 1.71
CEACAM3-201ENST00000344550 ABCC4O15439 1325 aa25.76■■□□□ 1.71
CEACAM3-201ENST00000344550 IQCA1LA6NCM1 817 aa25.75■■□□□ 1.71
CEACAM3-201ENST00000344550 FZD9O00144 591 aa25.75■■□□□ 1.71
CEACAM3-201ENST00000344550 GRAPQ13588 217 aa25.75■■□□□ 1.71
CEACAM3-201ENST00000344550 SUPT20HQ8NEM7 779 aa25.75■■□□□ 1.71
CEACAM3-201ENST00000344550 GRAPLQ8TC17 118 aaPredicted RBP25.75■■□□□ 1.71
CEACAM3-201ENST00000344550 POTECB2RU33 542 aa25.74■■□□□ 1.71
CEACAM3-201ENST00000344550 KSR2Q6VAB6 950 aa25.74■■□□□ 1.71
CEACAM3-201ENST00000344550 FAM89AQ96GI7 184 aa25.74■■□□□ 1.71
CEACAM3-201ENST00000344550 RTFDC1Q9BY42 306 aaPredicted RBP25.74■■□□□ 1.71
CEACAM3-201ENST00000344550 FANCIQ9NVI1 1328 aa25.73■■□□□ 1.71
CEACAM3-201ENST00000344550 FAM9BQ8IZU0 186 aa25.73■■□□□ 1.71
CEACAM3-201ENST00000344550 DDNO94850 711 aaPredicted RBP25.72■■□□□ 1.71
CEACAM3-201ENST00000344550 PCCAP05165 728 aaPredicted RBP25.72■■□□□ 1.71
CEACAM3-201ENST00000344550 MYH16Q9H6N6 1097 aa25.72■■□□□ 1.71
CEACAM3-201ENST00000344550 CWC25Q9NXE8 425 aaPredicted RBP25.72■■□□□ 1.71
CEACAM3-201ENST00000344550 CEP350Q5VT06 3117 aa25.71■■□□□ 1.71
CEACAM3-201ENST00000344550 IRS4O14654 1257 aaPredicted RBP25.71■■□□□ 1.71
CEACAM3-201ENST00000344550 MYD88Q99836 296 aa25.71■■□□□ 1.71
CEACAM3-201ENST00000344550 LAMB2P55268 1798 aa25.7■■□□□ 1.7
CEACAM3-201ENST00000344550 SLC4A2P04920 1241 aa25.7■■□□□ 1.7
CEACAM3-201ENST00000344550 NEXNQ0ZGT2 675 aa25.7■■□□□ 1.7
CEACAM3-201ENST00000344550 GPC2Q8N158 579 aa25.7■■□□□ 1.7
CEACAM3-201ENST00000344550 MAP3K2Q9Y2U5 619 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms