RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SMIM5Q71RC9 77 aa16.72■□□□□ 0.27
CDC42-202ENST00000344548 PI4K2BQ8TCG2 481 aa16.72■□□□□ 0.27
CDC42-202ENST00000344548 TUBGCP6Q96RT7 1819 aa16.72■□□□□ 0.27
CDC42-202ENST00000344548 KIF6Q6ZMV9 814 aa16.72■□□□□ 0.27
CDC42-202ENST00000344548 FAM89AQ96GI7 184 aa16.72■□□□□ 0.27
CDC42-202ENST00000344548 COL15A1P39059 1388 aa16.71■□□□□ 0.27
CDC42-202ENST00000344548 MAP4K4O95819 1239 aaPredicted RBP16.71■□□□□ 0.27
CDC42-202ENST00000344548 EIF5P55010 431 aaKnown RBP16.71■□□□□ 0.27
CDC42-202ENST00000344548 EAF2Q96CJ1 260 aaPredicted RBP16.71■□□□□ 0.27
CDC42-202ENST00000344548 UPF2Q9HAU5 1272 aaKnown RBP16.71■□□□□ 0.27
CDC42-202ENST00000344548 IL6STP40189 918 aaPredicted RBP16.71■□□□□ 0.27
CDC42-202ENST00000344548 DZIP3Q86Y13 1208 aaKnown RBP16.71■□□□□ 0.27
CDC42-202ENST00000344548 HSP90AB4PQ58FF6 505 aa16.7■□□□□ 0.26
CDC42-202ENST00000344548 CCDC87Q9NVE4 849 aa16.7■□□□□ 0.26
CDC42-202ENST00000344548 TLR7Q9NYK1 1049 aaKnown RBP16.7■□□□□ 0.26
CDC42-202ENST00000344548 COPRSQ9NQ92 184 aa16.7■□□□□ 0.26
CDC42-202ENST00000344548 TRIM28Q13263 835 aaKnown RBP16.69■□□□□ 0.26
CDC42-202ENST00000344548 G3BP1Q13283 466 aaKnown RBP eCLIP16.69■□□□□ 0.26
CDC42-202ENST00000344548 NLRP10Q86W26 655 aa16.68■□□□□ 0.26
CDC42-202ENST00000344548 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
CDC42-202ENST00000344548 ZNF594Q96JF6 807 aaPredicted RBP16.68■□□□□ 0.26
CDC42-202ENST00000344548 CCDC85AQ96PX6 553 aaPredicted RBP16.68■□□□□ 0.26
CDC42-202ENST00000344548 CCDC8Q9H0W5 538 aaPredicted RBP16.68■□□□□ 0.26
CDC42-202ENST00000344548 CHMP3Q9Y3E7 222 aa16.68■□□□□ 0.26
CDC42-202ENST00000344548 UBN2Q6ZU65 1347 aa16.68■□□□□ 0.26
CDC42-202ENST00000344548 CLASRPQ8N2M8 674 aaKnown RBP16.68■□□□□ 0.26
CDC42-202ENST00000344548 RILPL2Q969X0 211 aa16.68■□□□□ 0.26
CDC42-202ENST00000344548 ATRNO75882 1429 aa16.68■□□□□ 0.26
CDC42-202ENST00000344548 ONECUT3O60422 494 aaPredicted RBP16.67■□□□□ 0.26
CDC42-202ENST00000344548 AACSQ86V21 672 aa16.67■□□□□ 0.26
CDC42-202ENST00000344548 KIF2CQ99661 725 aa16.67■□□□□ 0.26
CDC42-202ENST00000344548 NUP98P52948 1817 aa16.67■□□□□ 0.26
CDC42-202ENST00000344548 TRIM6-TRIM34B2RNG4 842 aa16.67■□□□□ 0.26
CDC42-202ENST00000344548 SEPT12Q8IYM1 358 aa16.67■□□□□ 0.26
CDC42-202ENST00000344548 DDRGK1Q96HY6 314 aa16.67■□□□□ 0.26
CDC42-202ENST00000344548 IL25Q9H293 177 aa16.67■□□□□ 0.26
CDC42-202ENST00000344548 RBM25P49756 843 aaKnown RBP16.66■□□□□ 0.26
CDC42-202ENST00000344548 TFCP2Q12800 502 aa16.66■□□□□ 0.26
CDC42-202ENST00000344548 QTRT2Q9H974 415 aaKnown RBP16.66■□□□□ 0.26
CDC42-202ENST00000344548 PCCAP05165 728 aaPredicted RBP16.66■□□□□ 0.26
CDC42-202ENST00000344548 ERC1Q8IUD2 1116 aa16.66■□□□□ 0.26
CDC42-202ENST00000344548 ZBTB38Q8NAP3 1195 aaPredicted RBP16.66■□□□□ 0.26
CDC42-202ENST00000344548 SMARCC1Q92922 1105 aaPredicted RBP16.66■□□□□ 0.26
CDC42-202ENST00000344548 TRPC5Q9UL62 973 aaPredicted RBP16.66■□□□□ 0.26
CDC42-202ENST00000344548 USP42Q9H9J4 1324 aaKnown RBP16.65■□□□□ 0.26
CDC42-202ENST00000344548 ATG9AQ7Z3C6 839 aa16.65■□□□□ 0.26
CDC42-202ENST00000344548 PUS3Q9BZE2 481 aaKnown RBP16.65■□□□□ 0.26
CDC42-202ENST00000344548 CAMTA2O94983 1202 aa16.65■□□□□ 0.26
CDC42-202ENST00000344548 LRRC24Q50LG9 513 aa16.65■□□□□ 0.26
CDC42-202ENST00000344548 ZNF34Q8IZ26 560 aa16.65■□□□□ 0.26
CDC42-202ENST00000344548 BTAF1O14981 1849 aa16.64■□□□□ 0.26
CDC42-202ENST00000344548 COL5A3P25940 1745 aaPredicted RBP16.64■□□□□ 0.26
CDC42-202ENST00000344548 AOX1Q06278 1338 aa16.64■□□□□ 0.25
CDC42-202ENST00000344548 RREB1Q92766 1687 aa16.64■□□□□ 0.25
CDC42-202ENST00000344548 ERVV-1B6SEH8 477 aa16.64■□□□□ 0.25
CDC42-202ENST00000344548 AMIGO3Q86WK7 504 aa16.64■□□□□ 0.25
CDC42-202ENST00000344548 IFIT2P09913 472 aaKnown RBP16.63■□□□□ 0.25
CDC42-202ENST00000344548 CHMLP26374 656 aa16.63■□□□□ 0.25
CDC42-202ENST00000344548 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
CDC42-202ENST00000344548 FAM177BA6PVY3 158 aa16.63■□□□□ 0.25
CDC42-202ENST00000344548 USP26Q9BXU7 913 aa16.63■□□□□ 0.25
CDC42-202ENST00000344548 ECHDC1Q9NTX5 307 aa16.63■□□□□ 0.25
CDC42-202ENST00000344548 ANKRD36CQ5JPF3 1778 aa16.63■□□□□ 0.25
CDC42-202ENST00000344548 TBC1D2Q9BYX2 928 aa16.62■□□□□ 0.25
CDC42-202ENST00000344548 DBNLQ9UJU6 430 aaKnown RBP16.62■□□□□ 0.25
CDC42-202ENST00000344548 SUSD4Q5VX71 490 aa16.62■□□□□ 0.25
CDC42-202ENST00000344548 TRMT112Q9UI30 125 aaKnown RBP16.62■□□□□ 0.25
CDC42-202ENST00000344548 TTC41PQ6P2S7 1318 aa16.62■□□□□ 0.25
CDC42-202ENST00000344548 CSF1RP07333 972 aa16.61■□□□□ 0.25
CDC42-202ENST00000344548 TNNI3KQ59H18 835 aa16.61■□□□□ 0.25
CDC42-202ENST00000344548 FPGT-TNNI3KV9GXZ4 949 aa16.61■□□□□ 0.25
CDC42-202ENST00000344548 NHSQ6T4R5 1651 aa16.61■□□□□ 0.25
CDC42-202ENST00000344548 HSP90AB3PQ58FF7 597 aa16.61■□□□□ 0.25
CDC42-202ENST00000344548 ESYT1Q9BSJ8 1104 aa16.61■□□□□ 0.25
CDC42-202ENST00000344548 PLA2G12BQ9BX93 195 aa16.61■□□□□ 0.25
CDC42-202ENST00000344548 SBF2Q86WG5 1849 aa16.6■□□□□ 0.25
CDC42-202ENST00000344548 TTLL11Q8NHH1 800 aa16.6■□□□□ 0.25
CDC42-202ENST00000344548 GREM2Q9H772 168 aa16.6■□□□□ 0.25
CDC42-202ENST00000344548 NDUFB9Q9Y6M9 179 aa16.6■□□□□ 0.25
CDC42-202ENST00000344548 IRS4O14654 1257 aaPredicted RBP16.59■□□□□ 0.25
CDC42-202ENST00000344548 GLRX3O76003 335 aaKnown RBP16.59■□□□□ 0.25
CDC42-202ENST00000344548 CD2BP2O95400 341 aaKnown RBP16.59■□□□□ 0.25
CDC42-202ENST00000344548 ERICH6Q7L0X2 663 aa16.59■□□□□ 0.25
CDC42-202ENST00000344548 EDC3Q96F86 508 aaKnown RBP16.59■□□□□ 0.25
CDC42-202ENST00000344548 DBNDD2Q9BQY9 259 aa16.59■□□□□ 0.25
CDC42-202ENST00000344548 BOLA2Q9H3K6 86 aa16.59■□□□□ 0.25
CDC42-202ENST00000344548 ERC2O15083 957 aa16.59■□□□□ 0.25
CDC42-202ENST00000344548 TIMM10P62072 90 aa16.59■□□□□ 0.25
CDC42-202ENST00000344548 CDHR2Q9BYE9 1310 aa16.59■□□□□ 0.25
CDC42-202ENST00000344548 EYA2O00167 538 aa16.58■□□□□ 0.25
CDC42-202ENST00000344548 HCLS1P14317 486 aaPredicted RBP16.58■□□□□ 0.25
CDC42-202ENST00000344548 ZNF831Q5JPB2 1677 aa16.58■□□□□ 0.24
CDC42-202ENST00000344548 CCNL1Q9UK58 526 aaPredicted RBP16.58■□□□□ 0.24
CDC42-202ENST00000344548 CCDC57Q2TAC2 916 aa16.57■□□□□ 0.24
CDC42-202ENST00000344548 CASC1Q6TDU7 716 aa16.57■□□□□ 0.24
CDC42-202ENST00000344548 NIP7Q9Y221 180 aaKnown RBP eCLIP16.57■□□□□ 0.24
CDC42-202ENST00000344548 AK9Q5TCS8 1911 aa16.57■□□□□ 0.24
CDC42-202ENST00000344548 CTSWP56202 376 aa16.57■□□□□ 0.24
CDC42-202ENST00000344548 BCL2L12Q9HB09 334 aa16.57■□□□□ 0.24
CDC42-202ENST00000344548 LRRC4BQ9NT99 713 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms