RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CTAGE15A4D2H0 777 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 CTAGE8P0CG41 777 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 PPFIA1Q13136 1202 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 CTAGE4Q8IX94 777 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 BICD1Q96G01 975 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 GNG11P61952 73 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 CCDC57Q2TAC2 916 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 TEX2Q8IWB9 1127 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 EIF2AQ9BY44 585 aaKnown RBP7.04□□□□□ -1.28
VCAN-203ENST00000343200 ABCC8Q09428 1581 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 SLC4A8Q2Y0W8 1093 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 SMARCC2Q8TAQ2 1214 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 POLE3Q9NRF9 147 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 NOL7Q9UMY1 257 aaKnown RBP7.04□□□□□ -1.28
VCAN-203ENST00000343200 LRRD1A4D1F6 860 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 NDUFAB1O14561 156 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 ATP2A1O14983 1001 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 SOX12O15370 315 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 MAP3K21Q5TCX8 1036 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 ODF2LQ9ULJ1 636 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 DDX58O95786 925 aaKnown RBP7.03□□□□□ -1.28
VCAN-203ENST00000343200 CCDC96Q2M329 555 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 PIK3R5Q8WYR1 880 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 CAPZA3Q96KX2 299 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 UBE2HP62256 183 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 PDCD2Q16342 344 aaPredicted RBP7.03□□□□□ -1.28
VCAN-203ENST00000343200 GCC1Q96CN9 775 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 CTAGE1Q96RT6 745 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 CCDC77Q9BR77 488 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 EFCC1Q9HA90 598 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 VEZTQ9HBM0 779 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 GOLGA6CA6NDK9 693 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 GOLGA6DP0CG33 693 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 PSMD7P51665 324 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 RBM26Q5T8P6 1007 aaKnown RBP7.03□□□□□ -1.28
VCAN-203ENST00000343200 PPP1R9BQ96SB3 815 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 CENPKQ9BS16 269 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 GOLGA6AQ9NYA3 693 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 FAF1Q9UNN5 650 aaPredicted RBP7.03□□□□□ -1.28
VCAN-203ENST00000343200 SSBP05455 408 aaKnown RBP eCLIP7.03□□□□□ -1.28
VCAN-203ENST00000343200 CALCOCO2Q13137 446 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 TMC6Q7Z403 805 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 TMX1Q9H3N1 280 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 ZKSCAN5Q9Y2L8 839 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 HVCN1Q96D96 273 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 TSG101Q99816 390 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 PHAXQ9H814 394 aaKnown RBP7.03□□□□□ -1.28
VCAN-203ENST00000343200 MIA2Q96PC5 1412 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 ZSCAN23Q3MJ62 389 aa7.03□□□□□ -1.28
VCAN-203ENST00000343200 ZSCAN31Q96LW9 406 aaPredicted RBP7.02□□□□□ -1.28
VCAN-203ENST00000343200 USP25Q9UHP3 1055 aa7.02□□□□□ -1.28
VCAN-203ENST00000343200 SNCBQ16143 134 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 CFAP157Q5JU67 520 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 INF2Q27J81 1249 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 TRIM68Q6AZZ1 485 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 NAA16Q6N069 864 aaPredicted RBP7.02□□□□□ -1.29
VCAN-203ENST00000343200 ATP2A3Q93084 1043 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 FAN1Q9Y2M0 1017 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 SNRNP200O75643 2136 aaKnown RBP7.02□□□□□ -1.29
VCAN-203ENST00000343200 RMDN2Q96LZ7 410 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 KRT32Q14532 448 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 CXorf38Q8TB03 319 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 SEC62Q99442 399 aaKnown RBP7.02□□□□□ -1.29
VCAN-203ENST00000343200 RRP7AQ9Y3A4 280 aaKnown RBP7.02□□□□□ -1.29
VCAN-203ENST00000343200 ATP2A2P16615 1042 aaKnown RBP7.02□□□□□ -1.29
VCAN-203ENST00000343200 TAOK1Q7L7X3 1001 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 FSD1Q9BTV5 496 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 DHX29Q7Z478 1369 aaKnown RBP7.02□□□□□ -1.29
VCAN-203ENST00000343200 ZFXP17010 805 aaPredicted RBP7.02□□□□□ -1.29
VCAN-203ENST00000343200 ATICP31939 592 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 DIXDC1Q155Q3 683 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 KLHL40Q2TBA0 621 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 DDX19AQ9NUU7 478 aaKnown RBP7.02□□□□□ -1.29
VCAN-203ENST00000343200 ITSN2Q9NZM3 1697 aa7.02□□□□□ -1.29
VCAN-203ENST00000343200 PANK1Q8TE04 598 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 SH2B1Q9NRF2 756 aaPredicted RBP7.01□□□□□ -1.29
VCAN-203ENST00000343200 ESPL1Q14674 2120 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 MYO5BQ9ULV0 1848 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 BCAP29Q9UHQ4 241 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 SATB1Q01826 763 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 RAB11FIP4Q86YS3 637 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 SEC16AO15027 2179 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 NKTRP30414 1462 aaKnown RBP7.01□□□□□ -1.29
VCAN-203ENST00000343200 ACTN2P35609 894 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 GKAP1Q5VSY0 366 aaPredicted RBP7.01□□□□□ -1.29
VCAN-203ENST00000343200 GOLGA5Q8TBA6 731 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 WDR97A6NE52 1622 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 RPGRIP1LQ68CZ1 1315 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 PPP2R5AQ15172 486 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 CCDC14Q49A88 953 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 TBC1D31Q96DN5 1066 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 OPHN1O60890 802 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 SERPINI2O75830 405 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 SF3B2Q13435 895 aaKnown RBP7.01□□□□□ -1.29
VCAN-203ENST00000343200 TMED1Q13445 227 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 ZSCAN26Q16670 478 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.01□□□□□ -1.29
VCAN-203ENST00000343200 COMMD10Q9Y6G5 202 aa7.01□□□□□ -1.29
VCAN-203ENST00000343200 UTP14CQ5TAP6 766 aaKnown RBP7.01□□□□□ -1.29
VCAN-203ENST00000343200 SPTY2D1Q68D10 685 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms