RNA–Protein interactions for RNA: ENST00000342558.3

PPP3CB-201, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

TSL 5 BASIC

Gene PPP3CB, Length 2,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-201ENST00000342558 DRC7Q8IY82 874 aa18.42■□□□□ 0.54
PPP3CB-201ENST00000342558 ZSCAN31Q96LW9 406 aaPredicted RBP18.42■□□□□ 0.54
PPP3CB-201ENST00000342558 SH2B1Q9NRF2 756 aaPredicted RBP18.42■□□□□ 0.54
PPP3CB-201ENST00000342558 TSPYL4Q9UJ04 414 aa18.42■□□□□ 0.54
PPP3CB-201ENST00000342558 VPS37CA5D8V6 355 aaPredicted RBP18.41■□□□□ 0.54
PPP3CB-201ENST00000342558 CPA1P15085 419 aa18.41■□□□□ 0.54
PPP3CB-201ENST00000342558 LIG1P18858 919 aa18.41■□□□□ 0.54
PPP3CB-201ENST00000342558 VPS53Q5VIR6 699 aa18.41■□□□□ 0.54
PPP3CB-201ENST00000342558 STK31Q9BXU1 1019 aa18.41■□□□□ 0.54
PPP3CB-201ENST00000342558 TMEM51Q9NW97 253 aa18.41■□□□□ 0.54
PPP3CB-201ENST00000342558 LMTK3Q96Q04 1460 aa18.41■□□□□ 0.54
PPP3CB-201ENST00000342558 NFAT5O94916 1531 aa18.41■□□□□ 0.54
PPP3CB-201ENST00000342558 KRT85P78386 507 aa18.41■□□□□ 0.54
PPP3CB-201ENST00000342558 FLIIQ13045 1269 aa18.41■□□□□ 0.54
PPP3CB-201ENST00000342558 CAMK4Q16566 473 aa18.41■□□□□ 0.54
PPP3CB-201ENST00000342558 ANO6Q4KMQ2 910 aa18.41■□□□□ 0.54
PPP3CB-201ENST00000342558 MST1RQ04912 1400 aa18.4■□□□□ 0.54
PPP3CB-201ENST00000342558 TDRD7Q8NHU6 1098 aaKnown RBP18.4■□□□□ 0.54
PPP3CB-201ENST00000342558 SSH3Q8TE77 659 aa18.4■□□□□ 0.54
PPP3CB-201ENST00000342558 TRIM5Q9C035 493 aa18.4■□□□□ 0.54
PPP3CB-201ENST00000342558 CCDC171Q6TFL3 1326 aa18.4■□□□□ 0.54
PPP3CB-201ENST00000342558 RAB11FIP3O75154 756 aa18.4■□□□□ 0.54
PPP3CB-201ENST00000342558 ST3GAL1Q11201 340 aa18.4■□□□□ 0.54
PPP3CB-201ENST00000342558 TERF2Q15554 542 aa18.4■□□□□ 0.54
PPP3CB-201ENST00000342558 CNTROBQ8N137 903 aa18.4■□□□□ 0.54
PPP3CB-201ENST00000342558 TPD52L1Q16890 204 aaPredicted RBP18.39■□□□□ 0.53
PPP3CB-201ENST00000342558 RBM43Q6ZSC3 357 aaKnown RBP18.39■□□□□ 0.53
PPP3CB-201ENST00000342558 ARHGEF25Q86VW2 580 aa18.39■□□□□ 0.53
PPP3CB-201ENST00000342558 TNMDQ9H2S6 317 aa18.39■□□□□ 0.53
PPP3CB-201ENST00000342558 PDRG1Q9NUG6 133 aa18.39■□□□□ 0.53
PPP3CB-201ENST00000342558 RGPD2P0DJD1 1756 aa18.39■□□□□ 0.53
PPP3CB-201ENST00000342558 CADPS2Q86UW7 1296 aa18.39■□□□□ 0.53
PPP3CB-201ENST00000342558 KRT222Q8N1A0 295 aa18.39■□□□□ 0.53
PPP3CB-201ENST00000342558 CACTINQ8WUQ7 758 aaKnown RBP18.39■□□□□ 0.53
PPP3CB-201ENST00000342558 DTNBO60941 627 aa18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 PDIA4P13667 645 aaKnown RBP18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 CKAP2LQ8IYA6 745 aa18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 TM6SF1Q9BZW5 370 aa18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 SPG7Q9UQ90 795 aa18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 CHMP3Q9Y3E7 222 aa18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 USP54Q70EL1 1684 aa18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 STRCQ7RTU9 1775 aa18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 CEP135Q66GS9 1140 aa18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 CWC27Q6UX04 472 aaKnown RBP18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 ZNF397Q8NF99 534 aaPredicted RBP18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 USP44Q9H0E7 712 aa18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 ZSWIM6Q9HCJ5 1215 aa18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 DACT1Q9NYF0 836 aa18.38■□□□□ 0.53
PPP3CB-201ENST00000342558 N4BP2Q86UW6 1770 aaPredicted RBP18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 GNAT3A8MTJ3 354 aa18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 DDX19AQ9NUU7 478 aaKnown RBP18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 FAM53CQ9NYF3 392 aa18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 CRYBG1Q9Y4K1 1723 aa18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 FAM208AQ9UK61 1670 aaKnown RBP18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 CDC25BP30305 580 aa18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 ME3Q16798 604 aa18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 ADCK5Q3MIX3 580 aa18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 IL17REQ8NFR9 667 aa18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 RHPN1Q8TCX5 695 aa18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 JAKMIP1Q96N16 626 aaKnown RBP18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 CLIP2Q9UDT6 1046 aa18.37■□□□□ 0.53
PPP3CB-201ENST00000342558 UBTFL1P0CB47 393 aaPredicted RBP18.36■□□□□ 0.53
PPP3CB-201ENST00000342558 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
PPP3CB-201ENST00000342558 ANKRD24Q8TF21 1146 aa18.36■□□□□ 0.53
PPP3CB-201ENST00000342558 KCNB2Q92953 911 aa18.36■□□□□ 0.53
PPP3CB-201ENST00000342558 CYP46A1Q9Y6A2 500 aa18.36■□□□□ 0.53
PPP3CB-201ENST00000342558 PXDNLA1KZ92 1463 aa18.36■□□□□ 0.53
PPP3CB-201ENST00000342558 POLA2Q14181 598 aa18.35■□□□□ 0.53
PPP3CB-201ENST00000342558 CCDC144BQ3MJ40 725 aa18.35■□□□□ 0.53
PPP3CB-201ENST00000342558 KMT5BQ4FZB7 885 aa18.35■□□□□ 0.53
PPP3CB-201ENST00000342558 CCDC30Q5VVM6 783 aa18.35■□□□□ 0.53
PPP3CB-201ENST00000342558 CCDC144CPQ8IYA2 1237 aa18.35■□□□□ 0.53
PPP3CB-201ENST00000342558 CLSTN2Q9H4D0 955 aa18.35■□□□□ 0.53
PPP3CB-201ENST00000342558 TRPM3Q9HCF6 1732 aaPredicted RBP18.35■□□□□ 0.53
PPP3CB-201ENST00000342558 CCDC66A2RUB6 948 aa18.35■□□□□ 0.53
PPP3CB-201ENST00000342558 SURF6O75683 361 aaKnown RBP18.35■□□□□ 0.53
PPP3CB-201ENST00000342558 CDC37L1Q7L3B6 337 aa18.35■□□□□ 0.53
PPP3CB-201ENST00000342558 NPHP3Q7Z494 1330 aa18.35■□□□□ 0.53
PPP3CB-201ENST00000342558 ZNF165P49910 485 aa18.34■□□□□ 0.53
PPP3CB-201ENST00000342558 NECTIN2Q92692 538 aa18.34■□□□□ 0.53
PPP3CB-201ENST00000342558 SCAND2PQ9GZW5 306 aaPredicted RBP18.34■□□□□ 0.53
PPP3CB-201ENST00000342558 CHRNA2Q15822 529 aa18.34■□□□□ 0.53
PPP3CB-201ENST00000342558 KIF1BPQ96EK5 621 aa18.34■□□□□ 0.53
PPP3CB-201ENST00000342558 RBM6P78332 1123 aaKnown RBP18.33■□□□□ 0.53
PPP3CB-201ENST00000342558 PTH1RQ03431 593 aa18.33■□□□□ 0.53
PPP3CB-201ENST00000342558 FAM173BQ6P4H8 233 aa18.33■□□□□ 0.53
PPP3CB-201ENST00000342558 FERMT3Q86UX7 667 aa18.33■□□□□ 0.53
PPP3CB-201ENST00000342558 NECAB1Q8N987 351 aa18.33■□□□□ 0.53
PPP3CB-201ENST00000342558 ZNF592Q92610 1267 aa18.33■□□□□ 0.53
PPP3CB-201ENST00000342558 LGR6Q9HBX8 967 aa18.33■□□□□ 0.53
PPP3CB-201ENST00000342558 ZNF215Q9UL58 517 aaPredicted RBP18.33■□□□□ 0.53
PPP3CB-201ENST00000342558 MAP3K5Q99683 1374 aa18.33■□□□□ 0.53
PPP3CB-201ENST00000342558 PDCP20941 246 aa18.33■□□□□ 0.52
PPP3CB-201ENST00000342558 PRPF40BQ6NWY9 871 aaKnown RBP18.33■□□□□ 0.52
PPP3CB-201ENST00000342558 NYAP1Q6ZVC0 841 aa18.33■□□□□ 0.52
PPP3CB-201ENST00000342558 PPP1R42Q7Z4L9 355 aa18.33■□□□□ 0.52
PPP3CB-201ENST00000342558 LRRC8AQ8IWT6 810 aa18.33■□□□□ 0.52
PPP3CB-201ENST00000342558 RUFY2Q8WXA3 655 aa18.33■□□□□ 0.52
PPP3CB-201ENST00000342558 USP42Q9H9J4 1324 aaKnown RBP18.32■□□□□ 0.52
PPP3CB-201ENST00000342558 GOLGA6L4A6NEF3 574 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms