RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 ZNF804AQ7Z570 1209 aa16.61■□□□□ 0.25
PDPK1-202ENST00000342085 GINS2Q9Y248 185 aa16.61■□□□□ 0.25
PDPK1-202ENST00000342085 PAFAH1B1P43034 410 aa16.61■□□□□ 0.25
PDPK1-202ENST00000342085 MSH6P52701 1360 aa16.61■□□□□ 0.25
PDPK1-202ENST00000342085 ANKRD50Q9ULJ7 1429 aa16.61■□□□□ 0.25
PDPK1-202ENST00000342085 CNNM3Q8NE01 707 aa16.61■□□□□ 0.25
PDPK1-202ENST00000342085 PRG4Q92954 1404 aaPredicted RBP16.61■□□□□ 0.25
PDPK1-202ENST00000342085 UBA7P41226 1012 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 RNF34Q969K3 372 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 TMOD4Q9NZQ9 345 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 NOC2LQ9Y3T9 749 aaKnown RBP16.6■□□□□ 0.25
PDPK1-202ENST00000342085 CCDC66A2RUB6 948 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 AMOTL2Q9Y2J4 779 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 RIOK3O14730 519 aaKnown RBP16.6■□□□□ 0.25
PDPK1-202ENST00000342085 TRAF1Q13077 416 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 TMCO3Q6UWJ1 677 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 RAB11FIP4Q86YS3 637 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 CCDC63Q8NA47 563 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 GIMAP7Q8NHV1 300 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 JARID2Q92833 1246 aaPredicted RBP16.6■□□□□ 0.25
PDPK1-202ENST00000342085 GOLIM4O00461 696 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 KIF5CO60282 957 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 TCIRG1Q13488 830 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 HEATR3Q7Z4Q2 680 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 ZGPATQ8N5A5 531 aaKnown RBP16.6■□□□□ 0.25
PDPK1-202ENST00000342085 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
PDPK1-202ENST00000342085 NAIPQ13075 1403 aa16.59■□□□□ 0.25
PDPK1-202ENST00000342085 MVPQ14764 893 aaKnown RBP16.59■□□□□ 0.25
PDPK1-202ENST00000342085 RTCBQ9Y3I0 505 aaKnown RBP16.59■□□□□ 0.25
PDPK1-202ENST00000342085 DDB1Q16531 1140 aa16.59■□□□□ 0.25
PDPK1-202ENST00000342085 CASQ1P31415 396 aa16.59■□□□□ 0.25
PDPK1-202ENST00000342085 HAND2P61296 217 aa16.59■□□□□ 0.25
PDPK1-202ENST00000342085 PANK2Q9BZ23 570 aa16.59■□□□□ 0.25
PDPK1-202ENST00000342085 EEF2P13639 858 aaKnown RBP16.59■□□□□ 0.25
PDPK1-202ENST00000342085 HYPKQ9NX55 129 aa16.59■□□□□ 0.25
PDPK1-202ENST00000342085 KCNA4P22459 653 aa16.58■□□□□ 0.25
PDPK1-202ENST00000342085 ERBINQ96RT1 1412 aa16.58■□□□□ 0.25
PDPK1-202ENST00000342085 MRE11P49959 708 aa16.58■□□□□ 0.24
PDPK1-202ENST00000342085 SYNJ2O15056 1496 aa16.58■□□□□ 0.24
PDPK1-202ENST00000342085 A0A1W2PRG0 241 aa16.58■□□□□ 0.24
PDPK1-202ENST00000342085 GLRX3O76003 335 aaKnown RBP16.58■□□□□ 0.24
PDPK1-202ENST00000342085 GABPAQ06546 454 aa16.58■□□□□ 0.24
PDPK1-202ENST00000342085 KIF4BQ2VIQ3 1234 aa16.58■□□□□ 0.24
PDPK1-202ENST00000342085 YEATS4O95619 227 aa16.58■□□□□ 0.24
PDPK1-202ENST00000342085 EIF6P56537 245 aaKnown RBP16.58■□□□□ 0.24
PDPK1-202ENST00000342085 IFNL2Q8IZJ0 200 aa16.58■□□□□ 0.24
PDPK1-202ENST00000342085 IQCGQ9H095 443 aaKnown RBP16.58■□□□□ 0.24
PDPK1-202ENST00000342085 RPGRIP1LQ68CZ1 1315 aa16.58■□□□□ 0.24
PDPK1-202ENST00000342085 C6orf50Q9HD87 102 aa16.58■□□□□ 0.24
PDPK1-202ENST00000342085 NIP7Q9Y221 180 aaKnown RBP eCLIP16.58■□□□□ 0.24
PDPK1-202ENST00000342085 RNF187Q5TA31 235 aaPredicted RBP16.57■□□□□ 0.24
PDPK1-202ENST00000342085 CADPS2Q86UW7 1296 aa16.57■□□□□ 0.24
PDPK1-202ENST00000342085 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
PDPK1-202ENST00000342085 MICU3Q86XE3 530 aa16.57■□□□□ 0.24
PDPK1-202ENST00000342085 EXOC1Q9NV70 894 aa16.57■□□□□ 0.24
PDPK1-202ENST00000342085 TMEM110-MUSTN1A8MSY1 372 aa16.57■□□□□ 0.24
PDPK1-202ENST00000342085 CYP7A1P22680 504 aa16.57■□□□□ 0.24
PDPK1-202ENST00000342085 KIF22Q14807 665 aa16.57■□□□□ 0.24
PDPK1-202ENST00000342085 GTF3C6Q969F1 213 aa16.57■□□□□ 0.24
PDPK1-202ENST00000342085 FAM13AO94988 1023 aa16.57■□□□□ 0.24
PDPK1-202ENST00000342085 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
PDPK1-202ENST00000342085 SMARCA5O60264 1052 aaPredicted RBP16.57■□□□□ 0.24
PDPK1-202ENST00000342085 RAB11FIP3O75154 756 aa16.57■□□□□ 0.24
PDPK1-202ENST00000342085 NSFL1CQ9UNZ2 370 aaKnown RBP16.57■□□□□ 0.24
PDPK1-202ENST00000342085 PPP4R3BQ5MIZ7 849 aa16.56■□□□□ 0.24
PDPK1-202ENST00000342085 PAIP2Q9BPZ3 127 aaKnown RBP16.56■□□□□ 0.24
PDPK1-202ENST00000342085 SLC26A6Q9BXS9 759 aa16.56■□□□□ 0.24
PDPK1-202ENST00000342085 TOP1P11387 765 aaKnown RBP16.56■□□□□ 0.24
PDPK1-202ENST00000342085 HARSP12081 509 aaKnown RBP16.56■□□□□ 0.24
PDPK1-202ENST00000342085 ATXN8OSP0DMR3 200 aa16.56■□□□□ 0.24
PDPK1-202ENST00000342085 LRRC27Q9C0I9 530 aa16.56■□□□□ 0.24
PDPK1-202ENST00000342085 PFDN4Q9NQP4 134 aa16.56■□□□□ 0.24
PDPK1-202ENST00000342085 PKD2L1Q9P0L9 805 aa16.56■□□□□ 0.24
PDPK1-202ENST00000342085 K7ELQ4 463 aaPredicted RBP16.56■□□□□ 0.24
PDPK1-202ENST00000342085 TRIM6Q9C030 488 aaPredicted RBP16.56■□□□□ 0.24
PDPK1-202ENST00000342085 GSTA5Q7RTV2 222 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 CDCA7LQ96GN5 454 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 MAP3K2Q9Y2U5 619 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 CCDC172P0C7W6 258 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 MXRA7P84157 204 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 THUMPD2Q9BTF0 503 aaKnown RBP16.55■□□□□ 0.24
PDPK1-202ENST00000342085 GAS8O95995 478 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 MAP3K11Q16584 847 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 SMC1BQ8NDV3 1235 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 NYXQ9GZU5 481 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 CEP83Q9Y592 693 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 FAM114A1Q8IWE2 563 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 CFAP57Q96MR6 1250 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 ANKRD30BQ9BXX2 1392 aa16.55■□□□□ 0.24
PDPK1-202ENST00000342085 SMARCC1Q92922 1105 aaPredicted RBP16.55■□□□□ 0.24
PDPK1-202ENST00000342085 RASA3Q14644 834 aa16.54■□□□□ 0.24
PDPK1-202ENST00000342085 IFIT1BQ5T764 474 aaKnown RBP16.54■□□□□ 0.24
PDPK1-202ENST00000342085 EYA3Q99504 573 aa16.54■□□□□ 0.24
PDPK1-202ENST00000342085 SHTN1A0MZ66 631 aa16.54■□□□□ 0.24
PDPK1-202ENST00000342085 MAP7D1Q3KQU3 841 aa16.54■□□□□ 0.24
PDPK1-202ENST00000342085 TSHZ2Q9NRE2 1034 aa16.54■□□□□ 0.24
PDPK1-202ENST00000342085 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
PDPK1-202ENST00000342085 HMGB1P09429 215 aaKnown RBP16.54■□□□□ 0.24
PDPK1-202ENST00000342085 TICAM2Q86XR7 235 aa16.54■□□□□ 0.24
PDPK1-202ENST00000342085 CSPG5O95196 566 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms