RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 MRPL50Q8N5N7 158 aaKnown RBP16.41■□□□□ 0.22
SRSF3-201ENST00000339436 MYD88Q99836 296 aa16.41■□□□□ 0.22
SRSF3-201ENST00000339436 BRIP1Q9BX63 1249 aa16.41■□□□□ 0.22
SRSF3-201ENST00000339436 BCL2L13Q9BXK5 485 aa16.41■□□□□ 0.22
SRSF3-201ENST00000339436 TRIM28Q13263 835 aaKnown RBP16.4■□□□□ 0.22
SRSF3-201ENST00000339436 PPP1R42Q7Z4L9 355 aa16.4■□□□□ 0.22
SRSF3-201ENST00000339436 NUTM1Q86Y26 1132 aa16.4■□□□□ 0.22
SRSF3-201ENST00000339436 SMC4Q9NTJ3 1288 aa16.4■□□□□ 0.22
SRSF3-201ENST00000339436 CHD4Q14839 1912 aa16.4■□□□□ 0.22
SRSF3-201ENST00000339436 DPEP1P16444 411 aa16.4■□□□□ 0.22
SRSF3-201ENST00000339436 UTP14AQ9BVJ6 771 aaKnown RBP16.4■□□□□ 0.22
SRSF3-201ENST00000339436 PTPRCP08575 1304 aa16.39■□□□□ 0.21
SRSF3-201ENST00000339436 A0A0G2JLW4 131 aa16.39■□□□□ 0.21
SRSF3-201ENST00000339436 GTF2E1P29083 439 aaPredicted RBP16.39■□□□□ 0.21
SRSF3-201ENST00000339436 CHRNA5P30532 468 aa16.39■□□□□ 0.21
SRSF3-201ENST00000339436 RARSP54136 660 aaKnown RBP16.39■□□□□ 0.21
SRSF3-201ENST00000339436 ERFEQ4G0M1 354 aa16.39■□□□□ 0.21
SRSF3-201ENST00000339436 DNAAF4Q8WXU2 420 aa16.39■□□□□ 0.21
SRSF3-201ENST00000339436 SLX4Q8IY92 1834 aa16.38■□□□□ 0.21
SRSF3-201ENST00000339436 SH3TC1Q8TE82 1336 aa16.38■□□□□ 0.21
SRSF3-201ENST00000339436 IGKV5-2P06315 115 aa16.38■□□□□ 0.21
SRSF3-201ENST00000339436 KCNA3P22001 575 aa16.38■□□□□ 0.21
SRSF3-201ENST00000339436 PDE6BP35913 854 aa16.38■□□□□ 0.21
SRSF3-201ENST00000339436 NEXNQ0ZGT2 675 aa16.38■□□□□ 0.21
SRSF3-201ENST00000339436 TAF1P21675 1872 aa16.37■□□□□ 0.21
SRSF3-201ENST00000339436 F6X3S4 739 aa16.37■□□□□ 0.21
SRSF3-201ENST00000339436 BRPF1P55201 1214 aaPredicted RBP16.37■□□□□ 0.21
SRSF3-201ENST00000339436 CCDC191Q8NCU4 936 aa16.37■□□□□ 0.21
SRSF3-201ENST00000339436 CWC25Q9NXE8 425 aaPredicted RBP16.37■□□□□ 0.21
SRSF3-201ENST00000339436 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
SRSF3-201ENST00000339436 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
SRSF3-201ENST00000339436 KLRG2A4D1S0 409 aaPredicted RBP16.36■□□□□ 0.21
SRSF3-201ENST00000339436 NEURL1BA8MQ27 555 aa16.36■□□□□ 0.21
SRSF3-201ENST00000339436 C2CD5Q86YS7 1000 aa16.36■□□□□ 0.21
SRSF3-201ENST00000339436 KIF16BQ96L93 1317 aa16.36■□□□□ 0.21
SRSF3-201ENST00000339436 H0YIN7 160 aa16.35■□□□□ 0.21
SRSF3-201ENST00000339436 CWF19L2Q2TBE0 894 aaKnown RBP16.35■□□□□ 0.21
SRSF3-201ENST00000339436 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
SRSF3-201ENST00000339436 WWC3Q9ULE0 1092 aa16.35■□□□□ 0.21
SRSF3-201ENST00000339436 SRGNP10124 158 aa16.35■□□□□ 0.21
SRSF3-201ENST00000339436 CRY2Q49AN0 593 aa16.35■□□□□ 0.21
SRSF3-201ENST00000339436 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
SRSF3-201ENST00000339436 LINS1Q8NG48 757 aa16.35■□□□□ 0.21
SRSF3-201ENST00000339436 YBX3P16989 372 aaKnown RBP eCLIP16.34■□□□□ 0.21
SRSF3-201ENST00000339436 SLC10A5Q5PT55 438 aa16.34■□□□□ 0.21
SRSF3-201ENST00000339436 ZBTB38Q8NAP3 1195 aaPredicted RBP16.34■□□□□ 0.21
SRSF3-201ENST00000339436 FAM89AQ96GI7 184 aa16.34■□□□□ 0.21
SRSF3-201ENST00000339436 PIM2Q9P1W9 311 aa16.34■□□□□ 0.21
SRSF3-201ENST00000339436 FER1L6Q2WGJ9 1857 aa16.33■□□□□ 0.21
SRSF3-201ENST00000339436 PCCAP05165 728 aaPredicted RBP16.33■□□□□ 0.2
SRSF3-201ENST00000339436 BEND3Q5T5X7 828 aa16.33■□□□□ 0.2
SRSF3-201ENST00000339436 C3orf67Q6ZVT6 689 aa16.33■□□□□ 0.2
SRSF3-201ENST00000339436 PELP1Q8IZL8 1130 aaKnown RBP16.33■□□□□ 0.2
SRSF3-201ENST00000339436 SPEF2Q9C093 1822 aa16.33■□□□□ 0.2
SRSF3-201ENST00000339436 HCLS1P14317 486 aaPredicted RBP16.32■□□□□ 0.2
SRSF3-201ENST00000339436 GCKRQ14397 625 aa16.32■□□□□ 0.2
SRSF3-201ENST00000339436 GPR162Q16538 588 aa16.32■□□□□ 0.2
SRSF3-201ENST00000339436 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
SRSF3-201ENST00000339436 STYK1Q6J9G0 422 aa16.32■□□□□ 0.2
SRSF3-201ENST00000339436 MASTLQ96GX5 879 aa16.32■□□□□ 0.2
SRSF3-201ENST00000339436 NOB1Q9ULX3 412 aaKnown RBP16.32■□□□□ 0.2
SRSF3-201ENST00000339436 SBF1O95248 1867 aa16.32■□□□□ 0.2
SRSF3-201ENST00000339436 CCDC88AQ3V6T2 1871 aa16.32■□□□□ 0.2
SRSF3-201ENST00000339436 BCAR3O75815 825 aa16.31■□□□□ 0.2
SRSF3-201ENST00000339436 NPR1P16066 1061 aa16.31■□□□□ 0.2
SRSF3-201ENST00000339436 DALRD3Q5D0E6 543 aaKnown RBP16.31■□□□□ 0.2
SRSF3-201ENST00000339436 SLC4A10Q6U841 1118 aa16.31■□□□□ 0.2
SRSF3-201ENST00000339436 BCS1LQ9Y276 419 aa16.31■□□□□ 0.2
SRSF3-201ENST00000339436 LRRC37AA6NMS7 1700 aa16.31■□□□□ 0.2
SRSF3-201ENST00000339436 CDHR2Q9BYE9 1310 aa16.31■□□□□ 0.2
SRSF3-201ENST00000339436 DCAF8L1A6NGE4 600 aa16.3■□□□□ 0.2
SRSF3-201ENST00000339436 IRS4O14654 1257 aaPredicted RBP16.3■□□□□ 0.2
SRSF3-201ENST00000339436 TTLL6Q8N841 843 aa16.3■□□□□ 0.2
SRSF3-201ENST00000339436 ZNF622Q969S3 477 aaKnown RBP eCLIP16.3■□□□□ 0.26e-20■□□□□ 9.5
SRSF3-201ENST00000339436 NLRP3Q96P20 1036 aa16.3■□□□□ 0.2
SRSF3-201ENST00000339436 ALDH1L1O75891 902 aa16.29■□□□□ 0.2
SRSF3-201ENST00000339436 UBE3BQ7Z3V4 1068 aa16.29■□□□□ 0.2
SRSF3-201ENST00000339436 RPGRQ92834 1020 aaKnown RBP16.29■□□□□ 0.2
SRSF3-201ENST00000339436 API5Q9BZZ5 524 aaKnown RBP16.29■□□□□ 0.2
SRSF3-201ENST00000339436 SRCIN1Q9C0H9 1055 aa16.29■□□□□ 0.2
SRSF3-201ENST00000339436 COL4A1P02462 1669 aa16.29■□□□□ 0.2
SRSF3-201ENST00000339436 HSP90B1P14625 803 aaKnown RBP16.29■□□□□ 0.2
SRSF3-201ENST00000339436 HOXA10P31260 410 aaPredicted RBP16.29■□□□□ 0.2
SRSF3-201ENST00000339436 PRPF40BQ6NWY9 871 aaKnown RBP16.29■□□□□ 0.2
SRSF3-201ENST00000339436 ARHGAP45Q92619 1136 aa16.29■□□□□ 0.2
SRSF3-201ENST00000339436 JARID2Q92833 1246 aaPredicted RBP16.29■□□□□ 0.2
SRSF3-201ENST00000339436 CNKSR1Q969H4 720 aa16.29■□□□□ 0.2
SRSF3-201ENST00000339436 H7C1W4 665 aa16.28■□□□□ 0.2
SRSF3-201ENST00000339436 CASP7P55210 303 aa16.28■□□□□ 0.2
SRSF3-201ENST00000339436 ABCC4O15439 1325 aa16.28■□□□□ 0.2
SRSF3-201ENST00000339436 DICER1Q9UPY3 1922 aaKnown RBP16.27■□□□□ 0.2
SRSF3-201ENST00000339436 GRM8O00222 908 aa16.27■□□□□ 0.2
SRSF3-201ENST00000339436 GRIN3BO60391 1043 aa16.27■□□□□ 0.2
SRSF3-201ENST00000339436 TRIM27P14373 513 aa16.27■□□□□ 0.2
SRSF3-201ENST00000339436 IPO8O15397 1037 aaKnown RBP16.26■□□□□ 0.19
SRSF3-201ENST00000339436 PDE8AO60658 829 aa16.26■□□□□ 0.19
SRSF3-201ENST00000339436 SF3B3Q15393 1217 aaKnown RBP16.26■□□□□ 0.19
SRSF3-201ENST00000339436 ATF7IPQ6VMQ6 1270 aa16.26■□□□□ 0.19
SRSF3-201ENST00000339436 FRAT1Q92837 279 aaPredicted RBP16.26■□□□□ 0.19
SRSF3-201ENST00000339436 ALDH1B1P30837 517 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms