RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 LIG1P18858 919 aa14.06□□□□□ -0.16
RBM39-202ENST00000338163 TPD52L1Q16890 204 aaPredicted RBP14.06□□□□□ -0.16
RBM39-202ENST00000338163 ANO6Q4KMQ2 910 aa14.06□□□□□ -0.16
RBM39-202ENST00000338163 CCDC112Q8NEF3 446 aa14.06□□□□□ -0.16
RBM39-202ENST00000338163 TNMDQ9H2S6 317 aa14.06□□□□□ -0.16
RBM39-202ENST00000338163 PDRG1Q9NUG6 133 aa14.06□□□□□ -0.16
RBM39-202ENST00000338163 KCNJ4P48050 445 aa14.05□□□□□ -0.16
RBM39-202ENST00000338163 PRPF40BQ6NWY9 871 aaKnown RBP14.05□□□□□ -0.16
RBM39-202ENST00000338163 SOS1Q07889 1333 aaPredicted RBP14.05□□□□□ -0.16
RBM39-202ENST00000338163 OS9Q13438 667 aaPredicted RBP14.05□□□□□ -0.16
RBM39-202ENST00000338163 ADCK5Q3MIX3 580 aa14.05□□□□□ -0.16
RBM39-202ENST00000338163 ARHGEF25Q86VW2 580 aa14.05□□□□□ -0.16
RBM39-202ENST00000338163 CNTROBQ8N137 903 aa14.05□□□□□ -0.16
RBM39-202ENST00000338163 FEZ1Q99689 392 aa14.05□□□□□ -0.16
RBM39-202ENST00000338163 DACT1Q9NYF0 836 aa14.05□□□□□ -0.16
RBM39-202ENST00000338163 OGFRQ9NZT2 677 aa14.05□□□□□ -0.16
RBM39-202ENST00000338163 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.05□□□□□ -0.168e-48■□□□□ 10.7
RBM39-202ENST00000338163 V9GYY5 206 aaPredicted RBP14.05□□□□□ -0.16
RBM39-202ENST00000338163 NUTM2BA6NNL0 878 aaPredicted RBP14.05□□□□□ -0.16
RBM39-202ENST00000338163 NUTM2EB1AL46 878 aaPredicted RBP14.05□□□□□ -0.16
RBM39-202ENST00000338163 HOXC9P31274 260 aa14.05□□□□□ -0.16
RBM39-202ENST00000338163 LARP1BQ659C4 914 aaKnown RBP14.05□□□□□ -0.16
RBM39-202ENST00000338163 TTC6Q86TZ1 520 aa14.05□□□□□ -0.16
RBM39-202ENST00000338163 NUTM2AQ8IVF1 878 aaPredicted RBP14.05□□□□□ -0.16
RBM39-202ENST00000338163 LSG1Q9H089 658 aaKnown RBP14.05□□□□□ -0.16
RBM39-202ENST00000338163 HYPKQ9NX55 129 aa14.05□□□□□ -0.16
RBM39-202ENST00000338163 TFIP11Q9UBB9 837 aaKnown RBP14.05□□□□□ -0.16
RBM39-202ENST00000338163 MRVI1Q9Y6F6 885 aa14.05□□□□□ -0.16
RBM39-202ENST00000338163 NHSL1Q5SYE7 1610 aa14.04□□□□□ -0.16
RBM39-202ENST00000338163 HSPA1LP34931 641 aa14.04□□□□□ -0.16
RBM39-202ENST00000338163 KRT85P78386 507 aa14.04□□□□□ -0.16
RBM39-202ENST00000338163 MTHFSDQ2M296 383 aaKnown RBP14.04□□□□□ -0.16
RBM39-202ENST00000338163 ALS2Q96Q42 1657 aa14.04□□□□□ -0.16
RBM39-202ENST00000338163 SRGAP3O43295 1099 aa14.04□□□□□ -0.16
RBM39-202ENST00000338163 PPP1R42Q7Z4L9 355 aa14.04□□□□□ -0.16
RBM39-202ENST00000338163 CBX8Q9HC52 389 aa14.04□□□□□ -0.16
RBM39-202ENST00000338163 PRDM11Q9NQV5 511 aa14.04□□□□□ -0.16
RBM39-202ENST00000338163 FLT4P35916 1363 aa14.03□□□□□ -0.16
RBM39-202ENST00000338163 MED1Q15648 1581 aaPredicted RBP14.03□□□□□ -0.16
RBM39-202ENST00000338163 SMTNL1A8MU46 457 aa14.03□□□□□ -0.16
RBM39-202ENST00000338163 CDC37L1Q7L3B6 337 aa14.03□□□□□ -0.16
RBM39-202ENST00000338163 BBXQ8WY36 941 aaPredicted RBP14.03□□□□□ -0.16
RBM39-202ENST00000338163 TCEANC2Q96MN5 208 aa14.03□□□□□ -0.16
RBM39-202ENST00000338163 CCDC30Q5VVM6 783 aa14.03□□□□□ -0.16
RBM39-202ENST00000338163 ZSCAN25Q6NSZ9 544 aa14.03□□□□□ -0.16
RBM39-202ENST00000338163 RHPN1Q8TCX5 695 aa14.03□□□□□ -0.16
RBM39-202ENST00000338163 USP44Q9H0E7 712 aa14.03□□□□□ -0.16
RBM39-202ENST00000338163 AXIN2Q9Y2T1 843 aa14.03□□□□□ -0.16
RBM39-202ENST00000338163 CYP46A1Q9Y6A2 500 aa14.03□□□□□ -0.16
RBM39-202ENST00000338163 AHDC1Q5TGY3 1603 aaPredicted RBP14.03□□□□□ -0.16
RBM39-202ENST00000338163 ADAMTS2O95450 1211 aa14.02□□□□□ -0.16
RBM39-202ENST00000338163 PTH1RQ03431 593 aa14.02□□□□□ -0.16
RBM39-202ENST00000338163 PI4K2BQ8TCG2 481 aa14.02□□□□□ -0.16
RBM39-202ENST00000338163 IP6K1Q92551 441 aa14.02□□□□□ -0.16
RBM39-202ENST00000338163 CLIP2Q9UDT6 1046 aa14.02□□□□□ -0.16
RBM39-202ENST00000338163 CTNNA3Q9UI47 895 aa14.02□□□□□ -0.16
RBM39-202ENST00000338163 ME3Q16798 604 aa14.02□□□□□ -0.17
RBM39-202ENST00000338163 BICD2Q8TD16 824 aa14.02□□□□□ -0.17
RBM39-202ENST00000338163 DNAJC25Q9H1X3 360 aa14.02□□□□□ -0.17
RBM39-202ENST00000338163 CRB1P82279 1406 aa14.01□□□□□ -0.17
RBM39-202ENST00000338163 NPHP1O15259 732 aa14.01□□□□□ -0.17
RBM39-202ENST00000338163 NFAT5O94916 1531 aa14.01□□□□□ -0.17
RBM39-202ENST00000338163 ZNF165P49910 485 aa14.01□□□□□ -0.17
RBM39-202ENST00000338163 SPATA32Q96LK8 384 aa14.01□□□□□ -0.17
RBM39-202ENST00000338163 PHLPP1O60346 1717 aa14.01□□□□□ -0.17
RBM39-202ENST00000338163 MARF1Q9Y4F3 1742 aaKnown RBP14.01□□□□□ -0.17
RBM39-202ENST00000338163 ZBTB22O15209 634 aa14□□□□□ -0.17
RBM39-202ENST00000338163 IL17RAQ96F46 866 aa14□□□□□ -0.17
RBM39-202ENST00000338163 SLIT3O75094 1523 aa14□□□□□ -0.17
RBM39-202ENST00000338163 ZKSCAN1P17029 563 aaPredicted RBP14□□□□□ -0.17
RBM39-202ENST00000338163 ZNF75DP51815 510 aa14□□□□□ -0.17
RBM39-202ENST00000338163 STK3Q13188 491 aa14□□□□□ -0.17
RBM39-202ENST00000338163 CEP135Q66GS9 1140 aa14□□□□□ -0.17
RBM39-202ENST00000338163 CACTINQ8WUQ7 758 aaKnown RBP14□□□□□ -0.17
RBM39-202ENST00000338163 AOX1Q06278 1338 aa14□□□□□ -0.17
RBM39-202ENST00000338163 RAB11FIP3O75154 756 aa14□□□□□ -0.17
RBM39-202ENST00000338163 KIF1BPQ96EK5 621 aa14□□□□□ -0.17
RBM39-202ENST00000338163 SH2B1Q9NRF2 756 aaPredicted RBP14□□□□□ -0.17
RBM39-202ENST00000338163 ERICH4A6NGS2 130 aa13.99□□□□□ -0.17
RBM39-202ENST00000338163 VPS53Q5VIR6 699 aa13.99□□□□□ -0.17
RBM39-202ENST00000338163 PHAXQ9H814 394 aaKnown RBP13.99□□□□□ -0.17
RBM39-202ENST00000338163 TRMT1Q9NXH9 659 aaKnown RBP13.99□□□□□ -0.17
RBM39-202ENST00000338163 EIF2S2P20042 333 aaKnown RBP13.99□□□□□ -0.17
RBM39-202ENST00000338163 FGD1P98174 961 aa13.99□□□□□ -0.17
RBM39-202ENST00000338163 ST3GAL1Q11201 340 aa13.99□□□□□ -0.17
RBM39-202ENST00000338163 ARID5BQ14865 1188 aa13.99□□□□□ -0.17
RBM39-202ENST00000338163 CCDC144BQ3MJ40 725 aa13.99□□□□□ -0.17
RBM39-202ENST00000338163 CCDC144CPQ8IYA2 1237 aa13.99□□□□□ -0.17
RBM39-202ENST00000338163 ZSCAN31Q96LW9 406 aaPredicted RBP13.99□□□□□ -0.17
RBM39-202ENST00000338163 DDX41Q9UJV9 622 aaKnown RBP13.99□□□□□ -0.17
RBM39-202ENST00000338163 TPCN1Q9ULQ1 816 aa13.99□□□□□ -0.17
RBM39-202ENST00000338163 PAXBP1Q9Y5B6 917 aa13.99□□□□□ -0.17
RBM39-202ENST00000338163 EPB41L2O43491 1005 aaKnown RBP13.98□□□□□ -0.17
RBM39-202ENST00000338163 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
RBM39-202ENST00000338163 SSH3Q8TE77 659 aa13.98□□□□□ -0.17
RBM39-202ENST00000338163 ANKRD24Q8TF21 1146 aa13.98□□□□□ -0.17
RBM39-202ENST00000338163 RUFY2Q8WXA3 655 aa13.98□□□□□ -0.17
RBM39-202ENST00000338163 COL16A1Q07092 1604 aaPredicted RBP13.98□□□□□ -0.17
RBM39-202ENST00000338163 PEAK1Q9H792 1746 aa13.98□□□□□ -0.17
RBM39-202ENST00000338163 GOLGA6L19H0YKK7 550 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms