RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 NECAB1Q8N987 351 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 CCDC39Q9UFE4 941 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 OVOS2A0A0G2JMS6 1433 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 ZKSCAN1P17029 563 aaPredicted RBP21.32■■□□□ 1
IFFO1-201ENST00000336604 CCDC183Q5T5S1 534 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 RIC3Q7Z5B4 369 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 BOLA2Q9H3K6 86 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 UTYO14607 1347 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 UBE2HP62256 183 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 CREB3L3Q68CJ9 461 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 KCNB2Q92953 911 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 TM6SF1Q9BZW5 370 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 DNM1Q05193 864 aaKnown RBP21.31■■□□□ 1
IFFO1-201ENST00000336604 MTMR6Q9Y217 621 aa21.31■■□□□ 1
IFFO1-201ENST00000336604 A0A0D9SFI3 127 aa21.3■■□□□ 1
IFFO1-201ENST00000336604 ZC3H6P61129 1189 aaKnown RBP21.3■■□□□ 1
IFFO1-201ENST00000336604 ZNF790Q6PG37 636 aa21.3■■□□□ 1
IFFO1-201ENST00000336604 MAP4K1Q92918 833 aa21.3■■□□□ 1
IFFO1-201ENST00000336604 ATP6V1DQ9Y5K8 247 aa21.3■■□□□ 1
IFFO1-201ENST00000336604 SH2B1Q9NRF2 756 aaPredicted RBP21.3■■□□□ 1
IFFO1-201ENST00000336604 TPCN1Q9ULQ1 816 aa21.3■■□□□ 1
IFFO1-201ENST00000336604 SLIT3O75094 1523 aa21.3■■□□□ 1
IFFO1-201ENST00000336604 VPS37CA5D8V6 355 aaPredicted RBP21.29■■□□□ 1
IFFO1-201ENST00000336604 PTMAP06454 111 aaKnown RBP21.29■■□□□ 1
IFFO1-201ENST00000336604 MPNDQ8N594 471 aa21.29■■□□□ 1
IFFO1-201ENST00000336604 TCEANC2Q96MN5 208 aa21.29■■□□□ 1
IFFO1-201ENST00000336604 ZSCAN31Q96LW9 406 aaPredicted RBP21.29■■□□□ 1
IFFO1-201ENST00000336604 FSD1Q9BTV5 496 aa21.29■■□□□ 1
IFFO1-201ENST00000336604 TAF6LQ9Y6J9 622 aa21.29■■□□□ 1
IFFO1-201ENST00000336604 ERBB3P21860 1342 aa21.29■■□□□ 1
IFFO1-201ENST00000336604 HCLS1P14317 486 aaPredicted RBP21.28■■□□□ 1
IFFO1-201ENST00000336604 EPHA10Q5JZY3 1008 aa21.28■■□□□ 1
IFFO1-201ENST00000336604 USP25Q9UHP3 1055 aa21.28■■□□□ 1
IFFO1-201ENST00000336604 SLC27A2O14975 620 aa21.28■■□□□ 1
IFFO1-201ENST00000336604 KRT28Q7Z3Y7 464 aa21.28■■□□□ 1
IFFO1-201ENST00000336604 NEURL1BA8MQ27 555 aa21.27■■□□□ 1
IFFO1-201ENST00000336604 MCM5P33992 734 aa21.27■■□□□ 1
IFFO1-201ENST00000336604 PIP4K2AP48426 406 aaPredicted RBP21.27■■□□□ 1
IFFO1-201ENST00000336604 NFATC2IPQ8NCF5 419 aa21.27■■□□□ 1
IFFO1-201ENST00000336604 XAGE3Q8WTP9 111 aa21.27■■□□□ 1
IFFO1-201ENST00000336604 JARID2Q92833 1246 aaPredicted RBP21.27■■□□□ 1
IFFO1-201ENST00000336604 TERF1P54274 439 aa21.27■■□□□ 1
IFFO1-201ENST00000336604 COPS6Q7L5N1 327 aa21.27■■□□□ 1
IFFO1-201ENST00000336604 FAM184AQ8NB25 1140 aa21.27■■□□□ 1
IFFO1-201ENST00000336604 EDC3Q96F86 508 aaKnown RBP21.27■■□□□ 1
IFFO1-201ENST00000336604 PRDM4Q9UKN5 801 aa21.27■■□□□ 1
IFFO1-201ENST00000336604 HIP1O00291 1037 aa21.26■□□□□ 0.99
IFFO1-201ENST00000336604 LARP1Q6PKG0 1096 aaKnown RBP21.26■□□□□ 0.99
IFFO1-201ENST00000336604 MYD88Q99836 296 aa21.26■□□□□ 0.99
IFFO1-201ENST00000336604 NEXNQ0ZGT2 675 aa21.26■□□□□ 0.99
IFFO1-201ENST00000336604 GCKRQ14397 625 aa21.26■□□□□ 0.99
IFFO1-201ENST00000336604 ZNF589Q86UQ0 364 aaPredicted RBP21.26■□□□□ 0.99
IFFO1-201ENST00000336604 GIMAP6Q6P9H5 292 aa21.25■□□□□ 0.99
IFFO1-201ENST00000336604 RAPGEF4Q8WZA2 1011 aa21.25■□□□□ 0.99
IFFO1-201ENST00000336604 SLC52A2Q9HAB3 445 aa21.25■□□□□ 0.99
IFFO1-201ENST00000336604 NLRP2Q9NX02 1062 aa21.25■□□□□ 0.99
IFFO1-201ENST00000336604 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.25■□□□□ 0.99
IFFO1-201ENST00000336604 NPHP3Q7Z494 1330 aa21.24■□□□□ 0.99
IFFO1-201ENST00000336604 ZNF496Q96IT1 587 aaPredicted RBP21.24■□□□□ 0.99
IFFO1-201ENST00000336604 FERMT3Q86UX7 667 aa21.24■□□□□ 0.99
IFFO1-201ENST00000336604 KDM6AO15550 1401 aaPredicted RBP21.24■□□□□ 0.99
IFFO1-201ENST00000336604 SIPA1L3O60292 1781 aaPredicted RBP21.24■□□□□ 0.99
IFFO1-201ENST00000336604 TRHP20396 242 aaPredicted RBP21.23■□□□□ 0.99
IFFO1-201ENST00000336604 MAP7D2Q96T17 732 aa21.23■□□□□ 0.99
IFFO1-201ENST00000336604 SNRKQ9NRH2 765 aa21.23■□□□□ 0.99
IFFO1-201ENST00000336604 NPHP4O75161 1426 aaPredicted RBP21.23■□□□□ 0.99
IFFO1-201ENST00000336604 LARP1BQ659C4 914 aaKnown RBP21.23■□□□□ 0.99
IFFO1-201ENST00000336604 FAM173BQ6P4H8 233 aa21.23■□□□□ 0.99
IFFO1-201ENST00000336604 PRDM10Q9NQV6 1147 aa21.23■□□□□ 0.99
IFFO1-201ENST00000336604 NDUFB9Q9Y6M9 179 aa21.23■□□□□ 0.99
IFFO1-201ENST00000336604 LETM1O95202 739 aaPredicted RBP21.22■□□□□ 0.99
IFFO1-201ENST00000336604 PSMA5P28066 241 aa21.22■□□□□ 0.99
IFFO1-201ENST00000336604 CDC37L1Q7L3B6 337 aa21.22■□□□□ 0.99
IFFO1-201ENST00000336604 UVSSAQ2YD98 709 aa21.22■□□□□ 0.99
IFFO1-201ENST00000336604 BLOC1S2Q6QNY1 142 aa21.22■□□□□ 0.99
IFFO1-201ENST00000336604 ZNF830Q96NB3 372 aaPredicted RBP21.22■□□□□ 0.99
IFFO1-201ENST00000336604 METTL22Q9BUU2 404 aaPredicted RBP21.22■□□□□ 0.99
IFFO1-201ENST00000336604 MED23Q9ULK4 1368 aa21.22■□□□□ 0.99
IFFO1-201ENST00000336604 USP16Q9Y5T5 823 aa21.22■□□□□ 0.99
IFFO1-201ENST00000336604 CAMTA1Q9Y6Y1 1673 aa21.21■□□□□ 0.99
IFFO1-201ENST00000336604 ADCY5O95622 1261 aa21.21■□□□□ 0.99
IFFO1-201ENST00000336604 PHKG2P15735 406 aa21.21■□□□□ 0.99
IFFO1-201ENST00000336604 RNF20Q5VTR2 975 aa21.21■□□□□ 0.99
IFFO1-201ENST00000336604 CHGBP05060 677 aa21.21■□□□□ 0.99
IFFO1-201ENST00000336604 CSPP1Q1MSJ5 1256 aa21.21■□□□□ 0.99
IFFO1-201ENST00000336604 ANKRD13DQ6ZTN6 518 aa21.21■□□□□ 0.99
IFFO1-201ENST00000336604 DBNLQ9UJU6 430 aaKnown RBP21.21■□□□□ 0.99
IFFO1-201ENST00000336604 RGPD5Q99666 1765 aa21.2■□□□□ 0.98
IFFO1-201ENST00000336604 FUCA2Q9BTY2 467 aa21.2■□□□□ 0.98
IFFO1-201ENST00000336604 RPS6KB1P23443 525 aa21.2■□□□□ 0.98
IFFO1-201ENST00000336604 STK3Q13188 491 aa21.2■□□□□ 0.98
IFFO1-201ENST00000336604 TOB2Q14106 344 aaPredicted RBP21.2■□□□□ 0.98
IFFO1-201ENST00000336604 CHMP3Q9Y3E7 222 aa21.2■□□□□ 0.98
IFFO1-201ENST00000336604 TTC6Q86TZ1 520 aa21.19■□□□□ 0.98
IFFO1-201ENST00000336604 DDX17Q92841 729 aaKnown RBP21.19■□□□□ 0.98
IFFO1-201ENST00000336604 C5P01031 1676 aa21.19■□□□□ 0.98
IFFO1-201ENST00000336604 ADAMTS7Q9UKP4 1686 aa21.19■□□□□ 0.98
IFFO1-201ENST00000336604 TAF5LO75529 589 aa21.19■□□□□ 0.98
IFFO1-201ENST00000336604 PLCB2Q00722 1185 aa21.19■□□□□ 0.98
IFFO1-201ENST00000336604 TFCP2Q12800 502 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms