RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 FERMT3Q86UX7 667 aa17.85■□□□□ 0.45
UBA1-201ENST00000335972 RUFY2Q8WXA3 655 aa17.85■□□□□ 0.45
UBA1-201ENST00000335972 DNAJC2Q99543 621 aaKnown RBP17.85■□□□□ 0.45
UBA1-201ENST00000335972 TCHHQ07283 1943 aa17.85■□□□□ 0.45
UBA1-201ENST00000335972 HEG1Q9ULI3 1381 aa17.84■□□□□ 0.45
UBA1-201ENST00000335972 MEGF6O75095 1541 aa17.84■□□□□ 0.45
UBA1-201ENST00000335972 GJB2P29033 226 aa17.84■□□□□ 0.45
UBA1-201ENST00000335972 FAM173BQ6P4H8 233 aa17.84■□□□□ 0.45
UBA1-201ENST00000335972 CCDC129Q6ZRS4 1044 aa17.84■□□□□ 0.45
UBA1-201ENST00000335972 EVI5LQ96CN4 794 aa17.84■□□□□ 0.45
UBA1-201ENST00000335972 WDR33Q9C0J8 1336 aaKnown RBP17.84■□□□□ 0.45
UBA1-201ENST00000335972 TFCP2Q12800 502 aa17.84■□□□□ 0.45
UBA1-201ENST00000335972 LRSAM1Q6UWE0 723 aa17.84■□□□□ 0.45
UBA1-201ENST00000335972 ERC1Q8IUD2 1116 aa17.84■□□□□ 0.45
UBA1-201ENST00000335972 LMO7Q8WWI1 1683 aa17.84■□□□□ 0.45
UBA1-201ENST00000335972 CREB3L3Q68CJ9 461 aa17.84■□□□□ 0.45
UBA1-201ENST00000335972 USP54Q70EL1 1684 aa17.83■□□□□ 0.45
UBA1-201ENST00000335972 SEC62Q99442 399 aaKnown RBP17.83■□□□□ 0.45
UBA1-201ENST00000335972 CCDC171Q6TFL3 1326 aa17.83■□□□□ 0.45
UBA1-201ENST00000335972 STX6O43752 255 aa17.83■□□□□ 0.44
UBA1-201ENST00000335972 ME3Q16798 604 aa17.83■□□□□ 0.44
UBA1-201ENST00000335972 IFNL2Q8IZJ0 200 aa17.83■□□□□ 0.44
UBA1-201ENST00000335972 CABP4P57796 275 aa17.83■□□□□ 0.44
UBA1-201ENST00000335972 TMEM94Q12767 1356 aa17.83■□□□□ 0.44
UBA1-201ENST00000335972 CYP46A1Q9Y6A2 500 aa17.83■□□□□ 0.44
UBA1-201ENST00000335972 A0A087WZG4 1122 aa17.82■□□□□ 0.44
UBA1-201ENST00000335972 ST3GAL1Q11201 340 aa17.82■□□□□ 0.44
UBA1-201ENST00000335972 PPFIA3O75145 1194 aa17.82■□□□□ 0.44
UBA1-201ENST00000335972 PPP1R9BQ96SB3 815 aa17.82■□□□□ 0.44
UBA1-201ENST00000335972 METTL22Q9BUU2 404 aaPredicted RBP17.82■□□□□ 0.44
UBA1-201ENST00000335972 USP42Q9H9J4 1324 aaKnown RBP17.81■□□□□ 0.44
UBA1-201ENST00000335972 ZSCAN22P10073 491 aaPredicted RBP17.81■□□□□ 0.44
UBA1-201ENST00000335972 TPCN1Q9ULQ1 816 aa17.81■□□□□ 0.44
UBA1-201ENST00000335972 DNM1Q05193 864 aaKnown RBP17.81■□□□□ 0.44
UBA1-201ENST00000335972 MBD3O95983 291 aa17.81■□□□□ 0.44
UBA1-201ENST00000335972 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
UBA1-201ENST00000335972 DBNLQ9UJU6 430 aaKnown RBP17.81■□□□□ 0.44
UBA1-201ENST00000335972 DDX46Q7L014 1031 aaKnown RBP17.8■□□□□ 0.44
UBA1-201ENST00000335972 DBNDD2Q9BQY9 259 aa17.8■□□□□ 0.44
UBA1-201ENST00000335972 SNRPA1P09661 255 aaKnown RBP17.8■□□□□ 0.44
UBA1-201ENST00000335972 ZKSCAN1P17029 563 aaPredicted RBP17.8■□□□□ 0.44
UBA1-201ENST00000335972 NECTIN1Q15223 517 aa17.8■□□□□ 0.44
UBA1-201ENST00000335972 LRRC2Q9BYS8 371 aa17.8■□□□□ 0.44
UBA1-201ENST00000335972 NCAPD2Q15021 1401 aa17.8■□□□□ 0.44
UBA1-201ENST00000335972 SLC27A2O14975 620 aa17.8■□□□□ 0.44
UBA1-201ENST00000335972 ZBTB3Q9H5J0 574 aa17.8■□□□□ 0.44
UBA1-201ENST00000335972 SLIT3O75094 1523 aa17.8■□□□□ 0.44
UBA1-201ENST00000335972 FOSBP53539 338 aa17.79■□□□□ 0.44
UBA1-201ENST00000335972 TTLL7Q6ZT98 887 aa17.79■□□□□ 0.44
UBA1-201ENST00000335972 N4BP2Q86UW6 1770 aaPredicted RBP17.79■□□□□ 0.44
UBA1-201ENST00000335972 NEUROD6Q96NK8 337 aa17.79■□□□□ 0.44
UBA1-201ENST00000335972 A1BGP04217 495 aa17.79■□□□□ 0.44
UBA1-201ENST00000335972 LMBR1LQ6UX01 489 aa17.79■□□□□ 0.44
UBA1-201ENST00000335972 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.79■□□□□ 0.44
UBA1-201ENST00000335972 PLCB2Q00722 1185 aa17.78■□□□□ 0.44
UBA1-201ENST00000335972 F13A1P00488 732 aa17.78■□□□□ 0.44
UBA1-201ENST00000335972 PTPN12Q05209 780 aaKnown RBP17.78■□□□□ 0.44
UBA1-201ENST00000335972 ZNF594Q96JF6 807 aaPredicted RBP17.78■□□□□ 0.44
UBA1-201ENST00000335972 FMNL2Q96PY5 1086 aa17.78■□□□□ 0.44
UBA1-201ENST00000335972 TSPY26PQ9H489 355 aa17.78■□□□□ 0.44
UBA1-201ENST00000335972 ZSWIM6Q9HCJ5 1215 aa17.78■□□□□ 0.44
UBA1-201ENST00000335972 MSNP26038 577 aaKnown RBP17.78■□□□□ 0.44
UBA1-201ENST00000335972 ZSCAN30Q86W11 494 aa17.77■□□□□ 0.43
UBA1-201ENST00000335972 MAP4K1Q92918 833 aa17.77■□□□□ 0.43
UBA1-201ENST00000335972 STRN4Q9NRL3 753 aa17.77■□□□□ 0.43
UBA1-201ENST00000335972 LRP10Q7Z4F1 713 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 IL17RAQ96F46 866 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 HDAC5Q9UQL6 1122 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 UTYO14607 1347 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 NBPF26B4DH59 902 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 TIMM10P62072 90 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 TNNI3KQ59H18 835 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 NBPF14Q5TI25 921 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 VPS53Q5VIR6 699 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 NBPF10Q6P3W6 841 aaKnown RBP17.76■□□□□ 0.43
UBA1-201ENST00000335972 TOM1L2Q6ZVM7 507 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 NBPF15Q8N660 670 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 DCAF5Q96JK2 942 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 MTMR6Q9Y217 621 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 FPGT-TNNI3KV9GXZ4 949 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 GIMAP6Q6P9H5 292 aa17.76■□□□□ 0.43
UBA1-201ENST00000335972 HCLS1P14317 486 aaPredicted RBP17.75■□□□□ 0.43
UBA1-201ENST00000335972 RFX5P48382 616 aaPredicted RBP17.75■□□□□ 0.43
UBA1-201ENST00000335972 BLOC1S2Q6QNY1 142 aa17.75■□□□□ 0.43
UBA1-201ENST00000335972 CDC37L1Q7L3B6 337 aa17.75■□□□□ 0.43
UBA1-201ENST00000335972 ZNF830Q96NB3 372 aaPredicted RBP17.75■□□□□ 0.43
UBA1-201ENST00000335972 TFIP11Q9UBB9 837 aaKnown RBP17.75■□□□□ 0.43
UBA1-201ENST00000335972 C5P01031 1676 aa17.74■□□□□ 0.43
UBA1-201ENST00000335972 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.74■□□□□ 0.43
UBA1-201ENST00000335972 LARP1BQ659C4 914 aaKnown RBP17.74■□□□□ 0.43
UBA1-201ENST00000335972 PRDM11Q9NQV5 511 aa17.74■□□□□ 0.43
UBA1-201ENST00000335972 A0A0G2JLW4 131 aa17.74■□□□□ 0.43
UBA1-201ENST00000335972 PTMAP06454 111 aaKnown RBP17.74■□□□□ 0.43
UBA1-201ENST00000335972 COL15A1P39059 1388 aa17.74■□□□□ 0.43
UBA1-201ENST00000335972 DDX11Q96FC9 970 aa17.73■□□□□ 0.43
UBA1-201ENST00000335972 USP25Q9UHP3 1055 aa17.73■□□□□ 0.43
UBA1-201ENST00000335972 JAK2O60674 1132 aa17.73■□□□□ 0.43
UBA1-201ENST00000335972 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.73■□□□□ 0.43
UBA1-201ENST00000335972 NAP1L2Q9ULW6 460 aaPredicted RBP17.73■□□□□ 0.43
UBA1-201ENST00000335972 TRPM3Q9HCF6 1732 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms