RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 GOLGA1Q92805 767 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 GBP5Q96PP8 586 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 Q9H521 79 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 GEMIN8Q9NWZ8 242 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 DKK3Q9UBP4 350 aa6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 DDX41Q9UJV9 622 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-201ENST00000334218 KTN1Q86UP2 1357 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 TMEM232C9JQI7 657 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 ST13P50502 369 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 AFAP1Q8N556 730 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 KLHDC4Q8TBB5 520 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 RUFY2Q8WXA3 655 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 TSPY26PQ9H489 355 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 ACRBPQ8NEB7 543 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 OGFRQ9NZT2 677 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 GOLGA8AA7E2F4 631 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 TPD52L2O43399 206 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 PRPF4BQ13523 1007 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 GRAMD4Q6IC98 578 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 ARHGAP24Q8N264 748 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 CCDC18Q5T9S5 1454 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 RIOK1Q9BRS2 568 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 JADE2Q9NQC1 790 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 SCINQ9Y6U3 715 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 LRRD1A4D1F6 860 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 KDM1AO60341 852 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 SF3B2Q13435 895 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 TRPC3Q13507 836 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 ATG3Q9NT62 314 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 WDR91A4D1P6 747 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 KRT82Q9NSB4 513 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 CCDC121Q6ZUS5 278 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 HDGFL2Q7Z4V5 671 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 FAM177A1Q8N128 213 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 SYNCQ9H7C4 482 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 KRT18P05783 430 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 IMMTQ16891 758 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 RINLQ6ZS11 566 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 MICALL1Q8N3F8 863 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 TRIM55Q9BYV6 548 aa6.93□□□□□ -1.3
CDC42BPA-201ENST00000334218 DIAPH2O60879 1101 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 GPATCH3Q96I76 525 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 HELLSQ9NRZ9 838 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 CTAGE15A4D2H0 777 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 KCNA1Q09470 495 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 NEDD9Q14511 834 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 IQCA1Q86XH1 822 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 XPOTO43592 962 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 RHOXF2BP0C7M4 288 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 SF3A3Q12874 501 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 BIRC2Q13490 618 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 RHOXF2Q9BQY4 288 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 PRDM5Q9NQX1 630 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 AXIN1O15169 862 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 CBFA2T2O43439 604 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 SMARCA5O60264 1052 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 RAP1GDS1P52306 607 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 CCDC186Q7Z3E2 898 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 GOLGA8QA0A0J9YX86 632 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 GOLGA8OA6NCC3 632 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 PALM3A6NDB9 673 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 GOLGA8NF8WBI6 632 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 CDKL5O76039 1030 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 MIS12Q9H081 205 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 CFAP100Q494V2 611 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 ANKRD45Q5TZF3 282 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 CTCFLQ8NI51 663 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 POGZQ7Z3K3 1410 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 KIF4AO95239 1232 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 CAVIN2O95810 425 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 SYF2O95926 243 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 CLCN1P35523 988 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 RASSF2P50749 326 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 IL1RL1Q01638 556 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 FLIIQ13045 1269 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 TRMT10CQ7L0Y3 403 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 CCDC89Q8N998 374 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 MTMR7Q9Y216 660 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 ZNF711Q9Y462 761 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 ARMC2Q8NEN0 867 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 TTC1Q99614 292 aa6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 NAA15Q9BXJ9 866 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-201ENST00000334218 TOPBP1Q92547 1522 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 ZSCAN12O43309 604 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 HVCN1Q96D96 273 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 PRKG1Q13976 671 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 CAPN9O14815 690 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 UAP1Q16222 522 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 SPZ1Q9BXG8 430 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 ROCK2O75116 1388 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 MCM10Q7L590 875 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 ARFGAP2Q8N6H7 521 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 SLC38A10Q9HBR0 1119 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 USO1O60763 962 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 VPS37AQ8NEZ2 397 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 LRRC45Q96CN5 670 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 NESP48681 1621 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 AQRO60306 1485 aaKnown RBP eCLIP6.91□□□□□ -1.31e-6■■■■■ 27.7
CDC42BPA-201ENST00000334218 RHOBTB1O94844 696 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms