RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 KCNB2Q92953 911 aa28.07■■■□□ 2.08
TSKU-201ENST00000333090 TCEANC2Q96MN5 208 aa28.07■■■□□ 2.08
TSKU-201ENST00000333090 THEMISQ8N1K5 641 aaPredicted RBP28.06■■■□□ 2.08
TSKU-201ENST00000333090 EIF4A1P60842 406 aaKnown RBP28.06■■■□□ 2.08
TSKU-201ENST00000333090 FAM227BQ96M60 508 aa28.06■■■□□ 2.08
TSKU-201ENST00000333090 DACT1Q9NYF0 836 aa28.06■■■□□ 2.08
TSKU-201ENST00000333090 DIP2AQ14689 1571 aa28.06■■■□□ 2.08
TSKU-201ENST00000333090 GOLGA6L4A6NEF3 574 aa28.05■■■□□ 2.08
TSKU-201ENST00000333090 EVI5LQ96CN4 794 aa28.05■■■□□ 2.08
TSKU-201ENST00000333090 TNMDQ9H2S6 317 aa28.05■■■□□ 2.08
TSKU-201ENST00000333090 DRC7Q8IY82 874 aa28.05■■■□□ 2.08
TSKU-201ENST00000333090 CRYBG1Q9Y4K1 1723 aa28.05■■■□□ 2.08
TSKU-201ENST00000333090 CCDC186Q7Z3E2 898 aa28.05■■■□□ 2.08
TSKU-201ENST00000333090 AACSQ86V21 672 aa28.05■■■□□ 2.08
TSKU-201ENST00000333090 SPDYE4A6NLX3 237 aa28.04■■■□□ 2.08
TSKU-201ENST00000333090 ANO6Q4KMQ2 910 aa28.04■■■□□ 2.08
TSKU-201ENST00000333090 TFIP11Q9UBB9 837 aaKnown RBP28.04■■■□□ 2.08
TSKU-201ENST00000333090 KCNQ3O43525 872 aa28.04■■■□□ 2.08
TSKU-201ENST00000333090 LGR6Q9HBX8 967 aa28.04■■■□□ 2.08
TSKU-201ENST00000333090 C9orf78Q9NZ63 289 aaPredicted RBP28.04■■■□□ 2.08
TSKU-201ENST00000333090 ELP1O95163 1332 aa28.03■■■□□ 2.08
TSKU-201ENST00000333090 PDCP20941 246 aa28.03■■■□□ 2.08
TSKU-201ENST00000333090 UTP14CQ5TAP6 766 aaKnown RBP28.03■■■□□ 2.08
TSKU-201ENST00000333090 NWD1Q149M9 1564 aa28.03■■■□□ 2.08
TSKU-201ENST00000333090 LRMPQ12912 555 aa28.03■■■□□ 2.08
TSKU-201ENST00000333090 CBX8Q9HC52 389 aa28.03■■■□□ 2.08
TSKU-201ENST00000333090 NMIQ13287 307 aaPredicted RBP28.02■■■□□ 2.08
TSKU-201ENST00000333090 SPATA32Q96LK8 384 aa28.02■■■□□ 2.08
TSKU-201ENST00000333090 PIK3C2AO00443 1686 aa28.02■■■□□ 2.08
TSKU-201ENST00000333090 ADCY9O60503 1353 aa28.01■■■□□ 2.08
TSKU-201ENST00000333090 PSMA5P28066 241 aa28.01■■■□□ 2.07
TSKU-201ENST00000333090 MAP4K1Q92918 833 aa28.01■■■□□ 2.07
TSKU-201ENST00000333090 SLC27A2O14975 620 aa28.01■■■□□ 2.07
TSKU-201ENST00000333090 TRHP20396 242 aaPredicted RBP28.01■■■□□ 2.07
TSKU-201ENST00000333090 MTX1Q13505 466 aa28.01■■■□□ 2.07
TSKU-201ENST00000333090 TRIM5Q9C035 493 aa28.01■■■□□ 2.07
TSKU-201ENST00000333090 NRBP1Q9UHY1 535 aa28.01■■■□□ 2.07
TSKU-201ENST00000333090 C16orf45Q96MC5 204 aaPredicted RBP28■■■□□ 2.07
TSKU-201ENST00000333090 BLOC1S2Q6QNY1 142 aa28■■■□□ 2.07
TSKU-201ENST00000333090 ANKRD7Q92527 254 aa28■■■□□ 2.07
TSKU-201ENST00000333090 SCAND2PQ9GZW5 306 aaPredicted RBP28■■■□□ 2.07
TSKU-201ENST00000333090 CTIFO43310 598 aaKnown RBP27.99■■■□□ 2.07
TSKU-201ENST00000333090 U2AF2P26368 475 aaKnown RBP eCLIP27.99■■■□□ 2.07
TSKU-201ENST00000333090 ERC1Q8IUD2 1116 aa27.99■■■□□ 2.07
TSKU-201ENST00000333090 STK3Q13188 491 aa27.99■■■□□ 2.07
TSKU-201ENST00000333090 LARP1Q6PKG0 1096 aaKnown RBP27.99■■■□□ 2.07
TSKU-201ENST00000333090 CEMIPQ8WUJ3 1361 aa27.98■■■□□ 2.07
TSKU-201ENST00000333090 PDIA4P13667 645 aaKnown RBP27.98■■■□□ 2.07
TSKU-201ENST00000333090 NPHP3Q7Z494 1330 aa27.98■■■□□ 2.07
TSKU-201ENST00000333090 HOXB7P09629 217 aa27.98■■■□□ 2.07
TSKU-201ENST00000333090 CCDC8Q9H0W5 538 aaPredicted RBP27.98■■■□□ 2.07
TSKU-201ENST00000333090 MAP3K2Q9Y2U5 619 aa27.98■■■□□ 2.07
TSKU-201ENST00000333090 TAF6LQ9Y6J9 622 aa27.98■■■□□ 2.07
TSKU-201ENST00000333090 ARHGAP23Q9P227 1491 aa27.97■■■□□ 2.07
TSKU-201ENST00000333090 DDX19AQ9NUU7 478 aaKnown RBP27.97■■■□□ 2.07
TSKU-201ENST00000333090 LEO1Q8WVC0 666 aaPredicted RBP27.97■■■□□ 2.07
TSKU-201ENST00000333090 A0A0D9SFI3 127 aa27.96■■■□□ 2.07
TSKU-201ENST00000333090 CWF19L2Q2TBE0 894 aaKnown RBP27.96■■■□□ 2.07
TSKU-201ENST00000333090 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.96■■■□□ 2.07
TSKU-201ENST00000333090 ANKRD1Q15327 319 aa27.96■■■□□ 2.07
TSKU-201ENST00000333090 BICD2Q8TD16 824 aa27.96■■■□□ 2.07
TSKU-201ENST00000333090 SETD1BQ9UPS6 1966 aaKnown RBP27.96■■■□□ 2.07
TSKU-201ENST00000333090 SLIT1O75093 1534 aa27.95■■■□□ 2.07
TSKU-201ENST00000333090 HIP1O00291 1037 aa27.95■■■□□ 2.07
TSKU-201ENST00000333090 ZNF75DP51815 510 aa27.95■■■□□ 2.07
TSKU-201ENST00000333090 RNF20Q5VTR2 975 aa27.95■■■□□ 2.07
TSKU-201ENST00000333090 CHMP4AQ9BY43 222 aa27.95■■■□□ 2.07
TSKU-201ENST00000333090 NR1I2O75469 434 aa27.95■■■□□ 2.06
TSKU-201ENST00000333090 TEFQ10587 303 aa27.95■■■□□ 2.06
TSKU-201ENST00000333090 EAF2Q96CJ1 260 aaPredicted RBP27.95■■■□□ 2.06
TSKU-201ENST00000333090 FSD1Q9BTV5 496 aa27.95■■■□□ 2.06
TSKU-201ENST00000333090 CLSTN2Q9H4D0 955 aa27.95■■■□□ 2.06
TSKU-201ENST00000333090 BTBD11A6QL63 1104 aa27.94■■■□□ 2.06
TSKU-201ENST00000333090 ZNF165P49910 485 aa27.94■■■□□ 2.06
TSKU-201ENST00000333090 ZSCAN25Q6NSZ9 544 aa27.94■■■□□ 2.06
TSKU-201ENST00000333090 DNAJC25Q9H1X3 360 aa27.94■■■□□ 2.06
TSKU-201ENST00000333090 BOLA2Q9H3K6 86 aa27.94■■■□□ 2.06
TSKU-201ENST00000333090 RPS6KB1P23443 525 aa27.94■■■□□ 2.06
TSKU-201ENST00000333090 TOB2Q14106 344 aaPredicted RBP27.93■■■□□ 2.06
TSKU-201ENST00000333090 PLA2G4DQ86XP0 818 aa27.93■■■□□ 2.06
TSKU-201ENST00000333090 GTPBP4Q9BZE4 634 aaKnown RBP27.93■■■□□ 2.06
TSKU-201ENST00000333090 DBF4Q9UBU7 674 aaPredicted RBP27.93■■■□□ 2.06
TSKU-201ENST00000333090 TLR7Q9NYK1 1049 aaKnown RBP27.93■■■□□ 2.06
TSKU-201ENST00000333090 TNNT1P13805 278 aa27.92■■■□□ 2.06
TSKU-201ENST00000333090 NCBP1Q09161 790 aaKnown RBP27.92■■■□□ 2.06
TSKU-201ENST00000333090 LRRC59Q96AG4 307 aaKnown RBP27.92■■■□□ 2.06
TSKU-201ENST00000333090 SASH1O94885 1247 aa27.92■■■□□ 2.06
TSKU-201ENST00000333090 TDRD7Q8NHU6 1098 aaKnown RBP27.92■■■□□ 2.06
TSKU-201ENST00000333090 G3BP1Q13283 466 aaKnown RBP eCLIP27.91■■■□□ 2.06
TSKU-201ENST00000333090 PROSER3Q2NL68 480 aa27.91■■■□□ 2.06
TSKU-201ENST00000333090 ALDH1L1O75891 902 aa27.91■■■□□ 2.06
TSKU-201ENST00000333090 RBM43Q6ZSC3 357 aaKnown RBP27.91■■■□□ 2.06
TSKU-201ENST00000333090 CLIP2Q9UDT6 1046 aa27.91■■■□□ 2.06
TSKU-201ENST00000333090 ESCO1Q5FWF5 840 aa27.91■■■□□ 2.06
TSKU-201ENST00000333090 NBPF6Q5VWK0 638 aa27.91■■■□□ 2.06
TSKU-201ENST00000333090 PGBD1Q96JS3 809 aa27.91■■■□□ 2.06
TSKU-201ENST00000333090 NBPF4Q96M43 638 aa27.91■■■□□ 2.06
TSKU-201ENST00000333090 SIL1Q9H173 461 aa27.91■■■□□ 2.06
TSKU-201ENST00000333090 PHF8Q9UPP1 1060 aa27.9■■■□□ 2.06
TSKU-201ENST00000333090 MPRIPQ6WCQ1 1025 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms