RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 PDRG1Q9NUG6 133 aa16.14■□□□□ 0.17
TUBA1B-201ENST00000332858 SIPA1L3O60292 1781 aaPredicted RBP16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 NEURL1BA8MQ27 555 aa16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 RUFY2Q8WXA3 655 aa16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 MYD88Q99836 296 aa16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 ZSWIM6Q9HCJ5 1215 aa16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 SMC3Q9UQE7 1217 aa16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 RBM8AQ9Y5S9 174 aaKnown RBP16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 NDUFB9Q9Y6M9 179 aa16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 CCDC171Q6TFL3 1326 aa16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 DDX58O95786 925 aaKnown RBP16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 CHGBP05060 677 aa16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 ME3Q16798 604 aa16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 GPATCH3Q96I76 525 aa16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 NPHP3Q7Z494 1330 aa16.13■□□□□ 0.17
TUBA1B-201ENST00000332858 GJB2P29033 226 aa16.12■□□□□ 0.17
TUBA1B-201ENST00000332858 RAPGEF4Q8WZA2 1011 aa16.12■□□□□ 0.17
TUBA1B-201ENST00000332858 OVOS2A0A0G2JMS6 1433 aa16.12■□□□□ 0.17
TUBA1B-201ENST00000332858 GCKRQ14397 625 aa16.12■□□□□ 0.17
TUBA1B-201ENST00000332858 CREB3L3Q68CJ9 461 aa16.12■□□□□ 0.17
TUBA1B-201ENST00000332858 PHKG2P15735 406 aa16.12■□□□□ 0.17
TUBA1B-201ENST00000332858 FIBPO43427 364 aa16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 CHRNA2Q15822 529 aa16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 VPS53Q5VIR6 699 aa16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 MAP4K1Q92918 833 aa16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 KCNB2Q92953 911 aa16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 TRPM3Q9HCF6 1732 aaPredicted RBP16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 F13A1P00488 732 aa16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 MSNP26038 577 aaKnown RBP16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 LRP10Q7Z4F1 713 aa16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 ZNF589Q86UQ0 364 aaPredicted RBP16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 TSPY26PQ9H489 355 aa16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 TPCN1Q9ULQ1 816 aa16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 CYP46A1Q9Y6A2 500 aa16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 C1orf167Q5SNV9 1468 aa16.11■□□□□ 0.17
TUBA1B-201ENST00000332858 LARP1Q6PKG0 1096 aaKnown RBP16.1■□□□□ 0.17
TUBA1B-201ENST00000332858 ZNF142P52746 1687 aaPredicted RBP16.1■□□□□ 0.17
TUBA1B-201ENST00000332858 KCNJ4P48050 445 aa16.1■□□□□ 0.17
TUBA1B-201ENST00000332858 C5P01031 1676 aa16.1■□□□□ 0.17
TUBA1B-201ENST00000332858 DNM1Q05193 864 aaKnown RBP16.1■□□□□ 0.17
TUBA1B-201ENST00000332858 MPNDQ8N594 471 aa16.1■□□□□ 0.17
TUBA1B-201ENST00000332858 FSD1Q9BTV5 496 aa16.1■□□□□ 0.17
TUBA1B-201ENST00000332858 NOL7Q9UMY1 257 aaKnown RBP16.1■□□□□ 0.17
TUBA1B-201ENST00000332858 MTMR6Q9Y217 621 aa16.1■□□□□ 0.17
TUBA1B-201ENST00000332858 MEGF6O75095 1541 aa16.09■□□□□ 0.17
TUBA1B-201ENST00000332858 ATP5J2-PTCD1G3V325 749 aa16.09■□□□□ 0.17
TUBA1B-201ENST00000332858 SLC27A2O14975 620 aa16.09■□□□□ 0.17
TUBA1B-201ENST00000332858 CYP27B1O15528 508 aa16.09■□□□□ 0.17
TUBA1B-201ENST00000332858 PTCD1O75127 700 aaKnown RBP16.09■□□□□ 0.17
TUBA1B-201ENST00000332858 TMEM87AQ8NBN3 555 aa16.09■□□□□ 0.17
TUBA1B-201ENST00000332858 CAMTA1Q9Y6Y1 1673 aa16.09■□□□□ 0.17
TUBA1B-201ENST00000332858 ANKRD13DQ6ZTN6 518 aa16.09■□□□□ 0.17
TUBA1B-201ENST00000332858 METTL22Q9BUU2 404 aaPredicted RBP16.09■□□□□ 0.17
TUBA1B-201ENST00000332858 TM6SF1Q9BZW5 370 aa16.09■□□□□ 0.17
TUBA1B-201ENST00000332858 HDAC5Q9UQL6 1122 aa16.08■□□□□ 0.17
TUBA1B-201ENST00000332858 NEXNQ0ZGT2 675 aa16.08■□□□□ 0.16
TUBA1B-201ENST00000332858 C19orf44Q9H6X5 657 aa16.08■□□□□ 0.16
TUBA1B-201ENST00000332858 ZKSCAN1P17029 563 aaPredicted RBP16.08■□□□□ 0.16
TUBA1B-201ENST00000332858 TATP17735 454 aaPredicted RBP16.08■□□□□ 0.16
TUBA1B-201ENST00000332858 DBNLQ9UJU6 430 aaKnown RBP16.08■□□□□ 0.16
TUBA1B-201ENST00000332858 ADAMTS7Q9UKP4 1686 aa16.07■□□□□ 0.16
TUBA1B-201ENST00000332858 CSB-PGBD3P0DP91 1061 aa16.07■□□□□ 0.16
TUBA1B-201ENST00000332858 FAM173BQ6P4H8 233 aa16.07■□□□□ 0.16
TUBA1B-201ENST00000332858 UBE3BQ7Z3V4 1068 aa16.07■□□□□ 0.16
TUBA1B-201ENST00000332858 SYAP1Q96A49 352 aaPredicted RBP16.07■□□□□ 0.16
TUBA1B-201ENST00000332858 VPS37CA5D8V6 355 aaPredicted RBP16.07■□□□□ 0.16
TUBA1B-201ENST00000332858 PTPN12Q05209 780 aaKnown RBP16.07■□□□□ 0.16
TUBA1B-201ENST00000332858 HS1BP3Q53T59 392 aa16.07■□□□□ 0.16
TUBA1B-201ENST00000332858 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
TUBA1B-201ENST00000332858 TFCP2Q12800 502 aa16.06■□□□□ 0.16
TUBA1B-201ENST00000332858 COL15A1P39059 1388 aa16.06■□□□□ 0.16
TUBA1B-201ENST00000332858 FERMT3Q86UX7 667 aa16.06■□□□□ 0.16
TUBA1B-201ENST00000332858 CCDC9Q9Y3X0 531 aaKnown RBP16.06■□□□□ 0.16
TUBA1B-201ENST00000332858 IFNL2Q8IZJ0 200 aa16.06■□□□□ 0.16
TUBA1B-201ENST00000332858 OFD1O75665 1012 aa16.05■□□□□ 0.16
TUBA1B-201ENST00000332858 UBE2HP62256 183 aa16.05■□□□□ 0.16
TUBA1B-201ENST00000332858 SEC62Q99442 399 aaKnown RBP16.05■□□□□ 0.16
TUBA1B-201ENST00000332858 SCN11AQ9UI33 1791 aa16.05■□□□□ 0.16
TUBA1B-201ENST00000332858 HCLS1P14317 486 aaPredicted RBP16.05■□□□□ 0.16
TUBA1B-201ENST00000332858 SNRKQ9NRH2 765 aa16.05■□□□□ 0.16
TUBA1B-201ENST00000332858 ZKSCAN5Q9Y2L8 839 aa16.05■□□□□ 0.16
TUBA1B-201ENST00000332858 SNRPA1P09661 255 aaKnown RBP16.04■□□□□ 0.16
TUBA1B-201ENST00000332858 CCDC183Q5T5S1 534 aa16.04■□□□□ 0.16
TUBA1B-201ENST00000332858 CCDC129Q6ZRS4 1044 aa16.04■□□□□ 0.16
TUBA1B-201ENST00000332858 ZSCAN31Q96LW9 406 aaPredicted RBP16.04■□□□□ 0.16
TUBA1B-201ENST00000332858 SH2B1Q9NRF2 756 aaPredicted RBP16.04■□□□□ 0.16
TUBA1B-201ENST00000332858 MED23Q9ULK4 1368 aa16.04■□□□□ 0.16
TUBA1B-201ENST00000332858 SLFNL1Q499Z3 407 aa16.04■□□□□ 0.16
TUBA1B-201ENST00000332858 GIMAP6Q6P9H5 292 aa16.04■□□□□ 0.16
TUBA1B-201ENST00000332858 CDC37L1Q7L3B6 337 aa16.04■□□□□ 0.16
TUBA1B-201ENST00000332858 COPRSQ9NQ92 184 aa16.04■□□□□ 0.16
TUBA1B-201ENST00000332858 TAF5LO75529 589 aa16.03■□□□□ 0.16
TUBA1B-201ENST00000332858 STK3Q13188 491 aa16.03■□□□□ 0.16
TUBA1B-201ENST00000332858 TOB2Q14106 344 aaPredicted RBP16.03■□□□□ 0.16
TUBA1B-201ENST00000332858 TTC5Q8N0Z6 440 aa16.03■□□□□ 0.16
TUBA1B-201ENST00000332858 TNNI3KQ59H18 835 aa16.03■□□□□ 0.16
TUBA1B-201ENST00000332858 DBNDD2Q9BQY9 259 aa16.03■□□□□ 0.16
TUBA1B-201ENST00000332858 USP25Q9UHP3 1055 aa16.03■□□□□ 0.16
TUBA1B-201ENST00000332858 FPGT-TNNI3KV9GXZ4 949 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms