RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 FAM114A2Q9NRY5 505 aa18.75■□□□□ 0.59
PTCH1-201ENST00000331920 ZNF213O14771 459 aa18.75■□□□□ 0.59
PTCH1-201ENST00000331920 MCM4P33991 863 aa18.75■□□□□ 0.59
PTCH1-201ENST00000331920 UAP1Q16222 522 aaPredicted RBP18.75■□□□□ 0.59
PTCH1-201ENST00000331920 TRIM7Q9C029 511 aa18.75■□□□□ 0.59
PTCH1-201ENST00000331920 PPP2R5CQ13362 524 aa18.75■□□□□ 0.59
PTCH1-201ENST00000331920 RPGRQ92834 1020 aaKnown RBP18.75■□□□□ 0.59
PTCH1-201ENST00000331920 SMARCA5O60264 1052 aaPredicted RBP18.74■□□□□ 0.59
PTCH1-201ENST00000331920 ZFYP08048 801 aaPredicted RBP18.74■□□□□ 0.59
PTCH1-201ENST00000331920 DACT3Q96B18 629 aaPredicted RBP18.74■□□□□ 0.59
PTCH1-201ENST00000331920 PLVAPQ9BX97 442 aa18.74■□□□□ 0.59
PTCH1-201ENST00000331920 TTC12Q9H892 705 aaPredicted RBP18.74■□□□□ 0.59
PTCH1-201ENST00000331920 ZEB2O60315 1214 aa18.74■□□□□ 0.59
PTCH1-201ENST00000331920 RAB11FIP4Q86YS3 637 aa18.74■□□□□ 0.59
PTCH1-201ENST00000331920 CCDC121Q6ZUS5 278 aa18.74■□□□□ 0.59
PTCH1-201ENST00000331920 EXOC6BQ9Y2D4 811 aa18.73■□□□□ 0.59
PTCH1-201ENST00000331920 MIS18AQ9NYP9 233 aa18.73■□□□□ 0.59
PTCH1-201ENST00000331920 ATF7IPQ6VMQ6 1270 aa18.73■□□□□ 0.59
PTCH1-201ENST00000331920 TRIM47Q96LD4 638 aa18.73■□□□□ 0.59
PTCH1-201ENST00000331920 CCDC114Q96M63 670 aa18.72■□□□□ 0.59
PTCH1-201ENST00000331920 SEPT10Q9P0V9 454 aa18.72■□□□□ 0.59
PTCH1-201ENST00000331920 FAM169AQ9Y6X4 670 aa18.72■□□□□ 0.59
PTCH1-201ENST00000331920 TBCAO75347 108 aaKnown RBP18.72■□□□□ 0.59
PTCH1-201ENST00000331920 PROSER2Q86WR7 435 aaPredicted RBP18.72■□□□□ 0.59
PTCH1-201ENST00000331920 PTCD1O75127 700 aaKnown RBP18.72■□□□□ 0.59
PTCH1-201ENST00000331920 IFIT1P09914 478 aaKnown RBP18.72■□□□□ 0.59
PTCH1-201ENST00000331920 CAPZA3Q96KX2 299 aa18.72■□□□□ 0.59
PTCH1-201ENST00000331920 GDPD2Q9HCC8 539 aa18.72■□□□□ 0.59
PTCH1-201ENST00000331920 ZNF652Q9Y2D9 606 aa18.72■□□□□ 0.59
PTCH1-201ENST00000331920 FHOD3Q2V2M9 1422 aa18.71■□□□□ 0.59
PTCH1-201ENST00000331920 ADCY5O95622 1261 aa18.71■□□□□ 0.59
PTCH1-201ENST00000331920 CUL4BQ13620 913 aa18.71■□□□□ 0.59
PTCH1-201ENST00000331920 TTF1Q15361 905 aaPredicted RBP18.71■□□□□ 0.59
PTCH1-201ENST00000331920 PLS1Q14651 629 aa18.71■□□□□ 0.59
PTCH1-201ENST00000331920 STX1AQ16623 288 aa18.71■□□□□ 0.59
PTCH1-201ENST00000331920 LRRC43Q8N309 656 aa18.71■□□□□ 0.59
PTCH1-201ENST00000331920 STIM2Q9P246 746 aa18.71■□□□□ 0.59
PTCH1-201ENST00000331920 STARD3NLO95772 234 aa18.71■□□□□ 0.59
PTCH1-201ENST00000331920 MAK16Q9BXY0 300 aaKnown RBP18.71■□□□□ 0.59
PTCH1-201ENST00000331920 AKAP2Q9Y2D5 859 aa18.71■□□□□ 0.59
PTCH1-201ENST00000331920 KIF5BP33176 963 aa18.7■□□□□ 0.58
PTCH1-201ENST00000331920 VPS52Q8N1B4 723 aa18.7■□□□□ 0.58
PTCH1-201ENST00000331920 TFIP11Q9UBB9 837 aaKnown RBP18.7■□□□□ 0.58
PTCH1-201ENST00000331920 BANK1Q8NDB2 785 aa18.7■□□□□ 0.58
PTCH1-201ENST00000331920 TACC3Q9Y6A5 838 aa18.7■□□□□ 0.58
PTCH1-201ENST00000331920 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.7■□□□□ 0.58
PTCH1-201ENST00000331920 PPANQ9NQ55 473 aaKnown RBP18.7■□□□□ 0.58
PTCH1-201ENST00000331920 CEP85LQ5SZL2 805 aa18.7■□□□□ 0.58
PTCH1-201ENST00000331920 STMN2Q93045 179 aa18.7■□□□□ 0.58
PTCH1-201ENST00000331920 CCDC172P0C7W6 258 aa18.69■□□□□ 0.58
PTCH1-201ENST00000331920 HSPA1LP34931 641 aa18.69■□□□□ 0.58
PTCH1-201ENST00000331920 AFMP43652 599 aa18.69■□□□□ 0.58
PTCH1-201ENST00000331920 CCDC129Q6ZRS4 1044 aa18.69■□□□□ 0.58
PTCH1-201ENST00000331920 MAP3K12Q12852 859 aa18.69■□□□□ 0.58
PTCH1-201ENST00000331920 MPHOSPH6Q99547 160 aaKnown RBP18.69■□□□□ 0.58
PTCH1-201ENST00000331920 GAS8O95995 478 aa18.69■□□□□ 0.58
PTCH1-201ENST00000331920 GSDMDP57764 484 aa18.69■□□□□ 0.58
PTCH1-201ENST00000331920 MRRFQ96E11 262 aaKnown RBP18.69■□□□□ 0.58
PTCH1-201ENST00000331920 AKR1B10O60218 316 aa18.69■□□□□ 0.58
PTCH1-201ENST00000331920 CPLX4Q7Z7G2 160 aa18.69■□□□□ 0.58
PTCH1-201ENST00000331920 ATP2A1O14983 1001 aa18.69■□□□□ 0.58
PTCH1-201ENST00000331920 UBA7P41226 1012 aa18.69■□□□□ 0.58
PTCH1-201ENST00000331920 BIRC2Q13490 618 aa18.68■□□□□ 0.58
PTCH1-201ENST00000331920 CCDC14Q49A88 953 aa18.68■□□□□ 0.58
PTCH1-201ENST00000331920 PPP1R21Q6ZMI0 780 aa18.68■□□□□ 0.58
PTCH1-201ENST00000331920 CPSF2Q9P2I0 782 aaKnown RBP18.68■□□□□ 0.58
PTCH1-201ENST00000331920 WDR63Q8IWG1 891 aa18.68■□□□□ 0.58
PTCH1-201ENST00000331920 IFT81Q8WYA0 676 aa18.68■□□□□ 0.58
PTCH1-201ENST00000331920 STMN4Q9H169 189 aaPredicted RBP18.68■□□□□ 0.58
PTCH1-201ENST00000331920 DDX27Q96GQ7 796 aaKnown RBP18.68■□□□□ 0.58
PTCH1-201ENST00000331920 N4BP3O15049 544 aa18.68■□□□□ 0.58
PTCH1-201ENST00000331920 CTAGE5O15320 804 aa18.68■□□□□ 0.58
PTCH1-201ENST00000331920 GABPAQ06546 454 aa18.68■□□□□ 0.58
PTCH1-201ENST00000331920 SWAP70Q9UH65 585 aa18.68■□□□□ 0.58
PTCH1-201ENST00000331920 CCDC77Q9BR77 488 aa18.67■□□□□ 0.58
PTCH1-201ENST00000331920 SCAND2PQ9GZW5 306 aaPredicted RBP18.67■□□□□ 0.58
PTCH1-201ENST00000331920 PPARDQ03181 441 aa18.67■□□□□ 0.58
PTCH1-201ENST00000331920 PRR16Q569H4 304 aa18.67■□□□□ 0.58
PTCH1-201ENST00000331920 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.67■□□□□ 0.58
PTCH1-201ENST00000331920 CLSTN2Q9H4D0 955 aa18.67■□□□□ 0.58
PTCH1-201ENST00000331920 PPME1Q9Y570 386 aa18.67■□□□□ 0.58
PTCH1-201ENST00000331920 AKNAQ7Z591 1439 aa18.67■□□□□ 0.58
PTCH1-201ENST00000331920 C6orf229H3BNL8 230 aa18.67■□□□□ 0.58
PTCH1-201ENST00000331920 CIB2O75838 187 aa18.67■□□□□ 0.58
PTCH1-201ENST00000331920 TTC31Q49AM3 519 aaPredicted RBP18.67■□□□□ 0.58
PTCH1-201ENST00000331920 MYD88Q99836 296 aa18.67■□□□□ 0.58
PTCH1-201ENST00000331920 KAT14Q9H8E8 782 aa18.67■□□□□ 0.58
PTCH1-201ENST00000331920 PPP1R7Q15435 360 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 TMEM67Q5HYA8 995 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 RRS1Q15050 365 aaKnown RBP18.66■□□□□ 0.58
PTCH1-201ENST00000331920 SPAG5Q96R06 1193 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 TSPY2A6NKD2 308 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 HGSO14964 777 aaPredicted RBP18.66■□□□□ 0.58
PTCH1-201ENST00000331920 FCHSD2O94868 740 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 PPP2R5DQ14738 602 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 TLDC2A0PJX2 215 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 SLC5A1P13866 664 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 STAC3Q96MF2 364 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 TCHPQ9BT92 498 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 NUF2Q9BZD4 464 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms