RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 TMX3Q96JJ7 454 aa20.37■□□□□ 0.85
PRKCD-201ENST00000330452 SYCE3A1L190 88 aa20.37■□□□□ 0.85
PRKCD-201ENST00000330452 CTR9Q6PD62 1173 aa20.37■□□□□ 0.85
PRKCD-201ENST00000330452 FAM43BQ6ZT52 329 aaPredicted RBP20.37■□□□□ 0.85
PRKCD-201ENST00000330452 SYCP1Q15431 976 aa20.36■□□□□ 0.85
PRKCD-201ENST00000330452 PPP1R42Q7Z4L9 355 aa20.36■□□□□ 0.85
PRKCD-201ENST00000330452 ANKRD24Q8TF21 1146 aa20.36■□□□□ 0.85
PRKCD-201ENST00000330452 STAP2Q9UGK3 403 aa20.36■□□□□ 0.85
PRKCD-201ENST00000330452 PRPF40AO75400 957 aaKnown RBP20.36■□□□□ 0.85
PRKCD-201ENST00000330452 CCDC172P0C7W6 258 aa20.36■□□□□ 0.85
PRKCD-201ENST00000330452 CYP2C19P33261 490 aa20.36■□□□□ 0.85
PRKCD-201ENST00000330452 IL25Q9H293 177 aa20.36■□□□□ 0.85
PRKCD-201ENST00000330452 LTN1O94822 1766 aa20.35■□□□□ 0.85
PRKCD-201ENST00000330452 RGPD2P0DJD1 1756 aa20.35■□□□□ 0.85
PRKCD-201ENST00000330452 MAP4K4O95819 1239 aaPredicted RBP20.35■□□□□ 0.85
PRKCD-201ENST00000330452 BABAM1Q9NWV8 329 aa20.35■□□□□ 0.85
PRKCD-201ENST00000330452 SURF6O75683 361 aaKnown RBP20.35■□□□□ 0.85
PRKCD-201ENST00000330452 GPT2Q8TD30 523 aa20.35■□□□□ 0.85
PRKCD-201ENST00000330452 SSH3Q8TE77 659 aa20.35■□□□□ 0.85
PRKCD-201ENST00000330452 ARHGEF25Q86VW2 580 aa20.34■□□□□ 0.85
PRKCD-201ENST00000330452 SRCIN1Q9C0H9 1055 aa20.34■□□□□ 0.85
PRKCD-201ENST00000330452 SOS1Q07889 1333 aaPredicted RBP20.34■□□□□ 0.85
PRKCD-201ENST00000330452 C1orf167Q5SNV9 1468 aa20.34■□□□□ 0.85
PRKCD-201ENST00000330452 NBPF7P0C2Y1 421 aaPredicted RBP20.34■□□□□ 0.85
PRKCD-201ENST00000330452 GUCY2CP25092 1073 aa20.34■□□□□ 0.85
PRKCD-201ENST00000330452 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
PRKCD-201ENST00000330452 CHPF2Q9P2E5 772 aa20.34■□□□□ 0.85
PRKCD-201ENST00000330452 EIF4A1P60842 406 aaKnown RBP20.33■□□□□ 0.85
PRKCD-201ENST00000330452 TMEM63CQ9P1W3 806 aa20.33■□□□□ 0.85
PRKCD-201ENST00000330452 MCCP23508 829 aa20.33■□□□□ 0.84
PRKCD-201ENST00000330452 UPF3BQ9BZI7 483 aaKnown RBP20.33■□□□□ 0.84
PRKCD-201ENST00000330452 KDM4FA0A1W2PPD8 638 aa20.32■□□□□ 0.84
PRKCD-201ENST00000330452 PRAMEF22A3QJZ6 481 aa20.32■□□□□ 0.84
PRKCD-201ENST00000330452 BRMS1Q9HCU9 246 aa20.32■□□□□ 0.84
PRKCD-201ENST00000330452 GYS2P54840 703 aa20.32■□□□□ 0.84
PRKCD-201ENST00000330452 CEP120Q8N960 986 aa20.32■□□□□ 0.84
PRKCD-201ENST00000330452 NLRP2Q9NX02 1062 aa20.32■□□□□ 0.84
PRKCD-201ENST00000330452 FAM53CQ9NYF3 392 aa20.32■□□□□ 0.84
PRKCD-201ENST00000330452 CEMIPQ8WUJ3 1361 aa20.32■□□□□ 0.84
PRKCD-201ENST00000330452 SRGAP3O43295 1099 aa20.31■□□□□ 0.84
PRKCD-201ENST00000330452 KCNH5Q8NCM2 988 aa20.31■□□□□ 0.84
PRKCD-201ENST00000330452 ZNF335Q9H4Z2 1342 aaPredicted RBP20.31■□□□□ 0.84
PRKCD-201ENST00000330452 TUBGCP6Q96RT7 1819 aa20.31■□□□□ 0.84
PRKCD-201ENST00000330452 PI4KAP2A4QPH2 592 aa20.31■□□□□ 0.84
PRKCD-201ENST00000330452 PI4KAP1Q8N8J0 262 aa20.31■□□□□ 0.84
PRKCD-201ENST00000330452 PXDNLA1KZ92 1463 aa20.31■□□□□ 0.84
PRKCD-201ENST00000330452 RHPN1Q8TCX5 695 aa20.3■□□□□ 0.84
PRKCD-201ENST00000330452 NFAT5O94916 1531 aa20.3■□□□□ 0.84
PRKCD-201ENST00000330452 CACNA1FO60840 1977 aa20.3■□□□□ 0.84
PRKCD-201ENST00000330452 POLA2Q14181 598 aa20.3■□□□□ 0.84
PRKCD-201ENST00000330452 STRCP1A6NGW2 1772 aa20.3■□□□□ 0.84
PRKCD-201ENST00000330452 SATB1Q01826 763 aa20.3■□□□□ 0.84
PRKCD-201ENST00000330452 GPATCH11Q8N954 259 aa20.3■□□□□ 0.84
PRKCD-201ENST00000330452 NFATC2IPQ8NCF5 419 aa20.29■□□□□ 0.84
PRKCD-201ENST00000330452 ST7Q9NRC1 585 aa20.29■□□□□ 0.84
PRKCD-201ENST00000330452 BEND3Q5T5X7 828 aa20.29■□□□□ 0.84
PRKCD-201ENST00000330452 DNAAF4Q8WXU2 420 aa20.29■□□□□ 0.84
PRKCD-201ENST00000330452 TOMM22Q9NS69 142 aa20.29■□□□□ 0.84
PRKCD-201ENST00000330452 NSFL1CQ9UNZ2 370 aaKnown RBP20.29■□□□□ 0.84
PRKCD-201ENST00000330452 CSB-PGBD3P0DP91 1061 aa20.28■□□□□ 0.84
PRKCD-201ENST00000330452 CASQ1P31415 396 aa20.28■□□□□ 0.84
PRKCD-201ENST00000330452 ANAPC15P60006 121 aa20.28■□□□□ 0.84
PRKCD-201ENST00000330452 RAB11FIP3O75154 756 aa20.28■□□□□ 0.84
PRKCD-201ENST00000330452 MCM2P49736 904 aa20.28■□□□□ 0.84
PRKCD-201ENST00000330452 CUL4AQ13619 759 aa20.28■□□□□ 0.84
PRKCD-201ENST00000330452 PI4K2BQ8TCG2 481 aa20.28■□□□□ 0.84
PRKCD-201ENST00000330452 BTBD11A6QL63 1104 aa20.27■□□□□ 0.84
PRKCD-201ENST00000330452 TEFQ10587 303 aa20.27■□□□□ 0.84
PRKCD-201ENST00000330452 ZNF446Q9NWS9 450 aa20.27■□□□□ 0.84
PRKCD-201ENST00000330452 PXDNQ92626 1479 aa20.27■□□□□ 0.84
PRKCD-201ENST00000330452 AOX1Q06278 1338 aa20.27■□□□□ 0.84
PRKCD-201ENST00000330452 NAA30Q147X3 362 aaPredicted RBP20.27■□□□□ 0.83
PRKCD-201ENST00000330452 KIAA1524Q8TCG1 905 aa20.26■□□□□ 0.83
PRKCD-201ENST00000330452 SLC39A6Q13433 755 aa20.26■□□□□ 0.83
PRKCD-201ENST00000330452 IRF6O14896 467 aa20.25■□□□□ 0.83
PRKCD-201ENST00000330452 TRIM66O15016 1216 aa20.25■□□□□ 0.83
PRKCD-201ENST00000330452 BRD1O95696 1058 aa20.25■□□□□ 0.83
PRKCD-201ENST00000330452 KIF1BPQ96EK5 621 aa20.25■□□□□ 0.83
PRKCD-201ENST00000330452 USP54Q70EL1 1684 aa20.25■□□□□ 0.83
PRKCD-201ENST00000330452 C10orf67Q8IYJ2 551 aa20.25■□□□□ 0.83
PRKCD-201ENST00000330452 PIP4K2AP48426 406 aaPredicted RBP20.24■□□□□ 0.83
PRKCD-201ENST00000330452 FOXD4L6Q3SYB3 417 aaPredicted RBP20.24■□□□□ 0.83
PRKCD-201ENST00000330452 FOXD4L3Q6VB84 417 aaPredicted RBP20.24■□□□□ 0.83
PRKCD-201ENST00000330452 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.24■□□□□ 0.83
PRKCD-201ENST00000330452 MST1RQ04912 1400 aa20.24■□□□□ 0.83
PRKCD-201ENST00000330452 HSPA4P34932 840 aa20.24■□□□□ 0.83
PRKCD-201ENST00000330452 NOL10Q9BSC4 688 aaKnown RBP20.24■□□□□ 0.83
PRKCD-201ENST00000330452 TSPY26PQ9H489 355 aa20.24■□□□□ 0.83
PRKCD-201ENST00000330452 ADCY9O60503 1353 aa20.24■□□□□ 0.83
PRKCD-201ENST00000330452 N4BP2Q86UW6 1770 aaPredicted RBP20.24■□□□□ 0.83
PRKCD-201ENST00000330452 NBPF20Q3BBV1 942 aa20.23■□□□□ 0.83
PRKCD-201ENST00000330452 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
PRKCD-201ENST00000330452 AKAP4Q5JQC9 854 aa20.23■□□□□ 0.83
PRKCD-201ENST00000330452 SYT10Q6XYQ8 523 aa20.23■□□□□ 0.83
PRKCD-201ENST00000330452 MYO1CO00159 1063 aa20.23■□□□□ 0.83
PRKCD-201ENST00000330452 MUM1L1Q5H9M0 696 aa20.23■□□□□ 0.83
PRKCD-201ENST00000330452 DONSONQ9NYP3 566 aa20.23■□□□□ 0.83
PRKCD-201ENST00000330452 RAD50Q92878 1312 aa20.23■□□□□ 0.83
PRKCD-201ENST00000330452 HOXB7P09629 217 aa20.22■□□□□ 0.83
PRKCD-201ENST00000330452 PROSER3Q2NL68 480 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms