RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 CENPHQ9H3R5 247 aa15.32■□□□□ 0.04
TRAK1-201ENST00000327628 MSH6P52701 1360 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 PRKCSHP14314 528 aaPredicted RBP15.31■□□□□ 0.04
TRAK1-201ENST00000327628 PLCG2P16885 1265 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 IFFO1Q0D2I5 559 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 BICDL1Q6ZP65 573 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 CLIP2Q9UDT6 1046 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 HDAC1Q13547 482 aaPredicted RBP15.31■□□□□ 0.04
TRAK1-201ENST00000327628 CCDC102BQ68D86 513 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 NUP88Q99567 741 aaPredicted RBP15.31■□□□□ 0.04
TRAK1-201ENST00000327628 NYXQ9GZU5 481 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 CCDC171Q6TFL3 1326 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 TSNARE1Q96NA8 513 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 ZFYVE9O95405 1425 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 MTIF2P46199 727 aaKnown RBP15.31■□□□□ 0.04
TRAK1-201ENST00000327628 UBE2HP62256 183 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 CCDC40Q4G0X9 1142 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 KCNG4Q8TDN1 519 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 RTL9Q8NET4 1388 aa15.31■□□□□ 0.04
TRAK1-201ENST00000327628 PPP1R2P41236 205 aa15.3■□□□□ 0.04
TRAK1-201ENST00000327628 MCM10Q7L590 875 aa15.3■□□□□ 0.04
TRAK1-201ENST00000327628 NEK1Q96PY6 1258 aa15.3■□□□□ 0.04
TRAK1-201ENST00000327628 TMEM67Q5HYA8 995 aa15.3■□□□□ 0.04
TRAK1-201ENST00000327628 TBCAO75347 108 aaKnown RBP15.3■□□□□ 0.04
TRAK1-201ENST00000327628 SPECC1LQ69YQ0 1117 aa15.3■□□□□ 0.04
TRAK1-201ENST00000327628 KRT28Q7Z3Y7 464 aa15.3■□□□□ 0.04
TRAK1-201ENST00000327628 GSTTP1A0A1W2PQM5 241 aa15.3■□□□□ 0.04
TRAK1-201ENST00000327628 METAP2P50579 478 aaKnown RBP eCLIP15.3■□□□□ 0.045e-7■■■■■ 29.1
TRAK1-201ENST00000327628 TBC1D5Q92609 795 aa15.3■□□□□ 0.04
TRAK1-201ENST00000327628 PAXBP1Q9Y5B6 917 aa15.3■□□□□ 0.04
TRAK1-201ENST00000327628 PABPN1LA6NDY0 278 aaKnown RBP15.3■□□□□ 0.04
TRAK1-201ENST00000327628 UBA7P41226 1012 aa15.3■□□□□ 0.04
TRAK1-201ENST00000327628 FSIP1Q8NA03 581 aa15.3■□□□□ 0.04
TRAK1-201ENST00000327628 CERS3Q8IU89 383 aa15.29■□□□□ 0.04
TRAK1-201ENST00000327628 DHX37Q8IY37 1157 aaKnown RBP15.29■□□□□ 0.04
TRAK1-201ENST00000327628 NOS1P29475 1434 aa15.29■□□□□ 0.04
TRAK1-201ENST00000327628 KDM5BQ9UGL1 1544 aa15.29■□□□□ 0.04
TRAK1-201ENST00000327628 ACTN2P35609 894 aa15.29■□□□□ 0.04
TRAK1-201ENST00000327628 CCDC174Q6PII3 467 aa15.29■□□□□ 0.04
TRAK1-201ENST00000327628 PIBF1Q8WXW3 757 aa15.29■□□□□ 0.04
TRAK1-201ENST00000327628 STMN4Q9H169 189 aaPredicted RBP15.29■□□□□ 0.04
TRAK1-201ENST00000327628 RAD50Q92878 1312 aa15.29■□□□□ 0.04
TRAK1-201ENST00000327628 SYCE3A1L190 88 aa15.29■□□□□ 0.04
TRAK1-201ENST00000327628 ESR2Q92731 530 aa15.29■□□□□ 0.04
TRAK1-201ENST00000327628 STX6O43752 255 aa15.28■□□□□ 0.04
TRAK1-201ENST00000327628 RBM25P49756 843 aaKnown RBP15.28■□□□□ 0.04
TRAK1-201ENST00000327628 TTC22Q5TAA0 569 aa15.28■□□□□ 0.04
TRAK1-201ENST00000327628 NPHP3Q7Z494 1330 aa15.28■□□□□ 0.04
TRAK1-201ENST00000327628 CTNNA2P26232 953 aa15.28■□□□□ 0.04
TRAK1-201ENST00000327628 ASXL1Q8IXJ9 1541 aa15.28■□□□□ 0.04
TRAK1-201ENST00000327628 TDRD12Q587J7 1177 aaKnown RBP15.28■□□□□ 0.04
TRAK1-201ENST00000327628 APBB1IPQ7Z5R6 666 aaPredicted RBP15.28■□□□□ 0.04
TRAK1-201ENST00000327628 USP16Q9Y5T5 823 aa15.28■□□□□ 0.04
TRAK1-201ENST00000327628 STK24Q9Y6E0 443 aa15.28■□□□□ 0.04
TRAK1-201ENST00000327628 PKNOX2Q96KN3 472 aa15.28■□□□□ 0.04
TRAK1-201ENST00000327628 FSD2A1L4K1 749 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 TSPY2A6NKD2 308 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 CYLC1P35663 651 aaPredicted RBP15.27■□□□□ 0.04
TRAK1-201ENST00000327628 C6orf163Q5TEZ5 329 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 ATL3Q6DD88 541 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 LDHAL6AQ6ZMR3 332 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 NME9Q86XW9 330 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 STK11IPQ8N1F8 1099 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 EXOC1Q9NV70 894 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 TTC41PQ6P2S7 1318 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 TUBBP07437 444 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 CALML3P27482 149 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 IL15P40933 162 aaPredicted RBP15.27■□□□□ 0.04
TRAK1-201ENST00000327628 LMBR1Q8WVP7 490 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 BABAM1Q9NWV8 329 aa15.27■□□□□ 0.04
TRAK1-201ENST00000327628 FAM177A1Q8N128 213 aaPredicted RBP15.27■□□□□ 0.03
TRAK1-201ENST00000327628 RASAL2Q9UJF2 1139 aa15.27■□□□□ 0.03
TRAK1-201ENST00000327628 MAP3K2Q9Y2U5 619 aa15.27■□□□□ 0.03
TRAK1-201ENST00000327628 SRRTQ9BXP5 876 aaKnown RBP15.27■□□□□ 0.03
TRAK1-201ENST00000327628 PPIP5K1Q6PFW1 1433 aa15.27■□□□□ 0.03
TRAK1-201ENST00000327628 FERP16591 822 aa15.26■□□□□ 0.03
TRAK1-201ENST00000327628 PRIMPOLQ96LW4 560 aa15.26■□□□□ 0.03
TRAK1-201ENST00000327628 CCDC175P0C221 793 aa15.26■□□□□ 0.03
TRAK1-201ENST00000327628 MSANTD4Q8NCY6 345 aa15.26■□□□□ 0.03
TRAK1-201ENST00000327628 DRC1Q96MC2 740 aa15.26■□□□□ 0.03
TRAK1-201ENST00000327628 UHRF1BP1LA0JNW5 1464 aa15.26■□□□□ 0.03
TRAK1-201ENST00000327628 PTCD1O75127 700 aaKnown RBP15.26■□□□□ 0.03
TRAK1-201ENST00000327628 FAM193AP78312 1265 aa15.26■□□□□ 0.03
TRAK1-201ENST00000327628 UBA5Q9GZZ9 404 aa15.26■□□□□ 0.03
TRAK1-201ENST00000327628 ORC3Q9UBD5 711 aaPredicted RBP15.26■□□□□ 0.03
TRAK1-201ENST00000327628 GRIPAP1Q4V328 841 aa15.25■□□□□ 0.03
TRAK1-201ENST00000327628 CALCOCO1Q9P1Z2 691 aa15.25■□□□□ 0.03
TRAK1-201ENST00000327628 TRPM2O94759 1503 aa15.25■□□□□ 0.03
TRAK1-201ENST00000327628 WTAPQ15007 396 aa15.25■□□□□ 0.03
TRAK1-201ENST00000327628 AKAP4Q5JQC9 854 aa15.25■□□□□ 0.03
TRAK1-201ENST00000327628 ZNF804AQ7Z570 1209 aa15.25■□□□□ 0.03
TRAK1-201ENST00000327628 KRT13P13646 458 aa15.25■□□□□ 0.03
TRAK1-201ENST00000327628 GJB2P29033 226 aa15.24■□□□□ 0.03
TRAK1-201ENST00000327628 SELENOOQ9BVL4 669 aa15.24■□□□□ 0.03
TRAK1-201ENST00000327628 TMEM87AQ8NBN3 555 aa15.24■□□□□ 0.03
TRAK1-201ENST00000327628 UTP14AQ9BVJ6 771 aaKnown RBP15.24■□□□□ 0.03
TRAK1-201ENST00000327628 CDCA7Q9BWT1 371 aaPredicted RBP15.24■□□□□ 0.03
TRAK1-201ENST00000327628 NSRP1Q9H0G5 558 aaKnown RBP15.24■□□□□ 0.03
TRAK1-201ENST00000327628 KLHL40Q2TBA0 621 aa15.24■□□□□ 0.03
TRAK1-201ENST00000327628 SYCP3Q8IZU3 236 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms