RNA–Protein interactions for RNA: ENST00000323081.12

SPNS1-202, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 2 BASIC

Gene SPNS1, Length 2,102 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-202ENST00000323081 NBPF14Q5TI25 921 aa21.29■■□□□ 1
SPNS1-202ENST00000323081 FOXD4L5Q5VV16 416 aaPredicted RBP21.29■■□□□ 1
SPNS1-202ENST00000323081 NBPF10Q6P3W6 841 aaKnown RBP21.29■■□□□ 1
SPNS1-202ENST00000323081 NBPF15Q8N660 670 aa21.29■■□□□ 1
SPNS1-202ENST00000323081 FOXD4L4Q8WXT5 416 aaPredicted RBP21.29■■□□□ 1
SPNS1-202ENST00000323081 STRN4Q9NRL3 753 aa21.29■■□□□ 1
SPNS1-202ENST00000323081 RASEFQ8IZ41 740 aa21.28■■□□□ 1
SPNS1-202ENST00000323081 JARID2Q92833 1246 aaPredicted RBP21.28■■□□□ 1
SPNS1-202ENST00000323081 PRPF40AO75400 957 aaKnown RBP21.27■■□□□ 1
SPNS1-202ENST00000323081 NCLP19338 710 aaKnown RBP21.27■■□□□ 1
SPNS1-202ENST00000323081 ATP5J2-PTCD1G3V325 749 aa21.26■□□□□ 0.99
SPNS1-202ENST00000323081 PTCD1O75127 700 aaKnown RBP21.26■□□□□ 0.99
SPNS1-202ENST00000323081 PLBD2Q8NHP8 589 aa21.26■□□□□ 0.99
SPNS1-202ENST00000323081 DDX54Q8TDD1 881 aaKnown RBP21.26■□□□□ 0.99
SPNS1-202ENST00000323081 TLR7Q9NYK1 1049 aaKnown RBP21.26■□□□□ 0.99
SPNS1-202ENST00000323081 BRD1O95696 1058 aa21.26■□□□□ 0.99
SPNS1-202ENST00000323081 CHAMP1Q96JM3 812 aa21.26■□□□□ 0.99
SPNS1-202ENST00000323081 TOGARAM1Q9Y4F4 1720 aa21.26■□□□□ 0.99
SPNS1-202ENST00000323081 ERBB4Q15303 1308 aa21.25■□□□□ 0.99
SPNS1-202ENST00000323081 PTH1RQ03431 593 aa21.25■□□□□ 0.99
SPNS1-202ENST00000323081 UBE3BQ7Z3V4 1068 aa21.25■□□□□ 0.99
SPNS1-202ENST00000323081 NUP188Q5SRE5 1749 aa21.25■□□□□ 0.99
SPNS1-202ENST00000323081 COL15A1P39059 1388 aa21.24■□□□□ 0.99
SPNS1-202ENST00000323081 RFX5P48382 616 aaPredicted RBP21.24■□□□□ 0.99
SPNS1-202ENST00000323081 TTC14Q96N46 770 aa21.24■□□□□ 0.99
SPNS1-202ENST00000323081 CASP7P55210 303 aa21.23■□□□□ 0.99
SPNS1-202ENST00000323081 EVA1CP58658 441 aa21.23■□□□□ 0.99
SPNS1-202ENST00000323081 RABL6Q3YEC7 729 aaPredicted RBP21.23■□□□□ 0.99
SPNS1-202ENST00000323081 CAVIN1Q6NZI2 390 aaKnown RBP21.23■□□□□ 0.99
SPNS1-202ENST00000323081 BOLA2Q9H3K6 86 aa21.23■□□□□ 0.99
SPNS1-202ENST00000323081 TNS2Q63HR2 1409 aa21.23■□□□□ 0.99
SPNS1-202ENST00000323081 A0A087WZG4 1122 aa21.23■□□□□ 0.99
SPNS1-202ENST00000323081 COPRSQ9NQ92 184 aa21.23■□□□□ 0.99
SPNS1-202ENST00000323081 AK2P54819 239 aa21.22■□□□□ 0.99
SPNS1-202ENST00000323081 PRPF40BQ6NWY9 871 aaKnown RBP21.22■□□□□ 0.99
SPNS1-202ENST00000323081 TTLL7Q6ZT98 887 aa21.22■□□□□ 0.99
SPNS1-202ENST00000323081 HIP1O00291 1037 aa21.22■□□□□ 0.99
SPNS1-202ENST00000323081 A1BGP04217 495 aa21.22■□□□□ 0.99
SPNS1-202ENST00000323081 CASTP20810 708 aaKnown RBP21.22■□□□□ 0.99
SPNS1-202ENST00000323081 PTPN12Q05209 780 aaKnown RBP21.22■□□□□ 0.99
SPNS1-202ENST00000323081 CLCN1P35523 988 aa21.21■□□□□ 0.99
SPNS1-202ENST00000323081 FAM227BQ96M60 508 aa21.21■□□□□ 0.99
SPNS1-202ENST00000323081 NMIQ13287 307 aaPredicted RBP21.2■□□□□ 0.98
SPNS1-202ENST00000323081 GPT2Q8TD30 523 aa21.2■□□□□ 0.98
SPNS1-202ENST00000323081 LARP6Q9BRS8 491 aaKnown RBP21.2■□□□□ 0.98
SPNS1-202ENST00000323081 TJP1Q07157 1748 aa21.2■□□□□ 0.98
SPNS1-202ENST00000323081 CPA1P15085 419 aa21.2■□□□□ 0.98
SPNS1-202ENST00000323081 RUFY3Q7L099 469 aa21.2■□□□□ 0.98
SPNS1-202ENST00000323081 LIMCH1Q9UPQ0 1083 aa21.2■□□□□ 0.98
SPNS1-202ENST00000323081 CCDC171Q6TFL3 1326 aa21.19■□□□□ 0.98
SPNS1-202ENST00000323081 ZSCAN23Q3MJ62 389 aa21.19■□□□□ 0.98
SPNS1-202ENST00000323081 FSD1Q9BTV5 496 aa21.19■□□□□ 0.98
SPNS1-202ENST00000323081 JAKMIP1Q96N16 626 aaKnown RBP21.19■□□□□ 0.98
SPNS1-202ENST00000323081 ZNF445P59923 1031 aa21.18■□□□□ 0.98
SPNS1-202ENST00000323081 NECTIN1Q15223 517 aa21.18■□□□□ 0.98
SPNS1-202ENST00000323081 ADCK5Q3MIX3 580 aa21.18■□□□□ 0.98
SPNS1-202ENST00000323081 KCNB2Q92953 911 aa21.18■□□□□ 0.98
SPNS1-202ENST00000323081 H7C1W4 665 aa21.17■□□□□ 0.98
SPNS1-202ENST00000323081 TFCP2Q12800 502 aa21.17■□□□□ 0.98
SPNS1-202ENST00000323081 ZKSCAN1P17029 563 aaPredicted RBP21.17■□□□□ 0.98
SPNS1-202ENST00000323081 KCNJ4P48050 445 aa21.17■□□□□ 0.98
SPNS1-202ENST00000323081 TNNI3KQ59H18 835 aa21.17■□□□□ 0.98
SPNS1-202ENST00000323081 PDRG1Q9NUG6 133 aa21.17■□□□□ 0.98
SPNS1-202ENST00000323081 BTG4Q9NY30 223 aa21.17■□□□□ 0.98
SPNS1-202ENST00000323081 RBM8AQ9Y5S9 174 aaKnown RBP21.17■□□□□ 0.98
SPNS1-202ENST00000323081 FPGT-TNNI3KV9GXZ4 949 aa21.17■□□□□ 0.98
SPNS1-202ENST00000323081 WDR33Q9C0J8 1336 aaKnown RBP21.17■□□□□ 0.98
SPNS1-202ENST00000323081 A0A0D9SFI3 127 aa21.16■□□□□ 0.98
SPNS1-202ENST00000323081 FOXO4P98177 505 aa21.16■□□□□ 0.98
SPNS1-202ENST00000323081 MAP4K1Q92918 833 aa21.16■□□□□ 0.98
SPNS1-202ENST00000323081 CYP46A1Q9Y6A2 500 aa21.16■□□□□ 0.98
SPNS1-202ENST00000323081 VPS53Q5VIR6 699 aa21.16■□□□□ 0.98
SPNS1-202ENST00000323081 LMBR1LQ6UX01 489 aa21.16■□□□□ 0.98
SPNS1-202ENST00000323081 TM6SF1Q9BZW5 370 aa21.16■□□□□ 0.98
SPNS1-202ENST00000323081 ZBTB3Q9H5J0 574 aa21.16■□□□□ 0.98
SPNS1-202ENST00000323081 ZSWIM6Q9HCJ5 1215 aa21.16■□□□□ 0.98
SPNS1-202ENST00000323081 RBM27Q9P2N5 1060 aaKnown RBP21.16■□□□□ 0.98
SPNS1-202ENST00000323081 DBNLQ9UJU6 430 aaKnown RBP21.16■□□□□ 0.98
SPNS1-202ENST00000323081 CREB3L3Q68CJ9 461 aa21.15■□□□□ 0.98
SPNS1-202ENST00000323081 SNRKQ9NRH2 765 aa21.15■□□□□ 0.98
SPNS1-202ENST00000323081 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
SPNS1-202ENST00000323081 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.15■□□□□ 0.98
SPNS1-202ENST00000323081 FOXD4L6Q3SYB3 417 aaPredicted RBP21.14■□□□□ 0.98
SPNS1-202ENST00000323081 FOXD4L3Q6VB84 417 aaPredicted RBP21.14■□□□□ 0.98
SPNS1-202ENST00000323081 CWC25Q9NXE8 425 aaPredicted RBP21.14■□□□□ 0.98
SPNS1-202ENST00000323081 ATP5JP18859 108 aa21.14■□□□□ 0.97
SPNS1-202ENST00000323081 NASPP49321 788 aaPredicted RBP21.14■□□□□ 0.97
SPNS1-202ENST00000323081 EDC3Q96F86 508 aaKnown RBP21.14■□□□□ 0.97
SPNS1-202ENST00000323081 NSFL1CQ9UNZ2 370 aaKnown RBP21.14■□□□□ 0.97
SPNS1-202ENST00000323081 ITGB4P16144 1822 aa21.14■□□□□ 0.97
SPNS1-202ENST00000323081 CHMP3Q9Y3E7 222 aa21.13■□□□□ 0.97
SPNS1-202ENST00000323081 RPAP1Q9BWH6 1393 aaPredicted RBP21.13■□□□□ 0.97
SPNS1-202ENST00000323081 LARGE1O95461 756 aa21.13■□□□□ 0.97
SPNS1-202ENST00000323081 MBD3O95983 291 aa21.13■□□□□ 0.97
SPNS1-202ENST00000323081 TRIM44Q96DX7 344 aaPredicted RBP21.13■□□□□ 0.97
SPNS1-202ENST00000323081 SLC27A2O14975 620 aa21.12■□□□□ 0.97
SPNS1-202ENST00000323081 PIGBQ92521 554 aa21.12■□□□□ 0.97
SPNS1-202ENST00000323081 TMEM63CQ9P1W3 806 aa21.12■□□□□ 0.97
SPNS1-202ENST00000323081 ASAP1Q9ULH1 1129 aa21.12■□□□□ 0.97
SPNS1-202ENST00000323081 SMC3Q9UQE7 1217 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms