RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 PA2G4Q9UQ80 394 aaKnown RBP21.9■■□□□ 1.1
RAB39A-201ENST00000320578 KAT6BQ8WYB5 2073 aa21.89■■□□□ 1.09
RAB39A-201ENST00000320578 PTPN12Q05209 780 aaKnown RBP21.89■■□□□ 1.09
RAB39A-201ENST00000320578 KCNQ2O43526 872 aa21.88■■□□□ 1.09
RAB39A-201ENST00000320578 SASH1O94885 1247 aa21.88■■□□□ 1.09
RAB39A-201ENST00000320578 ZBTB38Q8NAP3 1195 aaPredicted RBP21.88■■□□□ 1.09
RAB39A-201ENST00000320578 CDHR2Q9BYE9 1310 aa21.88■■□□□ 1.09
RAB39A-201ENST00000320578 CRKLP46109 303 aaKnown RBP21.87■■□□□ 1.09
RAB39A-201ENST00000320578 ZNF330Q9Y3S2 320 aaPredicted RBP21.87■■□□□ 1.09
RAB39A-201ENST00000320578 ITPK1Q13572 414 aa21.87■■□□□ 1.09
RAB39A-201ENST00000320578 LMBR1LQ6UX01 489 aa21.87■■□□□ 1.09
RAB39A-201ENST00000320578 DZIP3Q86Y13 1208 aaKnown RBP21.87■■□□□ 1.09
RAB39A-201ENST00000320578 NUTM1Q86Y26 1132 aa21.87■■□□□ 1.09
RAB39A-201ENST00000320578 PI4K2BQ8TCG2 481 aa21.87■■□□□ 1.09
RAB39A-201ENST00000320578 GPATCH3Q96I76 525 aa21.87■■□□□ 1.09
RAB39A-201ENST00000320578 ERC2O15083 957 aa21.86■■□□□ 1.09
RAB39A-201ENST00000320578 RGL2O15211 777 aa21.86■■□□□ 1.09
RAB39A-201ENST00000320578 TUBGCP6Q96RT7 1819 aa21.86■■□□□ 1.09
RAB39A-201ENST00000320578 GLRX3O76003 335 aaKnown RBP21.85■■□□□ 1.09
RAB39A-201ENST00000320578 NLRP10Q86W26 655 aa21.85■■□□□ 1.09
RAB39A-201ENST00000320578 JARID2Q92833 1246 aaPredicted RBP21.85■■□□□ 1.09
RAB39A-201ENST00000320578 BCL11AQ9H165 835 aa21.85■■□□□ 1.09
RAB39A-201ENST00000320578 IFIT2P09913 472 aaKnown RBP21.85■■□□□ 1.09
RAB39A-201ENST00000320578 HLFQ16534 295 aa21.85■■□□□ 1.09
RAB39A-201ENST00000320578 ECHDC1Q9NTX5 307 aa21.85■■□□□ 1.09
RAB39A-201ENST00000320578 FBXO3Q9UK99 471 aa21.85■■□□□ 1.09
RAB39A-201ENST00000320578 A0A0G2JS52 829 aa21.84■■□□□ 1.09
RAB39A-201ENST00000320578 MYT1Q01538 1121 aa21.84■■□□□ 1.09
RAB39A-201ENST00000320578 BECN1Q14457 450 aa21.84■■□□□ 1.09
RAB39A-201ENST00000320578 ZNF34Q8IZ26 560 aa21.84■■□□□ 1.09
RAB39A-201ENST00000320578 NHSQ6T4R5 1651 aa21.83■■□□□ 1.09
RAB39A-201ENST00000320578 CSF1RP07333 972 aa21.83■■□□□ 1.08
RAB39A-201ENST00000320578 ERICH6Q7L0X2 663 aa21.83■■□□□ 1.08
RAB39A-201ENST00000320578 DAXXQ9UER7 740 aaPredicted RBP21.83■■□□□ 1.08
RAB39A-201ENST00000320578 CNTNAP4Q9C0A0 1308 aa21.82■■□□□ 1.08
RAB39A-201ENST00000320578 ANKRD36CQ5JPF3 1778 aa21.82■■□□□ 1.08
RAB39A-201ENST00000320578 CIAO1O76071 339 aa21.82■■□□□ 1.08
RAB39A-201ENST00000320578 REC8O95072 547 aa21.82■■□□□ 1.08
RAB39A-201ENST00000320578 TSHZ3Q63HK5 1081 aa21.82■■□□□ 1.08
RAB39A-201ENST00000320578 AACSQ86V21 672 aa21.82■■□□□ 1.08
RAB39A-201ENST00000320578 AK7Q96M32 723 aa21.82■■□□□ 1.08
RAB39A-201ENST00000320578 COL5A3P25940 1745 aaPredicted RBP21.81■■□□□ 1.08
RAB39A-201ENST00000320578 EPB41L2O43491 1005 aaKnown RBP21.81■■□□□ 1.08
RAB39A-201ENST00000320578 RC3H1Q5TC82 1133 aaKnown RBP21.81■■□□□ 1.08
RAB39A-201ENST00000320578 EAF2Q96CJ1 260 aaPredicted RBP21.81■■□□□ 1.08
RAB39A-201ENST00000320578 GPR108Q9NPR9 543 aa21.81■■□□□ 1.08
RAB39A-201ENST00000320578 ARXQ96QS3 562 aa21.8■■□□□ 1.08
RAB39A-201ENST00000320578 SIL1Q9H173 461 aa21.8■■□□□ 1.08
RAB39A-201ENST00000320578 TBC1D2BQ9UPU7 963 aa21.8■■□□□ 1.08
RAB39A-201ENST00000320578 TRIM6-TRIM34B2RNG4 842 aa21.8■■□□□ 1.08
RAB39A-201ENST00000320578 CHMLP26374 656 aa21.8■■□□□ 1.08
RAB39A-201ENST00000320578 IL15P40933 162 aaPredicted RBP21.8■■□□□ 1.08
RAB39A-201ENST00000320578 CNTROBQ8N137 903 aa21.8■■□□□ 1.08
RAB39A-201ENST00000320578 KLHDC4Q8TBB5 520 aa21.8■■□□□ 1.08
RAB39A-201ENST00000320578 CAMTA2O94983 1202 aa21.79■■□□□ 1.08
RAB39A-201ENST00000320578 PARP10Q53GL7 1025 aa21.79■■□□□ 1.08
RAB39A-201ENST00000320578 USP26Q9BXU7 913 aa21.79■■□□□ 1.08
RAB39A-201ENST00000320578 CLEC4GQ6UXB4 293 aa21.78■■□□□ 1.08
RAB39A-201ENST00000320578 SEPT12Q8IYM1 358 aa21.78■■□□□ 1.08
RAB39A-201ENST00000320578 NUP98P52948 1817 aa21.78■■□□□ 1.08
RAB39A-201ENST00000320578 RILPL2Q969X0 211 aa21.78■■□□□ 1.08
RAB39A-201ENST00000320578 FAM89AQ96GI7 184 aa21.78■■□□□ 1.08
RAB39A-201ENST00000320578 QTRT2Q9H974 415 aaKnown RBP21.78■■□□□ 1.08
RAB39A-201ENST00000320578 EYA2O00167 538 aa21.77■■□□□ 1.08
RAB39A-201ENST00000320578 TNNI3KQ59H18 835 aa21.77■■□□□ 1.08
RAB39A-201ENST00000320578 ATG9AQ7Z3C6 839 aa21.77■■□□□ 1.08
RAB39A-201ENST00000320578 LINC00116Q8NCU8 138 aa21.77■■□□□ 1.08
RAB39A-201ENST00000320578 ESYT1Q9BSJ8 1104 aa21.77■■□□□ 1.08
RAB39A-201ENST00000320578 FPGT-TNNI3KV9GXZ4 949 aa21.77■■□□□ 1.08
RAB39A-201ENST00000320578 CCDC57Q2TAC2 916 aa21.76■■□□□ 1.07
RAB39A-201ENST00000320578 CHMP3Q9Y3E7 222 aa21.76■■□□□ 1.07
RAB39A-201ENST00000320578 MYH14Q7Z406 1995 aaKnown RBP21.76■■□□□ 1.07
RAB39A-201ENST00000320578 HSP90B1P14625 803 aaKnown RBP21.76■■□□□ 1.07
RAB39A-201ENST00000320578 GPTP24298 496 aa21.76■■□□□ 1.07
RAB39A-201ENST00000320578 TFCP2Q12800 502 aa21.76■■□□□ 1.07
RAB39A-201ENST00000320578 RTL5Q5HYW3 569 aaPredicted RBP21.76■■□□□ 1.07
RAB39A-201ENST00000320578 SNX21Q969T3 373 aa21.76■■□□□ 1.07
RAB39A-201ENST00000320578 TRMT112Q9UI30 125 aaKnown RBP21.76■■□□□ 1.07
RAB39A-201ENST00000320578 ZNF652Q9Y2D9 606 aa21.76■■□□□ 1.07
RAB39A-201ENST00000320578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.76■■□□□ 1.07
RAB39A-201ENST00000320578 BTAF1O14981 1849 aa21.75■■□□□ 1.07
RAB39A-201ENST00000320578 EVI5LQ96CN4 794 aa21.75■■□□□ 1.07
RAB39A-201ENST00000320578 UBN2Q6ZU65 1347 aa21.75■■□□□ 1.07
RAB39A-201ENST00000320578 IRS4O14654 1257 aaPredicted RBP21.74■■□□□ 1.07
RAB39A-201ENST00000320578 PDE8AO60658 829 aa21.74■■□□□ 1.07
RAB39A-201ENST00000320578 KIF2CQ99661 725 aa21.74■■□□□ 1.07
RAB39A-201ENST00000320578 CCDC8Q9H0W5 538 aaPredicted RBP21.74■■□□□ 1.07
RAB39A-201ENST00000320578 ATP5JP18859 108 aa21.73■■□□□ 1.07
RAB39A-201ENST00000320578 CTSWP56202 376 aa21.73■■□□□ 1.07
RAB39A-201ENST00000320578 IFIT5Q13325 482 aaKnown RBP21.73■■□□□ 1.07
RAB39A-201ENST00000320578 TTLL11Q8NHH1 800 aa21.73■■□□□ 1.07
RAB39A-201ENST00000320578 BCL11BQ9C0K0 894 aaPredicted RBP21.73■■□□□ 1.07
RAB39A-201ENST00000320578 RPS6KA4O75676 772 aa21.72■■□□□ 1.07
RAB39A-201ENST00000320578 PTF1AQ7RTS3 328 aa21.72■■□□□ 1.07
RAB39A-201ENST00000320578 TICAM2Q86XR7 235 aa21.72■■□□□ 1.07
RAB39A-201ENST00000320578 UTP14AQ9BVJ6 771 aaKnown RBP21.72■■□□□ 1.07
RAB39A-201ENST00000320578 SH3TC1Q8TE82 1336 aa21.71■■□□□ 1.07
RAB39A-201ENST00000320578 TBC1D2Q9BYX2 928 aa21.71■■□□□ 1.07
RAB39A-201ENST00000320578 HIP1O00291 1037 aa21.71■■□□□ 1.07
RAB39A-201ENST00000320578 IL27Q8NEV9 243 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms