RNA–Protein interactions for RNA: ENST00000320031.12

ITGA3-202, Transcript of integrin subunit alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGA3, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-202ENST00000320031 TRMT2AQ8IZ69 625 aaKnown RBP19.34■□□□□ 0.69
ITGA3-202ENST00000320031 TRPM1Q7Z4N2 1603 aa19.33■□□□□ 0.69
ITGA3-202ENST00000320031 ATP2B3Q16720 1220 aa19.33■□□□□ 0.69
ITGA3-202ENST00000320031 PA2G4Q9UQ80 394 aaKnown RBP19.33■□□□□ 0.69
ITGA3-202ENST00000320031 USP5P45974 858 aa19.33■□□□□ 0.69
ITGA3-202ENST00000320031 DDX46Q7L014 1031 aaKnown RBP19.33■□□□□ 0.69
ITGA3-202ENST00000320031 CEP57L1Q8IYX8 460 aa19.33■□□□□ 0.69
ITGA3-202ENST00000320031 C8orf76Q96K31 380 aa19.33■□□□□ 0.69
ITGA3-202ENST00000320031 PLEKHF1Q96S99 279 aa19.33■□□□□ 0.69
ITGA3-202ENST00000320031 ATP6V1AP38606 617 aa19.33■□□□□ 0.68
ITGA3-202ENST00000320031 RPGRQ92834 1020 aaKnown RBP19.33■□□□□ 0.68
ITGA3-202ENST00000320031 A0A0U1RQG5 324 aaPredicted RBP19.32■□□□□ 0.68
ITGA3-202ENST00000320031 IQCA1Q86XH1 822 aa19.32■□□□□ 0.68
ITGA3-202ENST00000320031 TMX3Q96JJ7 454 aa19.32■□□□□ 0.68
ITGA3-202ENST00000320031 CEP131Q9UPN4 1083 aa19.32■□□□□ 0.68
ITGA3-202ENST00000320031 AK7Q96M32 723 aa19.32■□□□□ 0.68
ITGA3-202ENST00000320031 LGR6Q9HBX8 967 aa19.32■□□□□ 0.68
ITGA3-202ENST00000320031 TSPOAP1O95153 1857 aa19.32■□□□□ 0.68
ITGA3-202ENST00000320031 STX6O43752 255 aa19.32■□□□□ 0.68
ITGA3-202ENST00000320031 RBM5P52756 815 aaKnown RBP eCLIP19.32■□□□□ 0.68
ITGA3-202ENST00000320031 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
ITGA3-202ENST00000320031 PDILTQ8N807 584 aa19.31■□□□□ 0.68
ITGA3-202ENST00000320031 ZMYND15Q9H091 742 aa19.31■□□□□ 0.68
ITGA3-202ENST00000320031 ABCA9Q8IUA7 1624 aa19.31■□□□□ 0.68
ITGA3-202ENST00000320031 SYCE3A1L190 88 aa19.31■□□□□ 0.68
ITGA3-202ENST00000320031 SLC12A7Q9Y666 1083 aa19.31■□□□□ 0.68
ITGA3-202ENST00000320031 CCDC183Q5T5S1 534 aa19.31■□□□□ 0.68
ITGA3-202ENST00000320031 SLC52A2Q9HAB3 445 aa19.31■□□□□ 0.68
ITGA3-202ENST00000320031 ROBO2Q9HCK4 1378 aa19.3■□□□□ 0.68
ITGA3-202ENST00000320031 GOLGA8BA8MQT2 603 aa19.3■□□□□ 0.68
ITGA3-202ENST00000320031 GJB2P29033 226 aa19.3■□□□□ 0.68
ITGA3-202ENST00000320031 MCMDC2Q4G0Z9 681 aa19.3■□□□□ 0.68
ITGA3-202ENST00000320031 RBM8AQ9Y5S9 174 aaKnown RBP19.3■□□□□ 0.68
ITGA3-202ENST00000320031 ZNF521Q96K83 1311 aa19.3■□□□□ 0.68
ITGA3-202ENST00000320031 RNF17Q9BXT8 1623 aaKnown RBP19.3■□□□□ 0.68
ITGA3-202ENST00000320031 UBAP1LF5GYI3 381 aa19.3■□□□□ 0.68
ITGA3-202ENST00000320031 BAG4O95429 457 aaKnown RBP19.3■□□□□ 0.68
ITGA3-202ENST00000320031 SLF2Q8IX21 1173 aa19.3■□□□□ 0.68
ITGA3-202ENST00000320031 CDCA7Q9BWT1 371 aaPredicted RBP19.3■□□□□ 0.68
ITGA3-202ENST00000320031 IFIT3O14879 490 aaKnown RBP19.29■□□□□ 0.68
ITGA3-202ENST00000320031 NCOA7Q8NI08 942 aa19.29■□□□□ 0.68
ITGA3-202ENST00000320031 MKNK2Q9HBH9 465 aa19.29■□□□□ 0.68
ITGA3-202ENST00000320031 PODXL2Q9NZ53 605 aa19.29■□□□□ 0.68
ITGA3-202ENST00000320031 USP19O94966 1318 aa19.29■□□□□ 0.68
ITGA3-202ENST00000320031 SPHKAPQ2M3C7 1700 aa19.29■□□□□ 0.68
ITGA3-202ENST00000320031 CTCFLQ8NI51 663 aaPredicted RBP19.29■□□□□ 0.68
ITGA3-202ENST00000320031 POLR3DP05423 398 aaPredicted RBP19.29■□□□□ 0.68
ITGA3-202ENST00000320031 PLBD2Q8NHP8 589 aa19.29■□□□□ 0.68
ITGA3-202ENST00000320031 ZSCAN30Q86W11 494 aa19.29■□□□□ 0.68
ITGA3-202ENST00000320031 DZIP3Q86Y13 1208 aaKnown RBP19.29■□□□□ 0.68
ITGA3-202ENST00000320031 METTL22Q9BUU2 404 aaPredicted RBP19.29■□□□□ 0.68
ITGA3-202ENST00000320031 CCP110O43303 1012 aa19.28■□□□□ 0.68
ITGA3-202ENST00000320031 ZSCAN29Q8IWY8 852 aaPredicted RBP19.28■□□□□ 0.68
ITGA3-202ENST00000320031 MAGEC2Q9UBF1 373 aaPredicted RBP19.28■□□□□ 0.68
ITGA3-202ENST00000320031 BICC1Q9H694 974 aaKnown RBP19.28■□□□□ 0.68
ITGA3-202ENST00000320031 BTG4Q9NY30 223 aa19.28■□□□□ 0.68
ITGA3-202ENST00000320031 ABCC4O15439 1325 aa19.28■□□□□ 0.68
ITGA3-202ENST00000320031 SERPINC1P01008 464 aa19.28■□□□□ 0.68
ITGA3-202ENST00000320031 RFC4P35249 363 aa19.28■□□□□ 0.68
ITGA3-202ENST00000320031 EIF4A1P60842 406 aaKnown RBP19.28■□□□□ 0.68
ITGA3-202ENST00000320031 STIM1Q13586 685 aa19.28■□□□□ 0.68
ITGA3-202ENST00000320031 ACSBG1Q96GR2 724 aa19.28■□□□□ 0.68
ITGA3-202ENST00000320031 USP6P35125 1406 aa19.28■□□□□ 0.68
ITGA3-202ENST00000320031 LDHCP07864 332 aa19.28■□□□□ 0.68
ITGA3-202ENST00000320031 NBPF5PQ86XG9 351 aaPredicted RBP19.28■□□□□ 0.68
ITGA3-202ENST00000320031 RAD50Q92878 1312 aa19.27■□□□□ 0.68
ITGA3-202ENST00000320031 CHMLP26374 656 aa19.27■□□□□ 0.68
ITGA3-202ENST00000320031 GOLGA8AA7E2F4 631 aa19.27■□□□□ 0.68
ITGA3-202ENST00000320031 ANKRD18AQ8IVF6 992 aa19.27■□□□□ 0.68
ITGA3-202ENST00000320031 LARP6Q9BRS8 491 aaKnown RBP19.27■□□□□ 0.68
ITGA3-202ENST00000320031 RANBP6O60518 1105 aaKnown RBP19.27■□□□□ 0.67
ITGA3-202ENST00000320031 UTP14AQ9BVJ6 771 aaKnown RBP19.27■□□□□ 0.67
ITGA3-202ENST00000320031 AOX1Q06278 1338 aa19.27■□□□□ 0.67
ITGA3-202ENST00000320031 SPTY2D1Q68D10 685 aaPredicted RBP19.26■□□□□ 0.67
ITGA3-202ENST00000320031 SMARCE1Q969G3 411 aa19.26■□□□□ 0.67
ITGA3-202ENST00000320031 PDCL3Q9H2J4 239 aa19.26■□□□□ 0.67
ITGA3-202ENST00000320031 RTL1A6NKG5 1358 aa19.26■□□□□ 0.67
ITGA3-202ENST00000320031 EPS15P42566 896 aa19.26■□□□□ 0.67
ITGA3-202ENST00000320031 CCAR1Q8IX12 1150 aaKnown RBP19.26■□□□□ 0.67
ITGA3-202ENST00000320031 TMOD2Q9NZR1 351 aa19.26■□□□□ 0.67
ITGA3-202ENST00000320031 SPC24Q8NBT2 197 aa19.26■□□□□ 0.67
ITGA3-202ENST00000320031 MCM5P33992 734 aa19.26■□□□□ 0.67
ITGA3-202ENST00000320031 CLCN1P35523 988 aa19.26■□□□□ 0.67
ITGA3-202ENST00000320031 CCT2P78371 535 aaKnown RBP19.26■□□□□ 0.67
ITGA3-202ENST00000320031 PAG1Q9NWQ8 432 aa19.26■□□□□ 0.67
ITGA3-202ENST00000320031 CBFA2T2O43439 604 aa19.25■□□□□ 0.67
ITGA3-202ENST00000320031 GPS2Q13227 327 aa19.25■□□□□ 0.67
ITGA3-202ENST00000320031 SLAIN2Q9P270 581 aa19.25■□□□□ 0.67
ITGA3-202ENST00000320031 MNS1Q8NEH6 495 aa19.25■□□□□ 0.67
ITGA3-202ENST00000320031 NIP7Q9Y221 180 aaKnown RBP eCLIP19.25■□□□□ 0.67
ITGA3-202ENST00000320031 USP16Q9Y5T5 823 aa19.25■□□□□ 0.67
ITGA3-202ENST00000320031 NMIQ13287 307 aaPredicted RBP19.25■□□□□ 0.67
ITGA3-202ENST00000320031 KLHL40Q2TBA0 621 aa19.25■□□□□ 0.67
ITGA3-202ENST00000320031 UQCRHLA0A096LP55 91 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 SMTNL1A8MU46 457 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 SEC24BO95487 1268 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 UQCRHP07919 91 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 HAND2P61296 217 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 SSRP1Q08945 709 aaKnown RBP19.24■□□□□ 0.67
ITGA3-202ENST00000320031 ZNF444Q8N0Y2 327 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms