RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 TLR7Q9NYK1 1049 aaKnown RBP9.2□□□□□ -0.94
IFT88-201ENST00000319980 ASAP1Q9ULH1 1129 aa9.2□□□□□ -0.94
IFT88-201ENST00000319980 RAB3GAP1Q15042 981 aa9.19□□□□□ -0.94
IFT88-201ENST00000319980 ANAPC15P60006 121 aa9.19□□□□□ -0.94
IFT88-201ENST00000319980 PTPN12Q05209 780 aaKnown RBP9.19□□□□□ -0.94
IFT88-201ENST00000319980 KIAA1211Q6ZU35 1233 aa9.19□□□□□ -0.94
IFT88-201ENST00000319980 PIGBQ92521 554 aa9.19□□□□□ -0.94
IFT88-201ENST00000319980 UPF3BQ9BZI7 483 aaKnown RBP9.19□□□□□ -0.94
IFT88-201ENST00000319980 DIAPH3Q9NSV4 1193 aa9.19□□□□□ -0.94
IFT88-201ENST00000319980 CHMP3Q9Y3E7 222 aa9.19□□□□□ -0.94
IFT88-201ENST00000319980 LMBR1LQ6UX01 489 aa9.18□□□□□ -0.94
IFT88-201ENST00000319980 BOLA2Q9H3K6 86 aa9.18□□□□□ -0.94
IFT88-201ENST00000319980 COPRSQ9NQ92 184 aa9.18□□□□□ -0.94
IFT88-201ENST00000319980 RABL6Q3YEC7 729 aaPredicted RBP9.18□□□□□ -0.94
IFT88-201ENST00000319980 CWC25Q9NXE8 425 aaPredicted RBP9.18□□□□□ -0.94
IFT88-201ENST00000319980 SLIT2O94813 1529 aa9.18□□□□□ -0.94
IFT88-201ENST00000319980 HSPA4P34932 840 aa9.18□□□□□ -0.94
IFT88-201ENST00000319980 RFX5P48382 616 aaPredicted RBP9.18□□□□□ -0.94
IFT88-201ENST00000319980 CASP7P55210 303 aa9.18□□□□□ -0.94
IFT88-201ENST00000319980 NOL8Q76FK4 1167 aaKnown RBP9.18□□□□□ -0.94
IFT88-201ENST00000319980 ZGPATQ8N5A5 531 aaKnown RBP9.18□□□□□ -0.94
IFT88-201ENST00000319980 SYTL4Q96C24 671 aaPredicted RBP9.18□□□□□ -0.94
IFT88-201ENST00000319980 EVI5LQ96CN4 794 aa9.18□□□□□ -0.94
IFT88-201ENST00000319980 PARP4Q9UKK3 1724 aaKnown RBP9.17□□□□□ -0.94
IFT88-201ENST00000319980 H7C1W4 665 aa9.17□□□□□ -0.94
IFT88-201ENST00000319980 SSFA2P28290 1259 aa9.17□□□□□ -0.94
IFT88-201ENST00000319980 TFCP2Q12800 502 aa9.17□□□□□ -0.94
IFT88-201ENST00000319980 DNAJC10Q8IXB1 793 aa9.17□□□□□ -0.94
IFT88-201ENST00000319980 FNBP4Q8N3X1 1017 aaPredicted RBP9.17□□□□□ -0.94
IFT88-201ENST00000319980 GBP4Q96PP9 640 aa9.17□□□□□ -0.94
IFT88-201ENST00000319980 GZF1Q9H116 711 aaPredicted RBP9.17□□□□□ -0.94
IFT88-201ENST00000319980 COL14A1Q05707 1796 aaKnown RBP9.17□□□□□ -0.94
IFT88-201ENST00000319980 RAD50Q92878 1312 aa9.17□□□□□ -0.94
IFT88-201ENST00000319980 DDX11L8A8MPP1 907 aa9.17□□□□□ -0.94
IFT88-201ENST00000319980 TRAK2O60296 914 aa9.17□□□□□ -0.94
IFT88-201ENST00000319980 ADAMTS2O95450 1211 aa9.17□□□□□ -0.94
IFT88-201ENST00000319980 RUFY2Q8WXA3 655 aa9.17□□□□□ -0.94
IFT88-201ENST00000319980 TMX3Q96JJ7 454 aa9.17□□□□□ -0.94
IFT88-201ENST00000319980 LSG1Q9H089 658 aaKnown RBP9.17□□□□□ -0.94
IFT88-201ENST00000319980 ATG3Q9NT62 314 aa9.17□□□□□ -0.94
IFT88-201ENST00000319980 EXOC5O00471 708 aa9.16□□□□□ -0.94
IFT88-201ENST00000319980 EPB41L2O43491 1005 aaKnown RBP9.16□□□□□ -0.94
IFT88-201ENST00000319980 FOXO4P98177 505 aa9.16□□□□□ -0.94
IFT88-201ENST00000319980 CCDC191Q8NCU4 936 aa9.16□□□□□ -0.94
IFT88-201ENST00000319980 KCPQ6ZWJ8 1503 aa9.16□□□□□ -0.94
IFT88-201ENST00000319980 PKP1Q13835 747 aa9.16□□□□□ -0.94
IFT88-201ENST00000319980 BBXQ8WY36 941 aaPredicted RBP9.16□□□□□ -0.94
IFT88-201ENST00000319980 FBXO3Q9UK99 471 aa9.16□□□□□ -0.94
IFT88-201ENST00000319980 TNS2Q63HR2 1409 aa9.16□□□□□ -0.94
IFT88-201ENST00000319980 STARD3NLO95772 234 aa9.16□□□□□ -0.94
IFT88-201ENST00000319980 MCM2P49736 904 aa9.16□□□□□ -0.94
IFT88-201ENST00000319980 TNNI3KQ59H18 835 aa9.16□□□□□ -0.94
IFT88-201ENST00000319980 TEX13AQ9BXU3 409 aaPredicted RBP9.16□□□□□ -0.94
IFT88-201ENST00000319980 CWC22Q9HCG8 908 aaKnown RBP9.16□□□□□ -0.94
IFT88-201ENST00000319980 DBNLQ9UJU6 430 aaKnown RBP9.16□□□□□ -0.94
IFT88-201ENST00000319980 FPGT-TNNI3KV9GXZ4 949 aa9.16□□□□□ -0.94
IFT88-201ENST00000319980 GLI3P10071 1580 aa9.15□□□□□ -0.94
IFT88-201ENST00000319980 RASEFQ8IZ41 740 aa9.15□□□□□ -0.94
IFT88-201ENST00000319980 FAM227BQ96M60 508 aa9.15□□□□□ -0.94
IFT88-201ENST00000319980 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.94
IFT88-201ENST00000319980 NUCB2P80303 420 aa9.15□□□□□ -0.95
IFT88-201ENST00000319980 PTH1RQ03431 593 aa9.15□□□□□ -0.95
IFT88-201ENST00000319980 EDC3Q96F86 508 aaKnown RBP9.15□□□□□ -0.95
IFT88-201ENST00000319980 FSD1Q9BTV5 496 aa9.15□□□□□ -0.95
IFT88-201ENST00000319980 SNX14Q9Y5W7 946 aa9.15□□□□□ -0.95
IFT88-201ENST00000319980 COL15A1P39059 1388 aa9.15□□□□□ -0.95
IFT88-201ENST00000319980 BCL9LQ86UU0 1499 aa9.14□□□□□ -0.95
IFT88-201ENST00000319980 TUBGCP6Q96RT7 1819 aa9.14□□□□□ -0.95
IFT88-201ENST00000319980 A0A0G2JS52 829 aa9.14□□□□□ -0.95
IFT88-201ENST00000319980 NMIQ13287 307 aaPredicted RBP9.14□□□□□ -0.95
IFT88-201ENST00000319980 TCIRG1Q13488 830 aa9.14□□□□□ -0.95
IFT88-201ENST00000319980 KIF6Q6ZMV9 814 aa9.14□□□□□ -0.95
IFT88-201ENST00000319980 IL17RAQ96F46 866 aa9.14□□□□□ -0.95
IFT88-201ENST00000319980 DBNDD2Q9BQY9 259 aa9.14□□□□□ -0.95
IFT88-201ENST00000319980 NDUFB9Q9Y6M9 179 aa9.14□□□□□ -0.95
IFT88-201ENST00000319980 PRIM1P49642 420 aaKnown RBP9.13□□□□□ -0.95
IFT88-201ENST00000319980 ZNF594Q96JF6 807 aaPredicted RBP9.13□□□□□ -0.95
IFT88-201ENST00000319980 NEUROD6Q96NK8 337 aa9.13□□□□□ -0.95
IFT88-201ENST00000319980 NUTM2BA6NNL0 878 aaPredicted RBP9.13□□□□□ -0.95
IFT88-201ENST00000319980 NUTM2EB1AL46 878 aaPredicted RBP9.13□□□□□ -0.95
IFT88-201ENST00000319980 HIP1O00291 1037 aa9.13□□□□□ -0.95
IFT88-201ENST00000319980 ATP5JP18859 108 aa9.13□□□□□ -0.95
IFT88-201ENST00000319980 KCNJ4P48050 445 aa9.13□□□□□ -0.95
IFT88-201ENST00000319980 PRPF40BQ6NWY9 871 aaKnown RBP9.13□□□□□ -0.95
IFT88-201ENST00000319980 NUTM2AQ8IVF1 878 aaPredicted RBP9.13□□□□□ -0.95
IFT88-201ENST00000319980 FAM89AQ96GI7 184 aa9.13□□□□□ -0.95
IFT88-201ENST00000319980 SLC4A9Q96Q91 983 aa9.13□□□□□ -0.95
IFT88-201ENST00000319980 ISCA1Q9BUE6 129 aa9.13□□□□□ -0.95
IFT88-201ENST00000319980 THSD7AQ9UPZ6 1657 aa9.13□□□□□ -0.95
IFT88-201ENST00000319980 A0A0D9SFI3 127 aa9.13□□□□□ -0.95
IFT88-201ENST00000319980 GOLGA6L22H0YM25 854 aa9.13□□□□□ -0.95
IFT88-201ENST00000319980 BAG4O95429 457 aaKnown RBP9.13□□□□□ -0.95
IFT88-201ENST00000319980 TIMM10P62072 90 aa9.13□□□□□ -0.95
IFT88-201ENST00000319980 ATG9AQ7Z3C6 839 aa9.13□□□□□ -0.95
IFT88-201ENST00000319980 CCDC85AQ96PX6 553 aaPredicted RBP9.13□□□□□ -0.95
IFT88-201ENST00000319980 DNAJC2Q99543 621 aaKnown RBP9.13□□□□□ -0.95
IFT88-201ENST00000319980 DISP2A7MBM2 1401 aa9.12□□□□□ -0.95
IFT88-201ENST00000319980 ATXN8OSP0DMR3 200 aa9.12□□□□□ -0.95
IFT88-201ENST00000319980 CPA1P15085 419 aa9.12□□□□□ -0.95
IFT88-201ENST00000319980 LRRC24Q50LG9 513 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms