RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 TSHZ3Q63HK5 1081 aa15.96■□□□□ 0.15
CPNE1-201ENST00000317677 PLBD2Q8NHP8 589 aa15.96■□□□□ 0.15
CPNE1-201ENST00000317677 KAT6BQ8WYB5 2073 aa15.96■□□□□ 0.15
CPNE1-201ENST00000317677 SURF6O75683 361 aaKnown RBP15.96■□□□□ 0.15
CPNE1-201ENST00000317677 EPHA10Q5JZY3 1008 aa15.96■□□□□ 0.15
CPNE1-201ENST00000317677 DEFB132Q7Z7B7 95 aa15.96■□□□□ 0.15
CPNE1-201ENST00000317677 DNAJC10Q8IXB1 793 aa15.96■□□□□ 0.15
CPNE1-201ENST00000317677 BICC1Q9H694 974 aaKnown RBP15.96■□□□□ 0.15
CPNE1-201ENST00000317677 IL1RAPL2Q9NP60 686 aa15.96■□□□□ 0.15
CPNE1-201ENST00000317677 SDSP20132 328 aa15.95■□□□□ 0.14
CPNE1-201ENST00000317677 JARID2Q92833 1246 aaPredicted RBP15.95■□□□□ 0.14
CPNE1-201ENST00000317677 ATP5J2-PTCD1G3V325 749 aa15.95■□□□□ 0.14
CPNE1-201ENST00000317677 PDE4CQ08493 712 aa15.95■□□□□ 0.14
CPNE1-201ENST00000317677 NEXNQ0ZGT2 675 aa15.95■□□□□ 0.14
CPNE1-201ENST00000317677 RHPN1Q8TCX5 695 aa15.95■□□□□ 0.14
CPNE1-201ENST00000317677 C22orf23Q9BZE7 217 aa15.95■□□□□ 0.14
CPNE1-201ENST00000317677 GRPEL1Q9HAV7 217 aa15.95■□□□□ 0.14
CPNE1-201ENST00000317677 PA2G4Q9UQ80 394 aaKnown RBP15.95■□□□□ 0.14
CPNE1-201ENST00000317677 CDC45O75419 566 aa15.94■□□□□ 0.14
CPNE1-201ENST00000317677 CASP7P55210 303 aa15.94■□□□□ 0.14
CPNE1-201ENST00000317677 MARCH10Q8NA82 808 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-201ENST00000317677 UPF2Q9HAU5 1272 aaKnown RBP15.94■□□□□ 0.14
CPNE1-201ENST00000317677 RAB11FIP3O75154 756 aa15.93■□□□□ 0.14
CPNE1-201ENST00000317677 DDB1Q16531 1140 aa15.93■□□□□ 0.14
CPNE1-201ENST00000317677 MTERF4Q7Z6M4 381 aaKnown RBP15.93■□□□□ 0.14
CPNE1-201ENST00000317677 STAP2Q9UGK3 403 aa15.93■□□□□ 0.14
CPNE1-201ENST00000317677 MX1P20591 662 aa15.93■□□□□ 0.14
CPNE1-201ENST00000317677 PRIM1P49642 420 aaKnown RBP15.93■□□□□ 0.14
CPNE1-201ENST00000317677 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-201ENST00000317677 TNS1Q9HBL0 1735 aaKnown RBP15.92■□□□□ 0.14
CPNE1-201ENST00000317677 OFD1O75665 1012 aa15.92■□□□□ 0.14
CPNE1-201ENST00000317677 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
CPNE1-201ENST00000317677 TRIM37O94972 964 aa15.91■□□□□ 0.14
CPNE1-201ENST00000317677 KIAA1211Q6ZU35 1233 aa15.91■□□□□ 0.14
CPNE1-201ENST00000317677 NUTM1Q86Y26 1132 aa15.91■□□□□ 0.14
CPNE1-201ENST00000317677 KIF1BPQ96EK5 621 aa15.91■□□□□ 0.14
CPNE1-201ENST00000317677 ZBTB3Q9H5J0 574 aa15.91■□□□□ 0.14
CPNE1-201ENST00000317677 COL15A1P39059 1388 aa15.91■□□□□ 0.14
CPNE1-201ENST00000317677 TRAK2O60296 914 aa15.91■□□□□ 0.14
CPNE1-201ENST00000317677 TRIM44Q96DX7 344 aaPredicted RBP15.91■□□□□ 0.14
CPNE1-201ENST00000317677 RBM25P49756 843 aaKnown RBP15.9■□□□□ 0.14
CPNE1-201ENST00000317677 UTP14CQ5TAP6 766 aaKnown RBP15.9■□□□□ 0.14
CPNE1-201ENST00000317677 UBE3BQ7Z3V4 1068 aa15.9■□□□□ 0.14
CPNE1-201ENST00000317677 SYTL4Q96C24 671 aaPredicted RBP15.9■□□□□ 0.14
CPNE1-201ENST00000317677 CYP19A1P11511 503 aaPredicted RBP15.89■□□□□ 0.13
CPNE1-201ENST00000317677 A0A087WZG4 1122 aa15.89■□□□□ 0.13
CPNE1-201ENST00000317677 H7C1W4 665 aa15.89■□□□□ 0.13
CPNE1-201ENST00000317677 RFX5P48382 616 aaPredicted RBP15.89■□□□□ 0.13
CPNE1-201ENST00000317677 EN1Q05925 392 aaPredicted RBP15.89■□□□□ 0.13
CPNE1-201ENST00000317677 KLHDC4Q8TBB5 520 aa15.89■□□□□ 0.13
CPNE1-201ENST00000317677 ACSBG1Q96GR2 724 aa15.89■□□□□ 0.13
CPNE1-201ENST00000317677 KIF2CQ99661 725 aa15.89■□□□□ 0.13
CPNE1-201ENST00000317677 SLKQ9H2G2 1235 aaPredicted RBP15.89■□□□□ 0.13
CPNE1-201ENST00000317677 HDAC5Q9UQL6 1122 aa15.89■□□□□ 0.13
CPNE1-201ENST00000317677 SASH1O94885 1247 aa15.88■□□□□ 0.13
CPNE1-201ENST00000317677 APBA3O96018 575 aa15.88■□□□□ 0.13
CPNE1-201ENST00000317677 NCLP19338 710 aaKnown RBP15.88■□□□□ 0.13
CPNE1-201ENST00000317677 RABL6Q3YEC7 729 aaPredicted RBP15.88■□□□□ 0.13
CPNE1-201ENST00000317677 PI4K2BQ8TCG2 481 aa15.88■□□□□ 0.13
CPNE1-201ENST00000317677 TEX13AQ9BXU3 409 aaPredicted RBP15.88■□□□□ 0.13
CPNE1-201ENST00000317677 AK9Q5TCS8 1911 aa15.88■□□□□ 0.13
CPNE1-201ENST00000317677 CICQ96RK0 1608 aaPredicted RBP15.88■□□□□ 0.13
CPNE1-201ENST00000317677 AOX1Q06278 1338 aa15.88■□□□□ 0.13
CPNE1-201ENST00000317677 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.87■□□□□ 0.13
CPNE1-201ENST00000317677 ANKRD36CQ5JPF3 1778 aa15.87■□□□□ 0.13
CPNE1-201ENST00000317677 RREB1Q92766 1687 aa15.87■□□□□ 0.13
CPNE1-201ENST00000317677 HSP90AB4PQ58FF6 505 aa15.87■□□□□ 0.13
CPNE1-201ENST00000317677 ISCA1Q9BUE6 129 aa15.87■□□□□ 0.13
CPNE1-201ENST00000317677 SBF2Q86WG5 1849 aa15.86■□□□□ 0.13
CPNE1-201ENST00000317677 FOXO4P98177 505 aa15.86■□□□□ 0.13
CPNE1-201ENST00000317677 TBC1D2Q9BYX2 928 aa15.86■□□□□ 0.13
CPNE1-201ENST00000317677 ZBTB1Q9Y2K1 713 aa15.86■□□□□ 0.13
CPNE1-201ENST00000317677 USP42Q9H9J4 1324 aaKnown RBP15.86■□□□□ 0.13
CPNE1-201ENST00000317677 STARD3NLO95772 234 aa15.86■□□□□ 0.13
CPNE1-201ENST00000317677 CWC25Q9NXE8 425 aaPredicted RBP15.86■□□□□ 0.13
CPNE1-201ENST00000317677 CHMP5Q9NZZ3 219 aa15.86■□□□□ 0.13
CPNE1-201ENST00000317677 NUP98P52948 1817 aa15.85■□□□□ 0.13
CPNE1-201ENST00000317677 MYH14Q7Z406 1995 aaKnown RBP15.85■□□□□ 0.13
CPNE1-201ENST00000317677 DDX11L8A8MPP1 907 aa15.85■□□□□ 0.13
CPNE1-201ENST00000317677 PTPN12Q05209 780 aaKnown RBP15.85■□□□□ 0.13
CPNE1-201ENST00000317677 OS9Q13438 667 aaPredicted RBP15.85■□□□□ 0.13
CPNE1-201ENST00000317677 PPP1R9BQ96SB3 815 aa15.85■□□□□ 0.13
CPNE1-201ENST00000317677 SIL1Q9H173 461 aa15.85■□□□□ 0.13
CPNE1-201ENST00000317677 ZNF330Q9Y3S2 320 aaPredicted RBP15.85■□□□□ 0.13
CPNE1-201ENST00000317677 CCDC191Q8NCU4 936 aa15.84■□□□□ 0.13
CPNE1-201ENST00000317677 KCNQ2O43526 872 aa15.84■□□□□ 0.13
CPNE1-201ENST00000317677 TCIRG1Q13488 830 aa15.84■□□□□ 0.13
CPNE1-201ENST00000317677 EZH2Q15910 746 aaKnown RBP15.84■□□□□ 0.13
CPNE1-201ENST00000317677 ZSCAN30Q86W11 494 aa15.84■□□□□ 0.13
CPNE1-201ENST00000317677 CAMKK2Q96RR4 588 aa15.84■□□□□ 0.13
CPNE1-201ENST00000317677 USP26Q9BXU7 913 aa15.84■□□□□ 0.13
CPNE1-201ENST00000317677 COPRSQ9NQ92 184 aa15.84■□□□□ 0.13
CPNE1-201ENST00000317677 COL5A3P25940 1745 aaPredicted RBP15.83■□□□□ 0.13
CPNE1-201ENST00000317677 HLFQ16534 295 aa15.83■□□□□ 0.12
CPNE1-201ENST00000317677 ERC1Q8IUD2 1116 aa15.83■□□□□ 0.12
CPNE1-201ENST00000317677 EAF2Q96CJ1 260 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-201ENST00000317677 MAP3K15Q6ZN16 1313 aa15.83■□□□□ 0.12
CPNE1-201ENST00000317677 MAP4K4O95819 1239 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-201ENST00000317677 LMBR1LQ6UX01 489 aa15.82■□□□□ 0.12
CPNE1-201ENST00000317677 CHMLP26374 656 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms