RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 KIF24Q5T7B8 1368 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC194A0A1B0GVG4 234 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 STAMBPO95630 424 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 GNA11P29992 359 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 ABCD1P33897 745 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 MRE11P49959 708 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 EIF6P56537 245 aaKnown RBP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 BICDL1Q6ZP65 573 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 TMC4Q7Z404 712 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 PPM1EQ8WY54 764 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 CRBNQ96SW2 442 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 IMPG2Q9BZV3 1241 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 GZF1Q9H116 711 aaPredicted RBP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 RMND1Q9NWS8 449 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 ARHGEF5Q12774 1597 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 PRC1O43663 620 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 PTCD1O75127 700 aaKnown RBP3.68□□□□□ -1.82
CLOCK-201ENST00000309964 MAP9Q49MG5 647 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 ANKRD13DQ6ZTN6 518 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 DDX11Q96FC9 970 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 NAA15Q9BXJ9 866 aaKnown RBP3.68□□□□□ -1.82
CLOCK-201ENST00000309964 RSPH6AQ9H0K4 717 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 ABCC1P33527 1531 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.68□□□□□ -1.82
CLOCK-201ENST00000309964 SPDYE3A6NKU9 549 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 SERPINC1P01008 464 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 ACTN2P35609 894 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 DUSP27Q5VZP5 1158 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 FILIP1Q7Z7B0 1213 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 EHBP1Q8NDI1 1231 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 SSX2IPQ9Y2D8 614 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 IL15P40933 162 aaPredicted RBP3.68□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC14Q49A88 953 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 ATL3Q6DD88 541 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 RTL1A6NKG5 1358 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 ARID4AP29374 1257 aaPredicted RBP3.68□□□□□ -1.82
CLOCK-201ENST00000309964 OTUD7BQ6GQQ9 843 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 MFSD6Q6ZSS7 791 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 NOL8Q76FK4 1167 aaKnown RBP3.68□□□□□ -1.82
CLOCK-201ENST00000309964 RNF216Q9NWF9 866 aaPredicted RBP3.68□□□□□ -1.82
CLOCK-201ENST00000309964 MYO9BQ13459 2157 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 NUP133Q8WUM0 1156 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 KAT14Q9H8E8 782 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 C6orf50Q9HD87 102 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 ZFYVE16Q7Z3T8 1539 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 USO1O60763 962 aaKnown RBP3.68□□□□□ -1.82
CLOCK-201ENST00000309964 CNGA1P29973 690 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 SLC8A3P57103 927 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 EXOSC9Q06265 439 aaKnown RBP3.68□□□□□ -1.82
CLOCK-201ENST00000309964 CEP128Q6ZU80 1094 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 PAXIP1Q6ZW49 1069 aaPredicted RBP3.68□□□□□ -1.82
CLOCK-201ENST00000309964 TTC6Q86TZ1 520 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 TANGO6Q9C0B7 1094 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 NOB1Q9ULX3 412 aaKnown RBP3.68□□□□□ -1.82
CLOCK-201ENST00000309964 KDM5CP41229 1560 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 NDC80O14777 642 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC117Q8IWD4 279 aaPredicted RBP3.68□□□□□ -1.82
CLOCK-201ENST00000309964 CDAN1Q8IWY9 1227 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 TRIM5Q9C035 493 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 CEP83Q9Y592 693 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 ABCA8O94911 1581 aa3.68□□□□□ -1.82
CLOCK-201ENST00000309964 ZSCAN12O43309 604 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 NEMFO60524 1076 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 NOP2P46087 812 aaKnown RBP3.67□□□□□ -1.82
CLOCK-201ENST00000309964 CTAGE1Q96RT6 745 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC94Q9BW85 323 aaPredicted RBP3.67□□□□□ -1.82
CLOCK-201ENST00000309964 NPATQ14207 1427 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 HECW2Q9P2P5 1572 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 ACEP12821 1306 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 GOLGA4Q13439 2230 aaKnown RBP3.67□□□□□ -1.82
CLOCK-201ENST00000309964 TSPY2A6NKD2 308 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 ALDH1L1O75891 902 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 ATP6V1AP38606 617 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 PDCL2Q8N4E4 241 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 SIRT1Q96EB6 747 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 HOMER2Q9NSB8 354 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 STK32BQ9NY57 414 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 YTHDC2Q9H6S0 1430 aaKnown RBP3.67□□□□□ -1.82
CLOCK-201ENST00000309964 TUBB4AP04350 444 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 MCM5P33992 734 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 RBM25P49756 843 aaKnown RBP3.67□□□□□ -1.82
CLOCK-201ENST00000309964 FLIIQ13045 1269 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 KIAA1524Q8TCG1 905 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 C8orf76Q96K31 380 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 FAM177BA6PVY3 158 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 PCP11498 1178 aaKnown RBP3.67□□□□□ -1.82
CLOCK-201ENST00000309964 KCNA6P17658 529 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 UBA7P41226 1012 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 AXDND1Q5T1B0 1012 aaPredicted RBP3.67□□□□□ -1.82
CLOCK-201ENST00000309964 NCOA7Q8NI08 942 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 WDR66Q8TBY9 1149 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 NLRP1Q9C000 1473 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 CALRP27797 417 aaKnown RBP3.67□□□□□ -1.82
CLOCK-201ENST00000309964 SPA17Q15506 151 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 CACNA2D4Q7Z3S7 1137 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 TICAM2Q86XR7 235 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 INCENPQ9NQS7 918 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 KDM5DQ9BY66 1539 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 NOS1P29475 1434 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 GCOM1H8Y6P7 765 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms