RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 MAP3K2Q9Y2U5 619 aa25.3■■□□□ 1.64
VEGFB-201ENST00000309422 RIC1Q4ADV7 1423 aa25.29■■□□□ 1.64
VEGFB-201ENST00000309422 ATP5J2-PTCD1G3V325 749 aa25.29■■□□□ 1.64
VEGFB-201ENST00000309422 CT47B1P0C2W7 299 aaPredicted RBP25.29■■□□□ 1.64
VEGFB-201ENST00000309422 NPR1P16066 1061 aa25.29■■□□□ 1.64
VEGFB-201ENST00000309422 NLRP3Q96P20 1036 aa25.29■■□□□ 1.64
VEGFB-201ENST00000309422 CDCA7LQ96GN5 454 aa25.28■■□□□ 1.64
VEGFB-201ENST00000309422 METTL22Q9BUU2 404 aaPredicted RBP25.28■■□□□ 1.64
VEGFB-201ENST00000309422 ANKRD36CQ5JPF3 1778 aa25.28■■□□□ 1.64
VEGFB-201ENST00000309422 ABCC12Q96J65 1359 aa25.27■■□□□ 1.64
VEGFB-201ENST00000309422 KIAA1551Q9HCM1 1747 aa25.27■■□□□ 1.64
VEGFB-201ENST00000309422 PI4KAP2A4QPH2 592 aa25.27■■□□□ 1.64
VEGFB-201ENST00000309422 KCNA3P22001 575 aa25.27■■□□□ 1.64
VEGFB-201ENST00000309422 PI4KAP1Q8N8J0 262 aa25.27■■□□□ 1.64
VEGFB-201ENST00000309422 ISCA1Q9BUE6 129 aa25.27■■□□□ 1.64
VEGFB-201ENST00000309422 CWC25Q9NXE8 425 aaPredicted RBP25.27■■□□□ 1.64
VEGFB-201ENST00000309422 SRGNP10124 158 aa25.26■■□□□ 1.63
VEGFB-201ENST00000309422 YY1P25490 414 aa25.26■■□□□ 1.63
VEGFB-201ENST00000309422 SOGA3Q5TF21 947 aa25.26■■□□□ 1.63
VEGFB-201ENST00000309422 CCDC191Q8NCU4 936 aa25.26■■□□□ 1.63
VEGFB-201ENST00000309422 ARFGEF2Q9Y6D5 1785 aa25.25■■□□□ 1.63
VEGFB-201ENST00000309422 ALDH1B1P30837 517 aa25.25■■□□□ 1.63
VEGFB-201ENST00000309422 ARHGAP27Q6ZUM4 889 aa25.25■■□□□ 1.63
VEGFB-201ENST00000309422 TMX4Q9H1E5 349 aaPredicted RBP25.25■■□□□ 1.63
VEGFB-201ENST00000309422 TRIM28Q13263 835 aaKnown RBP25.24■■□□□ 1.63
VEGFB-201ENST00000309422 ZBED9Q6R2W3 1325 aa25.23■■□□□ 1.63
VEGFB-201ENST00000309422 DNAAF4Q8WXU2 420 aa25.23■■□□□ 1.63
VEGFB-201ENST00000309422 RBM17Q96I25 401 aaKnown RBP25.23■■□□□ 1.63
VEGFB-201ENST00000309422 G2E3Q7L622 706 aa25.22■■□□□ 1.63
VEGFB-201ENST00000309422 SMC4Q9NTJ3 1288 aa25.22■■□□□ 1.63
VEGFB-201ENST00000309422 KLRG2A4D1S0 409 aaPredicted RBP25.21■■□□□ 1.63
VEGFB-201ENST00000309422 ALDH1L2Q3SY69 923 aa25.21■■□□□ 1.63
VEGFB-201ENST00000309422 PRPF40BQ6NWY9 871 aaKnown RBP25.21■■□□□ 1.63
VEGFB-201ENST00000309422 DLEC1Q9Y238 1755 aa25.21■■□□□ 1.63
VEGFB-201ENST00000309422 ADCY9O60503 1353 aa25.21■■□□□ 1.63
VEGFB-201ENST00000309422 ANKRD31Q8N7Z5 1873 aa25.21■■□□□ 1.63
VEGFB-201ENST00000309422 ZBTB38Q8NAP3 1195 aaPredicted RBP25.2■■□□□ 1.63
VEGFB-201ENST00000309422 CRY2Q49AN0 593 aa25.19■■□□□ 1.62
VEGFB-201ENST00000309422 SLC10A5Q5PT55 438 aa25.19■■□□□ 1.62
VEGFB-201ENST00000309422 TRMT2AQ8IZ69 625 aaKnown RBP25.19■■□□□ 1.62
VEGFB-201ENST00000309422 FAM89AQ96GI7 184 aa25.19■■□□□ 1.62
VEGFB-201ENST00000309422 PTPRCP08575 1304 aa25.19■■□□□ 1.62
VEGFB-201ENST00000309422 COL11A2P13942 1736 aaPredicted RBP25.19■■□□□ 1.62
VEGFB-201ENST00000309422 HCLS1P14317 486 aaPredicted RBP25.18■■□□□ 1.62
VEGFB-201ENST00000309422 RTL5Q5HYW3 569 aaPredicted RBP25.18■■□□□ 1.62
VEGFB-201ENST00000309422 DDX46Q7L014 1031 aaKnown RBP25.18■■□□□ 1.62
VEGFB-201ENST00000309422 ZNF219Q9P2Y4 722 aaPredicted RBP25.18■■□□□ 1.62
VEGFB-201ENST00000309422 BRCA1P38398 1863 aaKnown RBP25.18■■□□□ 1.62
VEGFB-201ENST00000309422 GOLGB1Q14789 3259 aaKnown RBP25.18■■□□□ 1.62
VEGFB-201ENST00000309422 IRS4O14654 1257 aaPredicted RBP25.18■■□□□ 1.62
VEGFB-201ENST00000309422 PCCAP05165 728 aaPredicted RBP25.17■■□□□ 1.62
VEGFB-201ENST00000309422 LINS1Q8NG48 757 aa25.17■■□□□ 1.62
VEGFB-201ENST00000309422 C21orf2O43822 256 aa25.16■■□□□ 1.62
VEGFB-201ENST00000309422 CCDC93Q567U6 631 aa25.16■■□□□ 1.62
VEGFB-201ENST00000309422 SLC4A10Q6U841 1118 aa25.16■■□□□ 1.62
VEGFB-201ENST00000309422 SSH1Q8WYL5 1049 aa25.16■■□□□ 1.62
VEGFB-201ENST00000309422 TNRC6CQ9HCJ0 1690 aaKnown RBP25.16■■□□□ 1.62
VEGFB-201ENST00000309422 CACNA1FO60840 1977 aa25.15■■□□□ 1.62
VEGFB-201ENST00000309422 NEURL1BA8MQ27 555 aa25.15■■□□□ 1.62
VEGFB-201ENST00000309422 CRAMP1Q96RY5 1269 aa25.15■■□□□ 1.62
VEGFB-201ENST00000309422 BCL2L13Q9BXK5 485 aa25.15■■□□□ 1.62
VEGFB-201ENST00000309422 ARFGEF1Q9Y6D6 1849 aa25.14■■□□□ 1.62
VEGFB-201ENST00000309422 HOXA10P31260 410 aaPredicted RBP25.14■■□□□ 1.61
VEGFB-201ENST00000309422 CWF19L2Q2TBE0 894 aaKnown RBP25.14■■□□□ 1.61
VEGFB-201ENST00000309422 MRPL50Q8N5N7 158 aaKnown RBP25.14■■□□□ 1.61
VEGFB-201ENST00000309422 PPEF1O14829 653 aaPredicted RBP25.13■■□□□ 1.61
VEGFB-201ENST00000309422 CC2D2BQ6DHV5 1058 aa25.13■■□□□ 1.61
VEGFB-201ENST00000309422 TAOK3Q9H2K8 898 aa25.13■■□□□ 1.61
VEGFB-201ENST00000309422 KIF16BQ96L93 1317 aa25.13■■□□□ 1.61
VEGFB-201ENST00000309422 UTRNP46939 3433 aa25.13■■□□□ 1.61
VEGFB-201ENST00000309422 F6X3S4 739 aa25.12■■□□□ 1.61
VEGFB-201ENST00000309422 IGKV5-2P06315 115 aa25.12■■□□□ 1.61
VEGFB-201ENST00000309422 CCDC152Q4G0S7 254 aa25.12■■□□□ 1.61
VEGFB-201ENST00000309422 GRIPAP1Q4V328 841 aa25.12■■□□□ 1.61
VEGFB-201ENST00000309422 PDE8AO60658 829 aa25.11■■□□□ 1.61
VEGFB-201ENST00000309422 RTKN2Q8IZC4 609 aa25.11■■□□□ 1.61
VEGFB-201ENST00000309422 SRCIN1Q9C0H9 1055 aa25.11■■□□□ 1.61
VEGFB-201ENST00000309422 CDHR2Q9BYE9 1310 aa25.11■■□□□ 1.61
VEGFB-201ENST00000309422 GCKRQ14397 625 aa25.1■■□□□ 1.61
VEGFB-201ENST00000309422 TMC4Q7Z404 712 aa25.1■■□□□ 1.61
VEGFB-201ENST00000309422 SYNE4Q8N205 404 aa25.1■■□□□ 1.61
VEGFB-201ENST00000309422 UBE3BQ7Z3V4 1068 aa25.09■■□□□ 1.61
VEGFB-201ENST00000309422 ABCC4O15439 1325 aa25.09■■□□□ 1.61
VEGFB-201ENST00000309422 ALDH1L1O75891 902 aa25.08■■□□□ 1.61
VEGFB-201ENST00000309422 BBOX1O75936 387 aa25.08■■□□□ 1.61
VEGFB-201ENST00000309422 LMNB1P20700 586 aa25.08■■□□□ 1.61
VEGFB-201ENST00000309422 GRAPQ13588 217 aa25.08■■□□□ 1.61
VEGFB-201ENST00000309422 SF3B3Q15393 1217 aaKnown RBP25.08■■□□□ 1.61
VEGFB-201ENST00000309422 C3orf67Q6ZVT6 689 aa25.08■■□□□ 1.61
VEGFB-201ENST00000309422 GRAPLQ8TC17 118 aaPredicted RBP25.08■■□□□ 1.61
VEGFB-201ENST00000309422 API5Q9BZZ5 524 aaKnown RBP25.08■■□□□ 1.61
VEGFB-201ENST00000309422 C9orf78Q9NZ63 289 aaPredicted RBP25.08■■□□□ 1.61
VEGFB-201ENST00000309422 RNF181Q9P0P0 153 aa25.08■■□□□ 1.61
VEGFB-201ENST00000309422 CHD4Q14839 1912 aa25.08■■□□□ 1.61
VEGFB-201ENST00000309422 RASSF7Q02833 373 aa25.07■■□□□ 1.6
VEGFB-201ENST00000309422 C9orf131Q5VYM1 1079 aa25.07■■□□□ 1.6
VEGFB-201ENST00000309422 IPO8O15397 1037 aaKnown RBP25.06■■□□□ 1.6
VEGFB-201ENST00000309422 BEND3Q5T5X7 828 aa25.06■■□□□ 1.6
VEGFB-201ENST00000309422 RARSP54136 660 aaKnown RBP25.05■■□□□ 1.6
VEGFB-201ENST00000309422 CTSWP56202 376 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms