RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 CHGBP05060 677 aa24.99■■□□□ 1.59
RELA-201ENST00000308639 DDX17Q92841 729 aaKnown RBP24.99■■□□□ 1.59
RELA-201ENST00000308639 CHMP4AQ9BY43 222 aa24.99■■□□□ 1.59
RELA-201ENST00000308639 DDX21Q9NR30 783 aaKnown RBP eCLIP24.99■■□□□ 1.59
RELA-201ENST00000308639 ERC1Q8IUD2 1116 aa24.99■■□□□ 1.59
RELA-201ENST00000308639 TPCN1Q9ULQ1 816 aa24.99■■□□□ 1.59
RELA-201ENST00000308639 MTMR6Q9Y217 621 aa24.99■■□□□ 1.59
RELA-201ENST00000308639 RGPD5Q99666 1765 aa24.98■■□□□ 1.59
RELA-201ENST00000308639 HCLS1P14317 486 aaPredicted RBP24.98■■□□□ 1.59
RELA-201ENST00000308639 VPS53Q5VIR6 699 aa24.98■■□□□ 1.59
RELA-201ENST00000308639 USP25Q9UHP3 1055 aa24.98■■□□□ 1.59
RELA-201ENST00000308639 FAM173BQ6P4H8 233 aa24.97■■□□□ 1.59
RELA-201ENST00000308639 TMEM87AQ8NBN3 555 aa24.97■■□□□ 1.59
RELA-201ENST00000308639 NFATC2IPQ8NCF5 419 aa24.97■■□□□ 1.59
RELA-201ENST00000308639 XAGE3Q8WTP9 111 aa24.97■■□□□ 1.59
RELA-201ENST00000308639 MYD88Q99836 296 aa24.97■■□□□ 1.59
RELA-201ENST00000308639 PTMAP06454 111 aaKnown RBP24.97■■□□□ 1.59
RELA-201ENST00000308639 KRT28Q7Z3Y7 464 aa24.97■■□□□ 1.59
RELA-201ENST00000308639 FERMT3Q86UX7 667 aa24.97■■□□□ 1.59
RELA-201ENST00000308639 ZNF830Q96NB3 372 aaPredicted RBP24.97■■□□□ 1.59
RELA-201ENST00000308639 FSD1Q9BTV5 496 aa24.97■■□□□ 1.59
RELA-201ENST00000308639 ZNF589Q86UQ0 364 aaPredicted RBP24.96■■□□□ 1.59
RELA-201ENST00000308639 ZNF500O60304 480 aaPredicted RBP24.96■■□□□ 1.59
RELA-201ENST00000308639 NCAPD2Q15021 1401 aa24.96■■□□□ 1.59
RELA-201ENST00000308639 CCDC183Q5T5S1 534 aa24.96■■□□□ 1.59
RELA-201ENST00000308639 GIMAP6Q6P9H5 292 aa24.96■■□□□ 1.59
RELA-201ENST00000308639 ZNF790Q6PG37 636 aa24.96■■□□□ 1.59
RELA-201ENST00000308639 COPS6Q7L5N1 327 aa24.96■■□□□ 1.59
RELA-201ENST00000308639 NLRP2Q9NX02 1062 aa24.96■■□□□ 1.59
RELA-201ENST00000308639 CCDC39Q9UFE4 941 aa24.95■■□□□ 1.58
RELA-201ENST00000308639 SLC27A2O14975 620 aa24.95■■□□□ 1.58
RELA-201ENST00000308639 DDX58O95786 925 aaKnown RBP24.95■■□□□ 1.58
RELA-201ENST00000308639 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.95■■□□□ 1.58
RELA-201ENST00000308639 UBE2HP62256 183 aa24.94■■□□□ 1.58
RELA-201ENST00000308639 MAP4K1Q92918 833 aa24.94■■□□□ 1.58
RELA-201ENST00000308639 CHMP3Q9Y3E7 222 aa24.94■■□□□ 1.58
RELA-201ENST00000308639 NEURL1BA8MQ27 555 aa24.94■■□□□ 1.58
RELA-201ENST00000308639 PHF14O94880 888 aa24.94■■□□□ 1.58
RELA-201ENST00000308639 ZKSCAN1P17029 563 aaPredicted RBP24.94■■□□□ 1.58
RELA-201ENST00000308639 CCDC9Q9Y3X0 531 aaKnown RBP24.94■■□□□ 1.58
RELA-201ENST00000308639 PHRF1Q9P1Y6 1649 aaKnown RBP24.94■■□□□ 1.58
RELA-201ENST00000308639 ERBB3P21860 1342 aa24.93■■□□□ 1.58
RELA-201ENST00000308639 KCNB2Q92953 911 aa24.93■■□□□ 1.58
RELA-201ENST00000308639 ZNF496Q96IT1 587 aaPredicted RBP24.93■■□□□ 1.58
RELA-201ENST00000308639 USP16Q9Y5T5 823 aa24.93■■□□□ 1.58
RELA-201ENST00000308639 UTYO14607 1347 aa24.93■■□□□ 1.58
RELA-201ENST00000308639 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.92■■□□□ 1.584e-6■■□□□ 14.4
RELA-201ENST00000308639 STK3Q13188 491 aa24.92■■□□□ 1.58
RELA-201ENST00000308639 SLIT3O75094 1523 aa24.92■■□□□ 1.58
RELA-201ENST00000308639 TPM2P07951 284 aa24.91■■□□□ 1.58
RELA-201ENST00000308639 CDC37L1Q7L3B6 337 aa24.91■■□□□ 1.58
RELA-201ENST00000308639 TM6SF1Q9BZW5 370 aa24.91■■□□□ 1.58
RELA-201ENST00000308639 SIPA1L3O60292 1781 aaPredicted RBP24.91■■□□□ 1.58
RELA-201ENST00000308639 KDM6AO15550 1401 aaPredicted RBP24.91■■□□□ 1.58
RELA-201ENST00000308639 GCKRQ14397 625 aa24.91■■□□□ 1.58
RELA-201ENST00000308639 C5P01031 1676 aa24.91■■□□□ 1.58
RELA-201ENST00000308639 RBM10P98175 930 aaKnown RBP24.9■■□□□ 1.58
RELA-201ENST00000308639 CABLES1Q8TDN4 633 aa24.9■■□□□ 1.58
RELA-201ENST00000308639 SLC52A2Q9HAB3 445 aa24.9■■□□□ 1.58
RELA-201ENST00000308639 ATP5J2-PTCD1G3V325 749 aa24.9■■□□□ 1.58
RELA-201ENST00000308639 PTCD1O75127 700 aaKnown RBP24.9■■□□□ 1.58
RELA-201ENST00000308639 PLCB2Q00722 1185 aa24.9■■□□□ 1.58
RELA-201ENST00000308639 RAPGEF4Q8WZA2 1011 aa24.9■■□□□ 1.58
RELA-201ENST00000308639 NPHP3Q7Z494 1330 aa24.89■■□□□ 1.58
RELA-201ENST00000308639 LARP1Q6PKG0 1096 aaKnown RBP24.89■■□□□ 1.58
RELA-201ENST00000308639 SH2B1Q9NRF2 756 aaPredicted RBP24.89■■□□□ 1.58
RELA-201ENST00000308639 LARP1BQ659C4 914 aaKnown RBP24.89■■□□□ 1.57
RELA-201ENST00000308639 ZSCAN31Q96LW9 406 aaPredicted RBP24.89■■□□□ 1.57
RELA-201ENST00000308639 NPHP4O75161 1426 aaPredicted RBP24.88■■□□□ 1.57
RELA-201ENST00000308639 NEXNQ0ZGT2 675 aa24.88■■□□□ 1.57
RELA-201ENST00000308639 CCDC129Q6ZRS4 1044 aa24.88■■□□□ 1.57
RELA-201ENST00000308639 C17orf53Q8N3J3 647 aaPredicted RBP24.88■■□□□ 1.57
RELA-201ENST00000308639 OVOS2A0A0G2JMS6 1433 aa24.88■■□□□ 1.57
RELA-201ENST00000308639 ADCY5O95622 1261 aa24.88■■□□□ 1.57
RELA-201ENST00000308639 SEC62Q99442 399 aaKnown RBP24.88■■□□□ 1.57
RELA-201ENST00000308639 DBNLQ9UJU6 430 aaKnown RBP24.88■■□□□ 1.57
RELA-201ENST00000308639 TFCP2Q12800 502 aa24.87■■□□□ 1.57
RELA-201ENST00000308639 UBE3BQ7Z3V4 1068 aa24.87■■□□□ 1.57
RELA-201ENST00000308639 HDAC5Q9UQL6 1122 aa24.87■■□□□ 1.57
RELA-201ENST00000308639 ATP6V1DQ9Y5K8 247 aa24.87■■□□□ 1.57
RELA-201ENST00000308639 COL15A1P39059 1388 aa24.87■■□□□ 1.57
RELA-201ENST00000308639 PHKG2P15735 406 aa24.87■■□□□ 1.57
RELA-201ENST00000308639 CHRNA2Q15822 529 aa24.87■■□□□ 1.57
RELA-201ENST00000308639 PROSER2Q86WR7 435 aaPredicted RBP24.87■■□□□ 1.57
RELA-201ENST00000308639 BLOC1S2Q6QNY1 142 aa24.86■■□□□ 1.57
RELA-201ENST00000308639 TTC6Q86TZ1 520 aa24.86■■□□□ 1.57
RELA-201ENST00000308639 METTL22Q9BUU2 404 aaPredicted RBP24.86■■□□□ 1.57
RELA-201ENST00000308639 TTC12Q9H892 705 aaPredicted RBP24.86■■□□□ 1.57
RELA-201ENST00000308639 TOB2Q14106 344 aaPredicted RBP24.86■■□□□ 1.57
RELA-201ENST00000308639 SLFNL1Q499Z3 407 aa24.86■■□□□ 1.57
RELA-201ENST00000308639 MED23Q9ULK4 1368 aa24.85■■□□□ 1.57
RELA-201ENST00000308639 DNAJC2Q99543 621 aaKnown RBP24.85■■□□□ 1.57
RELA-201ENST00000308639 AP5Z1O43299 807 aa24.85■■□□□ 1.57
RELA-201ENST00000308639 ANKRD13DQ6ZTN6 518 aa24.85■■□□□ 1.57
RELA-201ENST00000308639 MEGF6O75095 1541 aa24.84■■□□□ 1.57
RELA-201ENST00000308639 TFIP11Q9UBB9 837 aaKnown RBP24.84■■□□□ 1.57
RELA-201ENST00000308639 CSB-PGBD3P0DP91 1061 aa24.84■■□□□ 1.57
RELA-201ENST00000308639 RPS6KB1P23443 525 aa24.84■■□□□ 1.57
RELA-201ENST00000308639 FUCA2Q9BTY2 467 aa24.84■■□□□ 1.57
RELA-201ENST00000308639 HIP1O00291 1037 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms