RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 APBB1O00213 710 aa13.28□□□□□ -0.28
CASP3-201ENST00000308394 RXRBP28702 533 aa13.28□□□□□ -0.28
CASP3-201ENST00000308394 NUCB1Q02818 461 aa13.28□□□□□ -0.28
CASP3-201ENST00000308394 JARID2Q92833 1246 aaPredicted RBP13.28□□□□□ -0.28
CASP3-201ENST00000308394 ZBTB47Q9UFB7 747 aaPredicted RBP13.28□□□□□ -0.28
CASP3-201ENST00000308394 TJP1Q07157 1748 aa13.28□□□□□ -0.28
CASP3-201ENST00000308394 A0A087WZG4 1122 aa13.28□□□□□ -0.28
CASP3-201ENST00000308394 PPP1R42Q7Z4L9 355 aa13.28□□□□□ -0.28
CASP3-201ENST00000308394 CHD1LQ86WJ1 897 aa13.28□□□□□ -0.28
CASP3-201ENST00000308394 TBC1D2BQ9UPU7 963 aa13.28□□□□□ -0.28
CASP3-201ENST00000308394 SRGAP3O43295 1099 aa13.27□□□□□ -0.28
CASP3-201ENST00000308394 DZIP3Q86Y13 1208 aaKnown RBP13.27□□□□□ -0.28
CASP3-201ENST00000308394 ARFGEF2Q9Y6D5 1785 aa13.27□□□□□ -0.29
CASP3-201ENST00000308394 MAP3K15Q6ZN16 1313 aa13.27□□□□□ -0.29
CASP3-201ENST00000308394 TCIRG1Q13488 830 aa13.26□□□□□ -0.29
CASP3-201ENST00000308394 RTL5Q5HYW3 569 aaPredicted RBP13.26□□□□□ -0.29
CASP3-201ENST00000308394 UBE3BQ7Z3V4 1068 aa13.26□□□□□ -0.29
CASP3-201ENST00000308394 LINC00116Q8NCU8 138 aa13.26□□□□□ -0.29
CASP3-201ENST00000308394 SUCLG2Q96I99 432 aa13.26□□□□□ -0.29
CASP3-201ENST00000308394 CWC25Q9NXE8 425 aaPredicted RBP13.26□□□□□ -0.29
CASP3-201ENST00000308394 CCNL1Q9UK58 526 aaPredicted RBP13.26□□□□□ -0.29
CASP3-201ENST00000308394 NHSQ6T4R5 1651 aa13.26□□□□□ -0.29
CASP3-201ENST00000308394 UTYO14607 1347 aa13.26□□□□□ -0.29
CASP3-201ENST00000308394 TRIM37O94972 964 aa13.26□□□□□ -0.29
CASP3-201ENST00000308394 EIF5P55010 431 aaKnown RBP13.26□□□□□ -0.29
CASP3-201ENST00000308394 HLFQ16534 295 aa13.26□□□□□ -0.29
CASP3-201ENST00000308394 EXOC6BQ9Y2D4 811 aa13.26□□□□□ -0.29
CASP3-201ENST00000308394 CCDC191Q8NCU4 936 aa13.26□□□□□ -0.29
CASP3-201ENST00000308394 BTAF1O14981 1849 aa13.25□□□□□ -0.29
CASP3-201ENST00000308394 GIGYF2Q6Y7W6 1299 aaKnown RBP13.25□□□□□ -0.29
CASP3-201ENST00000308394 BICC1Q9H694 974 aaKnown RBP13.25□□□□□ -0.29
CASP3-201ENST00000308394 PDE4AP27815 886 aa13.25□□□□□ -0.29
CASP3-201ENST00000308394 SSH3Q8TE77 659 aa13.25□□□□□ -0.29
CASP3-201ENST00000308394 EP400Q96L91 3159 aa13.24□□□□□ -0.29
CASP3-201ENST00000308394 GPTP24298 496 aa13.24□□□□□ -0.29
CASP3-201ENST00000308394 KAZALD1Q96I82 304 aa13.24□□□□□ -0.29
CASP3-201ENST00000308394 BRWD3Q6RI45 1802 aa13.24□□□□□ -0.29
CASP3-201ENST00000308394 PTMSP20962 102 aa13.24□□□□□ -0.29
CASP3-201ENST00000308394 HSP90AB3PQ58FF7 597 aa13.24□□□□□ -0.29
CASP3-201ENST00000308394 ISCA1Q9BUE6 129 aa13.24□□□□□ -0.29
CASP3-201ENST00000308394 RGS17Q9UGC6 210 aaPredicted RBP13.24□□□□□ -0.29
CASP3-201ENST00000308394 ERVV-1B6SEH8 477 aa13.23□□□□□ -0.29
CASP3-201ENST00000308394 SMARCA5O60264 1052 aaPredicted RBP13.23□□□□□ -0.29
CASP3-201ENST00000308394 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
CASP3-201ENST00000308394 NUP188Q5SRE5 1749 aa13.23□□□□□ -0.29
CASP3-201ENST00000308394 IBTKQ9P2D0 1353 aaPredicted RBP13.23□□□□□ -0.29
CASP3-201ENST00000308394 POLA2Q14181 598 aa13.23□□□□□ -0.29
CASP3-201ENST00000308394 CC2D2BQ6DHV5 1058 aa13.23□□□□□ -0.29
CASP3-201ENST00000308394 AFDNP55196 1824 aaKnown RBP13.23□□□□□ -0.29
CASP3-201ENST00000308394 SBF2Q86WG5 1849 aa13.22□□□□□ -0.29
CASP3-201ENST00000308394 H7C1W4 665 aa13.22□□□□□ -0.29
CASP3-201ENST00000308394 EPHA10Q5JZY3 1008 aa13.22□□□□□ -0.29
CASP3-201ENST00000308394 POTEAQ6S8J7 498 aa13.22□□□□□ -0.29
CASP3-201ENST00000308394 MTX1Q13505 466 aa13.22□□□□□ -0.29
CASP3-201ENST00000308394 COL15A1P39059 1388 aa13.21□□□□□ -0.29
CASP3-201ENST00000308394 CNTNAP4Q9C0A0 1308 aa13.21□□□□□ -0.29
CASP3-201ENST00000308394 FAM193AP78312 1265 aa13.21□□□□□ -0.29
CASP3-201ENST00000308394 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
CASP3-201ENST00000308394 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.29
CASP3-201ENST00000308394 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.3
CASP3-201ENST00000308394 GNPATO15228 680 aa13.21□□□□□ -0.3
CASP3-201ENST00000308394 CASP7P55210 303 aa13.21□□□□□ -0.3
CASP3-201ENST00000308394 OS9Q13438 667 aaPredicted RBP13.21□□□□□ -0.3
CASP3-201ENST00000308394 SMIM5Q71RC9 77 aa13.21□□□□□ -0.3
CASP3-201ENST00000308394 C16orf71Q8IYS4 520 aaPredicted RBP13.21□□□□□ -0.3
CASP3-201ENST00000308394 CHMP3Q9Y3E7 222 aa13.21□□□□□ -0.3
CASP3-201ENST00000308394 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
CASP3-201ENST00000308394 RC3H1Q5TC82 1133 aaKnown RBP13.2□□□□□ -0.3
CASP3-201ENST00000308394 NLRP10Q86W26 655 aa13.2□□□□□ -0.3
CASP3-201ENST00000308394 FAM89AQ96GI7 184 aa13.2□□□□□ -0.3
CASP3-201ENST00000308394 PA2G4Q9UQ80 394 aaKnown RBP13.2□□□□□ -0.3
CASP3-201ENST00000308394 CICQ96RK0 1608 aaPredicted RBP13.2□□□□□ -0.3
CASP3-201ENST00000308394 CAMTA2O94983 1202 aa13.19□□□□□ -0.3
CASP3-201ENST00000308394 PTMAP06454 111 aaKnown RBP13.19□□□□□ -0.3
CASP3-201ENST00000308394 ZBTB38Q8NAP3 1195 aaPredicted RBP13.19□□□□□ -0.3
CASP3-201ENST00000308394 LRRC4BQ9NT99 713 aa13.19□□□□□ -0.3
CASP3-201ENST00000308394 RTCBQ9Y3I0 505 aaKnown RBP13.19□□□□□ -0.3
CASP3-201ENST00000308394 ZNF831Q5JPB2 1677 aa13.19□□□□□ -0.3
CASP3-201ENST00000308394 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
CASP3-201ENST00000308394 RAB11FIP3O75154 756 aa13.19□□□□□ -0.3
CASP3-201ENST00000308394 FAM161AQ3B820 660 aa13.19□□□□□ -0.3
CASP3-201ENST00000308394 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
CASP3-201ENST00000308394 LMBR1LQ6UX01 489 aa13.19□□□□□ -0.3
CASP3-201ENST00000308394 TRMT112Q9UI30 125 aaKnown RBP13.19□□□□□ -0.3
CASP3-201ENST00000308394 FAM177BA6PVY3 158 aa13.18□□□□□ -0.3
CASP3-201ENST00000308394 RPS6KA4O75676 772 aa13.18□□□□□ -0.3
CASP3-201ENST00000308394 MCCP23508 829 aa13.18□□□□□ -0.3
CASP3-201ENST00000308394 ZNF652Q9Y2D9 606 aa13.18□□□□□ -0.3
CASP3-201ENST00000308394 PCCAP05165 728 aaPredicted RBP13.18□□□□□ -0.3
CASP3-201ENST00000308394 FOXO4P98177 505 aa13.18□□□□□ -0.3
CASP3-201ENST00000308394 ZNF34Q8IZ26 560 aa13.18□□□□□ -0.3
CASP3-201ENST00000308394 FAM177A1Q8N128 213 aaPredicted RBP13.18□□□□□ -0.3
CASP3-201ENST00000308394 KLHDC4Q8TBB5 520 aa13.18□□□□□ -0.3
CASP3-201ENST00000308394 AK7Q96M32 723 aa13.18□□□□□ -0.3
CASP3-201ENST00000308394 BACH2Q9BYV9 841 aa13.18□□□□□ -0.3
CASP3-201ENST00000308394 SIL1Q9H173 461 aa13.18□□□□□ -0.3
CASP3-201ENST00000308394 IL1RAPL2Q9NP60 686 aa13.18□□□□□ -0.3
CASP3-201ENST00000308394 RABL6Q3YEC7 729 aaPredicted RBP13.17□□□□□ -0.3
CASP3-201ENST00000308394 SYNE4Q8N205 404 aa13.17□□□□□ -0.3
CASP3-201ENST00000308394 OTUD7AQ8TE49 926 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms