RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 TLR7Q9NYK1 1049 aaKnown RBP24.42■■□□□ 1.5
SSH3-202ENST00000308298 TEX13AQ9BXU3 409 aaPredicted RBP24.42■■□□□ 1.5
SSH3-202ENST00000308298 LSG1Q9H089 658 aaKnown RBP24.42■■□□□ 1.5
SSH3-202ENST00000308298 CCDC191Q8NCU4 936 aa24.41■■□□□ 1.5
SSH3-202ENST00000308298 CWC22Q9HCG8 908 aaKnown RBP24.41■■□□□ 1.5
SSH3-202ENST00000308298 ASAP1Q9ULH1 1129 aa24.41■■□□□ 1.5
SSH3-202ENST00000308298 KIAA1211Q6ZU35 1233 aa24.4■■□□□ 1.5
SSH3-202ENST00000308298 IL27Q8NEV9 243 aa24.4■■□□□ 1.5
SSH3-202ENST00000308298 FOXO4P98177 505 aa24.4■■□□□ 1.5
SSH3-202ENST00000308298 LMBR1LQ6UX01 489 aa24.4■■□□□ 1.5
SSH3-202ENST00000308298 ATG3Q9NT62 314 aa24.39■■□□□ 1.5
SSH3-202ENST00000308298 PHLPP1O60346 1717 aa24.38■■□□□ 1.49
SSH3-202ENST00000308298 HIP1O00291 1037 aa24.38■■□□□ 1.49
SSH3-202ENST00000308298 SSFA2P28290 1259 aa24.38■■□□□ 1.49
SSH3-202ENST00000308298 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.38■■□□□ 1.49
SSH3-202ENST00000308298 BCL9O00512 1426 aa24.38■■□□□ 1.49
SSH3-202ENST00000308298 NUCB2P80303 420 aa24.37■■□□□ 1.49
SSH3-202ENST00000308298 TFCP2Q12800 502 aa24.37■■□□□ 1.49
SSH3-202ENST00000308298 TNNI3KQ59H18 835 aa24.37■■□□□ 1.49
SSH3-202ENST00000308298 DNAJC10Q8IXB1 793 aa24.37■■□□□ 1.49
SSH3-202ENST00000308298 FPGT-TNNI3KV9GXZ4 949 aa24.37■■□□□ 1.49
SSH3-202ENST00000308298 TMX3Q96JJ7 454 aa24.37■■□□□ 1.49
SSH3-202ENST00000308298 TRAK2O60296 914 aa24.36■■□□□ 1.49
SSH3-202ENST00000308298 BOLA2Q9H3K6 86 aa24.36■■□□□ 1.49
SSH3-202ENST00000308298 NRAPQ86VF7 1730 aa24.36■■□□□ 1.49
SSH3-202ENST00000308298 EXOC5O00471 708 aa24.35■■□□□ 1.49
SSH3-202ENST00000308298 STARD3NLO95772 234 aa24.35■■□□□ 1.49
SSH3-202ENST00000308298 ZGPATQ8N5A5 531 aaKnown RBP24.35■■□□□ 1.49
SSH3-202ENST00000308298 ISCA1Q9BUE6 129 aa24.35■■□□□ 1.49
SSH3-202ENST00000308298 KAT6BQ8WYB5 2073 aa24.35■■□□□ 1.49
SSH3-202ENST00000308298 CLEC17AQ6ZS10 378 aa24.35■■□□□ 1.49
SSH3-202ENST00000308298 CHMP3Q9Y3E7 222 aa24.35■■□□□ 1.49
SSH3-202ENST00000308298 SNX14Q9Y5W7 946 aa24.35■■□□□ 1.49
SSH3-202ENST00000308298 PTMSP20962 102 aa24.34■■□□□ 1.49
SSH3-202ENST00000308298 UPF3BQ9BZI7 483 aaKnown RBP24.34■■□□□ 1.49
SSH3-202ENST00000308298 DBNLQ9UJU6 430 aaKnown RBP24.34■■□□□ 1.49
SSH3-202ENST00000308298 DOT1LQ8TEK3 1739 aa24.34■■□□□ 1.49
SSH3-202ENST00000308298 CYP2E1P05181 493 aaPredicted RBP24.34■■□□□ 1.49
SSH3-202ENST00000308298 TCIRG1Q13488 830 aa24.34■■□□□ 1.49
SSH3-202ENST00000308298 CUL4AQ13619 759 aa24.33■■□□□ 1.49
SSH3-202ENST00000308298 KIF6Q6ZMV9 814 aa24.33■■□□□ 1.49
SSH3-202ENST00000308298 ZNF330Q9Y3S2 320 aaPredicted RBP24.33■■□□□ 1.49
SSH3-202ENST00000308298 ATP5JP18859 108 aa24.32■■□□□ 1.48
SSH3-202ENST00000308298 FSD1Q9BTV5 496 aa24.32■■□□□ 1.48
SSH3-202ENST00000308298 PTH1RQ03431 593 aa24.31■■□□□ 1.48
SSH3-202ENST00000308298 TRIM28Q13263 835 aaKnown RBP24.31■■□□□ 1.48
SSH3-202ENST00000308298 NMIQ13287 307 aaPredicted RBP24.31■■□□□ 1.48
SSH3-202ENST00000308298 RASEFQ8IZ41 740 aa24.3■■□□□ 1.48
SSH3-202ENST00000308298 SNRKQ9NRH2 765 aa24.3■■□□□ 1.48
SSH3-202ENST00000308298 CCDC171Q6TFL3 1326 aa24.3■■□□□ 1.48
SSH3-202ENST00000308298 ANKRD36CQ5JPF3 1778 aa24.3■■□□□ 1.48
SSH3-202ENST00000308298 FAM227BQ96M60 508 aa24.3■■□□□ 1.48
SSH3-202ENST00000308298 CDCA7Q9BWT1 371 aaPredicted RBP24.3■■□□□ 1.48
SSH3-202ENST00000308298 ATG9AQ7Z3C6 839 aa24.29■■□□□ 1.48
SSH3-202ENST00000308298 INTS4Q96HW7 963 aaKnown RBP24.29■■□□□ 1.48
SSH3-202ENST00000308298 BAG4O95429 457 aaKnown RBP24.28■■□□□ 1.48
SSH3-202ENST00000308298 DBNDD2Q9BQY9 259 aa24.28■■□□□ 1.48
SSH3-202ENST00000308298 MAP3K15Q6ZN16 1313 aa24.28■■□□□ 1.48
SSH3-202ENST00000308298 GOLGA6L22H0YM25 854 aa24.28■■□□□ 1.48
SSH3-202ENST00000308298 IL15P40933 162 aaPredicted RBP24.28■■□□□ 1.48
SSH3-202ENST00000308298 PKP1Q13835 747 aa24.28■■□□□ 1.48
SSH3-202ENST00000308298 NOL8Q76FK4 1167 aaKnown RBP24.28■■□□□ 1.48
SSH3-202ENST00000308298 GPR108Q9NPR9 543 aa24.28■■□□□ 1.48
SSH3-202ENST00000308298 ADAMTS2O95450 1211 aa24.27■■□□□ 1.48
SSH3-202ENST00000308298 CYP19A1P11511 503 aaPredicted RBP24.27■■□□□ 1.48
SSH3-202ENST00000308298 KCNB2Q92953 911 aa24.27■■□□□ 1.48
SSH3-202ENST00000308298 SLC4A9Q96Q91 983 aa24.27■■□□□ 1.48
SSH3-202ENST00000308298 RFX7Q2KHR2 1363 aa24.27■■□□□ 1.48
SSH3-202ENST00000308298 SYTL4Q96C24 671 aaPredicted RBP24.27■■□□□ 1.48
SSH3-202ENST00000308298 TTC14Q96N46 770 aa24.27■■□□□ 1.48
SSH3-202ENST00000308298 THRAP3Q9Y2W1 955 aaKnown RBP24.27■■□□□ 1.48
SSH3-202ENST00000308298 SPATA31A1Q5TZJ5 1347 aa24.27■■□□□ 1.47
SSH3-202ENST00000308298 MED23Q9ULK4 1368 aa24.26■■□□□ 1.47
SSH3-202ENST00000308298 A0A0D9SFI3 127 aa24.26■■□□□ 1.47
SSH3-202ENST00000308298 PCCAP05165 728 aaPredicted RBP24.26■■□□□ 1.47
SSH3-202ENST00000308298 SKOR2Q2VWA4 1001 aaPredicted RBP24.26■■□□□ 1.47
SSH3-202ENST00000308298 EYA2O00167 538 aa24.25■■□□□ 1.47
SSH3-202ENST00000308298 CIAO1O76071 339 aa24.25■■□□□ 1.47
SSH3-202ENST00000308298 PRPF40BQ6NWY9 871 aaKnown RBP24.25■■□□□ 1.47
SSH3-202ENST00000308298 GIGYF2Q6Y7W6 1299 aaKnown RBP24.25■■□□□ 1.47
SSH3-202ENST00000308298 NECTIN1Q15223 517 aa24.25■■□□□ 1.47
SSH3-202ENST00000308298 MAP4K1Q92918 833 aa24.25■■□□□ 1.47
SSH3-202ENST00000308298 HAUS7Q99871 368 aa24.25■■□□□ 1.47
SSH3-202ENST00000308298 NWD2Q9ULI1 1742 aa24.25■■□□□ 1.47
SSH3-202ENST00000308298 NUP98P52948 1817 aa24.24■■□□□ 1.47
SSH3-202ENST00000308298 ZNF609O15014 1411 aa24.24■■□□□ 1.47
SSH3-202ENST00000308298 EDC3Q96F86 508 aaKnown RBP24.24■■□□□ 1.47
SSH3-202ENST00000308298 GZF1Q9H116 711 aaPredicted RBP24.24■■□□□ 1.47
SSH3-202ENST00000308298 RBM8AQ9Y5S9 174 aaKnown RBP24.24■■□□□ 1.47
SSH3-202ENST00000308298 PRIM1P49642 420 aaKnown RBP24.23■■□□□ 1.47
SSH3-202ENST00000308298 ZNF594Q96JF6 807 aaPredicted RBP24.23■■□□□ 1.47
SSH3-202ENST00000308298 ARXQ96QS3 562 aa24.23■■□□□ 1.47
SSH3-202ENST00000308298 PLA2G12BQ9BX93 195 aa24.23■■□□□ 1.47
SSH3-202ENST00000308298 TM6SF1Q9BZW5 370 aa24.23■■□□□ 1.47
SSH3-202ENST00000308298 ZDHHC9Q9Y397 364 aa24.23■■□□□ 1.47
SSH3-202ENST00000308298 CASTP20810 708 aaKnown RBP24.23■■□□□ 1.47
SSH3-202ENST00000308298 LRRC24Q50LG9 513 aa24.23■■□□□ 1.47
SSH3-202ENST00000308298 ZBTB38Q8NAP3 1195 aaPredicted RBP24.23■■□□□ 1.47
SSH3-202ENST00000308298 JCADQ9P266 1359 aa24.22■■□□□ 1.47
SSH3-202ENST00000308298 DDB1Q16531 1140 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms