RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 UVSSAQ2YD98 709 aa19.78■□□□□ 0.76
SSH3-201ENST00000308127 VPS53Q5VIR6 699 aa19.78■□□□□ 0.76
SSH3-201ENST00000308127 RUFY2Q8WXA3 655 aa19.78■□□□□ 0.76
SSH3-201ENST00000308127 A0A087WWV3 80 aa19.78■□□□□ 0.76
SSH3-201ENST00000308127 MYL6BP14649 208 aa19.78■□□□□ 0.76
SSH3-201ENST00000308127 PTGS1P23219 599 aa19.78■□□□□ 0.76
SSH3-201ENST00000308127 NECTIN1Q15223 517 aa19.78■□□□□ 0.76
SSH3-201ENST00000308127 LARP1Q6PKG0 1096 aaKnown RBP19.78■□□□□ 0.76
SSH3-201ENST00000308127 ATP6V1DQ9Y5K8 247 aa19.78■□□□□ 0.76
SSH3-201ENST00000308127 LRMPQ12912 555 aa19.77■□□□□ 0.76
SSH3-201ENST00000308127 SLC27A2O14975 620 aa19.77■□□□□ 0.76
SSH3-201ENST00000308127 JAK2O60674 1132 aa19.77■□□□□ 0.76
SSH3-201ENST00000308127 SLC39A6Q13433 755 aa19.77■□□□□ 0.76
SSH3-201ENST00000308127 DACT1Q9NYF0 836 aa19.77■□□□□ 0.76
SSH3-201ENST00000308127 NRBP1Q9UHY1 535 aa19.77■□□□□ 0.76
SSH3-201ENST00000308127 KAZALD1Q96I82 304 aa19.77■□□□□ 0.75
SSH3-201ENST00000308127 CCDC129Q6ZRS4 1044 aa19.76■□□□□ 0.75
SSH3-201ENST00000308127 DIP2AQ14689 1571 aa19.76■□□□□ 0.75
SSH3-201ENST00000308127 TTC41PQ6P2S7 1318 aa19.76■□□□□ 0.75
SSH3-201ENST00000308127 CBX1P83916 185 aa19.76■□□□□ 0.75
SSH3-201ENST00000308127 SLFNL1Q499Z3 407 aa19.76■□□□□ 0.75
SSH3-201ENST00000308127 HSP90AB4PQ58FF6 505 aa19.76■□□□□ 0.75
SSH3-201ENST00000308127 DRC7Q8IY82 874 aa19.75■□□□□ 0.75
SSH3-201ENST00000308127 G3BP1Q13283 466 aaKnown RBP eCLIP19.74■□□□□ 0.75
SSH3-201ENST00000308127 FBXW7Q969H0 707 aa19.74■□□□□ 0.75
SSH3-201ENST00000308127 GPATCH3Q96I76 525 aa19.74■□□□□ 0.75
SSH3-201ENST00000308127 DBF4Q9UBU7 674 aaPredicted RBP19.74■□□□□ 0.75
SSH3-201ENST00000308127 GOLGA6L4A6NEF3 574 aa19.74■□□□□ 0.75
SSH3-201ENST00000308127 SPDYE4A6NLX3 237 aa19.74■□□□□ 0.75
SSH3-201ENST00000308127 CCDC192P0DO97 292 aa19.74■□□□□ 0.75
SSH3-201ENST00000308127 ANO6Q4KMQ2 910 aa19.74■□□□□ 0.75
SSH3-201ENST00000308127 EVI5LQ96CN4 794 aa19.74■□□□□ 0.75
SSH3-201ENST00000308127 SEC62Q99442 399 aaKnown RBP19.74■□□□□ 0.75
SSH3-201ENST00000308127 NUP62CLQ9H1M0 184 aa19.74■□□□□ 0.75
SSH3-201ENST00000308127 LRRC37A3O60309 1634 aa19.74■□□□□ 0.75
SSH3-201ENST00000308127 KRT85P78386 507 aa19.73■□□□□ 0.75
SSH3-201ENST00000308127 TYRO3Q06418 890 aa19.73■□□□□ 0.75
SSH3-201ENST00000308127 ESCO1Q5FWF5 840 aa19.73■□□□□ 0.75
SSH3-201ENST00000308127 BLOC1S2Q6QNY1 142 aa19.73■□□□□ 0.75
SSH3-201ENST00000308127 PXDNLA1KZ92 1463 aa19.73■□□□□ 0.75
SSH3-201ENST00000308127 CEMIPQ8WUJ3 1361 aa19.73■□□□□ 0.75
SSH3-201ENST00000308127 LETM1O95202 739 aaPredicted RBP19.73■□□□□ 0.75
SSH3-201ENST00000308127 MRVI1Q9Y6F6 885 aa19.73■□□□□ 0.75
SSH3-201ENST00000308127 EPHA10Q5JZY3 1008 aa19.73■□□□□ 0.75
SSH3-201ENST00000308127 PHF8Q9UPP1 1060 aa19.73■□□□□ 0.75
SSH3-201ENST00000308127 MAP3K11Q16584 847 aa19.72■□□□□ 0.75
SSH3-201ENST00000308127 IP6K1Q92551 441 aa19.72■□□□□ 0.75
SSH3-201ENST00000308127 SH2B1Q9NRF2 756 aaPredicted RBP19.72■□□□□ 0.75
SSH3-201ENST00000308127 ZHX1Q9UKY1 873 aaPredicted RBP19.72■□□□□ 0.75
SSH3-201ENST00000308127 RIOK3O14730 519 aaKnown RBP19.72■□□□□ 0.75
SSH3-201ENST00000308127 GIGYF1O75420 1035 aaPredicted RBP19.72■□□□□ 0.75
SSH3-201ENST00000308127 PSME1Q06323 249 aa19.72■□□□□ 0.75
SSH3-201ENST00000308127 KSR2Q6VAB6 950 aa19.72■□□□□ 0.75
SSH3-201ENST00000308127 CCDC186Q7Z3E2 898 aa19.72■□□□□ 0.75
SSH3-201ENST00000308127 KIAA1524Q8TCG1 905 aa19.72■□□□□ 0.75
SSH3-201ENST00000308127 MAP4K1Q92918 833 aa19.72■□□□□ 0.75
SSH3-201ENST00000308127 SPATA32Q96LK8 384 aa19.72■□□□□ 0.75
SSH3-201ENST00000308127 MAP7D2Q96T17 732 aa19.72■□□□□ 0.75
SSH3-201ENST00000308127 FTOQ9C0B1 505 aaKnown RBP eCLIP19.72■□□□□ 0.75
SSH3-201ENST00000308127 TNMDQ9H2S6 317 aa19.72■□□□□ 0.75
SSH3-201ENST00000308127 BCL2L12Q9HB09 334 aa19.72■□□□□ 0.75
SSH3-201ENST00000308127 TOB2Q14106 344 aaPredicted RBP19.71■□□□□ 0.75
SSH3-201ENST00000308127 C1orf141Q5JVX7 400 aa19.71■□□□□ 0.75
SSH3-201ENST00000308127 BICD2Q8TD16 824 aa19.71■□□□□ 0.75
SSH3-201ENST00000308127 ZSCAN31Q96LW9 406 aaPredicted RBP19.71■□□□□ 0.75
SSH3-201ENST00000308127 TAOK2Q9UL54 1235 aa19.71■□□□□ 0.75
SSH3-201ENST00000308127 TBX22Q9Y458 520 aa19.71■□□□□ 0.75
SSH3-201ENST00000308127 GRM8O00222 908 aa19.71■□□□□ 0.75
SSH3-201ENST00000308127 NR1I2O75469 434 aa19.71■□□□□ 0.75
SSH3-201ENST00000308127 DNAJC2Q99543 621 aaKnown RBP19.71■□□□□ 0.75
SSH3-201ENST00000308127 ERCC4Q92889 916 aaPredicted RBP19.7■□□□□ 0.74
SSH3-201ENST00000308127 C16orf45Q96MC5 204 aaPredicted RBP19.7■□□□□ 0.74
SSH3-201ENST00000308127 DNAJC25Q9H1X3 360 aa19.7■□□□□ 0.74
SSH3-201ENST00000308127 CBX8Q9HC52 389 aa19.7■□□□□ 0.74
SSH3-201ENST00000308127 KIF3AQ9Y496 699 aa19.7■□□□□ 0.74
SSH3-201ENST00000308127 RNMTO43148 476 aaKnown RBP19.7■□□□□ 0.74
SSH3-201ENST00000308127 HSP90B1P14625 803 aaKnown RBP19.7■□□□□ 0.74
SSH3-201ENST00000308127 PPP4R3BQ5MIZ7 849 aa19.7■□□□□ 0.74
SSH3-201ENST00000308127 RIC3Q7Z5B4 369 aa19.7■□□□□ 0.74
SSH3-201ENST00000308127 NAP1L2Q9ULW6 460 aaPredicted RBP19.7■□□□□ 0.74
SSH3-201ENST00000308127 PXDNQ92626 1479 aa19.7■□□□□ 0.74
SSH3-201ENST00000308127 EPB41L2O43491 1005 aaKnown RBP19.69■□□□□ 0.74
SSH3-201ENST00000308127 USP42Q9H9J4 1324 aaKnown RBP19.69■□□□□ 0.74
SSH3-201ENST00000308127 IGSF3O75054 1194 aa19.69■□□□□ 0.74
SSH3-201ENST00000308127 ATP2B3Q16720 1220 aa19.69■□□□□ 0.74
SSH3-201ENST00000308127 TRIM5Q9C035 493 aa19.69■□□□□ 0.74
SSH3-201ENST00000308127 NAA30Q147X3 362 aaPredicted RBP19.69■□□□□ 0.74
SSH3-201ENST00000308127 FAM200AQ8TCP9 573 aa19.69■□□□□ 0.74
SSH3-201ENST00000308127 AKAP4Q5JQC9 854 aa19.68■□□□□ 0.74
SSH3-201ENST00000308127 BABAM1Q9NWV8 329 aa19.68■□□□□ 0.74
SSH3-201ENST00000308127 IGKV5-2P06315 115 aa19.68■□□□□ 0.74
SSH3-201ENST00000308127 PGBD1Q96JS3 809 aa19.68■□□□□ 0.74
SSH3-201ENST00000308127 TM6SF1Q9BZW5 370 aa19.68■□□□□ 0.74
SSH3-201ENST00000308127 SPTLC3Q9NUV7 552 aa19.68■□□□□ 0.74
SSH3-201ENST00000308127 RPS6KB1P23443 525 aa19.67■□□□□ 0.74
SSH3-201ENST00000308127 MTX1Q13505 466 aa19.67■□□□□ 0.74
SSH3-201ENST00000308127 PLEKHO1Q53GL0 409 aaPredicted RBP19.67■□□□□ 0.74
SSH3-201ENST00000308127 LEO1Q8WVC0 666 aaPredicted RBP19.67■□□□□ 0.74
SSH3-201ENST00000308127 MYD88Q99836 296 aa19.67■□□□□ 0.74
SSH3-201ENST00000308127 CACNA1FO60840 1977 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms