RNA–Protein interactions for RNA: ENST00000308008.10

RAPGEF6-202, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-202ENST00000308008 CCDC181Q5TID7 509 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 TSHZ1Q6ZSZ6 1077 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 MTERF4Q7Z6M4 381 aaKnown RBP3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 MPNDQ8N594 471 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 NPC1L1Q9UHC9 1359 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 NINLQ9Y2I6 1382 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 ZNF521Q96K83 1311 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 PPP1R12AO14974 1030 aaPredicted RBP3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 FAM193AP78312 1265 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 ARID5AQ03989 594 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 CCDC173Q0VFZ6 552 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 PSMD2Q13200 908 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 EGFLAMQ63HQ2 1017 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 SLC4A10Q6U841 1118 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 SPIRE2Q8WWL2 714 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 TNPO1Q92973 898 aaKnown RBP3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 RNF34Q969K3 372 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 RNF19AQ9NV58 838 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 ATP9BO43861 1147 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 FMNL1O95466 1100 aaPredicted RBP3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 FAM163BP0C2L3 166 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 DNTTIP2Q5QJE6 756 aaKnown RBP3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 PDILTQ8N807 584 aa3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 SRPK1Q96SB4 655 aaKnown RBP3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 NAP1L4Q99733 375 aaKnown RBP3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 NSFL1CQ9UNZ2 370 aaKnown RBP3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 INO80Q9ULG1 1556 aaPredicted RBP3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 TNS1Q9HBL0 1735 aaKnown RBP3.93□□□□□ -1.78
RAPGEF6-202ENST00000308008 DYTNA2CJ06 578 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 DHX16O60231 1041 aaKnown RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 ZNF76P36508 570 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 KCNH2Q12809 1159 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 RGL3Q3MIN7 710 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 CREBRFQ8IUR6 639 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 TRMT2AQ8IZ69 625 aaKnown RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.92□□□□□ -1.789e-7■■■□□ 16.8
RAPGEF6-202ENST00000308008 SEPT3Q9UH03 358 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 ISY1Q9ULR0 285 aaKnown RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 GPATCH8Q9UKJ3 1502 aaKnown RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 CLGNO14967 610 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 RBM6P78332 1123 aaKnown RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 EIF4G2P78344 907 aaKnown RBP eCLIP3.92□□□□□ -1.784e-9■■■■■ 36.4
RAPGEF6-202ENST00000308008 TSR2Q969E8 191 aaKnown RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 PCDH12Q9NPG4 1184 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 MAGEC2Q9UBF1 373 aaPredicted RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 DDX41Q9UJV9 622 aaKnown RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 MRVI1Q9Y6F6 885 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 MORC2Q9Y6X9 1032 aaPredicted RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 BLMP54132 1417 aaPredicted RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 PTPRGP23470 1445 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L5A8MUK1 530 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 G3V3G9 751 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 DNAJC6O75061 913 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 RHBDL3P58872 404 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 NCBP1Q09161 790 aaKnown RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 TAF3Q5VWG9 929 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 JPH4Q96JJ6 628 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 OSBPL2Q9H1P3 480 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 ALG2Q9H553 416 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 SPTLC3Q9NUV7 552 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 SORBS3O60504 671 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 ZNF445P59923 1031 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 HMGN5P82970 282 aaKnown RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 RAD51AP2Q09MP3 1159 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 DPYDQ12882 1025 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 NCOA4Q13772 614 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 ZNF394Q53GI3 561 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 CENPQQ7L2Z9 268 aaPredicted RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 SMC5Q8IY18 1101 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 PNMA1Q8ND90 353 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 NGLY1Q96IV0 654 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 CHAMP1Q96JM3 812 aa3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 DUSP9Q99956 384 aaKnown RBP3.92□□□□□ -1.78
RAPGEF6-202ENST00000308008 MBD5Q9P267 1494 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 LRRIQ1Q96JM4 1722 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 AP5Z1O43299 807 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 PRC1O43663 620 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 PPFIA4O75335 1185 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 YY1P25490 414 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 HNRNPH2P55795 449 aaKnown RBP3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 GSCP56915 257 aaPredicted RBP3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 GUCA2AQ02747 115 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 RAB3GAP1Q15042 981 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 ZNF579Q8NAF0 562 aaKnown RBP3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 IRF2BPLQ9H1B7 796 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 SPC25Q9HBM1 224 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 POLKQ9UBT6 870 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 PHLPP1O60346 1717 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L15C9J2P7 530 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L10C9JJH3 530 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L13C9JLJ4 530 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L12C9JPN9 530 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L11C9JVI0 530 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L21D6R901 530 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L18D6R9N7 530 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L22D6RA61 530 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L17D6RBQ6 530 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L19D6RCP7 530 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L20D6RJB6 530 aa3.91□□□□□ -1.78
RAPGEF6-202ENST00000308008 C6orf229H3BNL8 230 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms