RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ANKLE2Q86XL3 938 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 VTI1AQ96AJ9 217 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 GDAP1L1Q96MZ0 367 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 UGGT1Q9NYU2 1555 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 KIAA0232Q92628 1395 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 CCDC181Q5TID7 509 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 CEP112Q8N8E3 955 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 ATP2A1O14983 1001 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 FOXP2O15409 715 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 EVA1CP58658 441 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 SLFN5Q08AF3 891 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 TMEM266Q2M3C6 531 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 BCAP29Q9UHQ4 241 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 PPP2R1AP30153 589 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 TMCO3Q6UWJ1 677 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 NUP62CLQ9H1M0 184 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 TCP11L2Q8N4U5 519 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 SYCP2Q9BX26 1530 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 FKBP15Q5T1M5 1219 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 DDX46Q7L014 1031 aaKnown RBP4.63□□□□□ -1.67
USH2A-201ENST00000307340 RILPL2Q969X0 211 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 SCP2P22307 547 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 RBM33Q96EV2 1170 aaKnown RBP4.63□□□□□ -1.67
USH2A-201ENST00000307340 MAP3K4Q9Y6R4 1608 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 KRT83P78385 493 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 ARHGAP29Q52LW3 1261 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 PPP4R3AQ6IN85 833 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 UPF3BQ9BZI7 483 aaKnown RBP4.63□□□□□ -1.67
USH2A-201ENST00000307340 KRT23Q9C075 422 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 DAAM1Q9Y4D1 1078 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 BUB1BO60566 1050 aaPredicted RBP4.63□□□□□ -1.67
USH2A-201ENST00000307340 TRIM37O94972 964 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 CLCN1P35523 988 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 SEC63Q9UGP8 760 aaKnown RBP4.63□□□□□ -1.67
USH2A-201ENST00000307340 A0A1B0GUA9 196 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 LZTS2Q9BRK4 669 aa4.63□□□□□ -1.67
USH2A-201ENST00000307340 NUP153P49790 1475 aaKnown RBP4.63□□□□□ -1.67
USH2A-201ENST00000307340 ANKRD26Q9UPS8 1709 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 NSD3Q9BZ95 1437 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 ARID3CA6NKF2 412 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 PAFAH1B1P43034 410 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 GALNT17Q6IS24 598 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 NFXL1Q6ZNB6 911 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 B4GALNT4Q76KP1 1039 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 SPATA32Q96LK8 384 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 CAVIN4Q5BKX8 364 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 CFAP57Q96MR6 1250 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 LIMCH1Q9UPQ0 1083 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 DIP2AQ14689 1571 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 PAK3O75914 559 aaPredicted RBP4.62□□□□□ -1.67
USH2A-201ENST00000307340 IRX4P78413 519 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 CCDC110Q8TBZ0 833 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 SUDS3Q9H7L9 328 aaPredicted RBP4.62□□□□□ -1.67
USH2A-201ENST00000307340 C6orf163Q5TEZ5 329 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 MAP3K12Q12852 859 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 CADPS2Q86UW7 1296 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 EDEM3Q9BZQ6 932 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 BAG3O95817 575 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 PPFIA1Q13136 1202 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 SLC4A10Q6U841 1118 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.62□□□□□ -1.67
USH2A-201ENST00000307340 FAM135BQ49AJ0 1406 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 TSG101Q99816 390 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 GOLGA8QA0A0J9YX86 632 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 GOLGA8OA6NCC3 632 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 GOLGA8NF8WBI6 632 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 ATP8B1O43520 1251 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 ILF2Q12905 390 aaKnown RBP4.62□□□□□ -1.67
USH2A-201ENST00000307340 CCDC14Q49A88 953 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 KIAA1328Q86T90 577 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 NCAPD2Q15021 1401 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 CCDC69A6NI79 296 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 HOOK2Q96ED9 719 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 TAF7Q15545 349 aaPredicted RBP4.62□□□□□ -1.67
USH2A-201ENST00000307340 SELENOOQ9BVL4 669 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 NPATQ14207 1427 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 RIC3Q7Z5B4 369 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 CCDC84Q86UT8 332 aaPredicted RBP4.62□□□□□ -1.67
USH2A-201ENST00000307340 C14orf93Q9H972 538 aaKnown RBP4.62□□□□□ -1.67
USH2A-201ENST00000307340 RASAL2Q9UJF2 1139 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 ARID3AQ99856 593 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 CENPHQ9H3R5 247 aa4.62□□□□□ -1.67
USH2A-201ENST00000307340 CCDC175P0C221 793 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 RASSF4Q9H2L5 321 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 TCP11L1Q9NUJ3 509 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 KRT86O43790 486 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 TATP17735 454 aaPredicted RBP4.61□□□□□ -1.67
USH2A-201ENST00000307340 LARP1BQ659C4 914 aaKnown RBP4.61□□□□□ -1.67
USH2A-201ENST00000307340 QRICH2Q9H0J4 1663 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 SERPINC1P01008 464 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 LDHCP07864 332 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 STX1AQ16623 288 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 GRIPAP1Q4V328 841 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 ZNF526Q8TF50 670 aaPredicted RBP4.61□□□□□ -1.67
USH2A-201ENST00000307340 DYDC1Q8WWB3 177 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 NSRP1Q9H0G5 558 aaKnown RBP4.61□□□□□ -1.67
USH2A-201ENST00000307340 CSRNP2Q9H175 543 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 CDK12Q9NYV4 1490 aaPredicted RBP4.61□□□□□ -1.67
USH2A-201ENST00000307340 PHLPP2Q6ZVD8 1323 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 EXOC8Q8IYI6 725 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms