RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 LETM1O95202 739 aaPredicted RBP12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 TRIM27P14373 513 aa12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 HAND2P61296 217 aa12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 DACH1Q9UI36 760 aa12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 DNAI2Q9GZS0 605 aa12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 TMEM67Q5HYA8 995 aa12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 ANKRD2Q9GZV1 360 aa12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 LTKP29376 864 aa12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 KIF5BP33176 963 aa12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 STX8Q9UNK0 236 aa12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 TRPC5Q9UL62 973 aaPredicted RBP12.51□□□□□ -0.41
SYNPO2-201ENST00000307142 GOLGA8AA7E2F4 631 aa12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 GOLGA8BA8MQT2 603 aa12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 TNNI2P48788 182 aa12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 HMGB1P09429 215 aaKnown RBP12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 HELBQ8NG08 1087 aaPredicted RBP12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 BEGAINQ9BUH8 593 aa12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 KRT85P78386 507 aa12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 CAGE1Q8TC20 777 aa12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 SLC4A4Q9Y6R1 1079 aa12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 CFAP45Q9UL16 551 aa12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 WDR33Q9C0J8 1336 aaKnown RBP12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 BAG4O95429 457 aaKnown RBP12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 UBA5Q9GZZ9 404 aa12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 TMEM266Q2M3C6 531 aa12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
SYNPO2-201ENST00000307142 EAPPQ56P03 285 aaPredicted RBP12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 ECHDC1Q9NTX5 307 aa12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 HECW2Q9P2P5 1572 aa12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 NPHP4O75161 1426 aaPredicted RBP12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 ZFYVE9O95405 1425 aa12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 K7ELQ4 463 aaPredicted RBP12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 DESP17661 470 aa12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 SPATA32Q96LK8 384 aa12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 IL16Q14005 1332 aa12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 SERPINC1P01008 464 aa12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 ZNHIT6Q9NWK9 470 aaKnown RBP12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 UFL1O94874 794 aa12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 CAVIN1Q6NZI2 390 aaKnown RBP12.49□□□□□ -0.41
SYNPO2-201ENST00000307142 MAGEB6P1A0A0J9YX57 407 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 GUCY1B3Q02153 619 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 CCDC83Q8IWF9 413 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 DEF6Q9H4E7 631 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 CCT2P78371 535 aaKnown RBP12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 DRC1Q96MC2 740 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 RAB34Q9BZG1 259 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 TRIM5Q9C035 493 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 CCDC194A0A1B0GVG4 234 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 CCDC24Q8N4L8 307 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 TNMDQ9H2S6 317 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 TSHZ3Q63HK5 1081 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 CCDC12Q8WUD4 166 aaPredicted RBP12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 EDC4Q6P2E9 1401 aaKnown RBP12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 NEBLO76041 1014 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 KDM5DQ9BY66 1539 aa12.48□□□□□ -0.41
SYNPO2-201ENST00000307142 LDHBP07195 334 aaKnown RBP12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 LARGE2Q8N3Y3 721 aa12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 EFCAB6Q5THR3 1501 aa12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 TMEM94Q12767 1356 aa12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 RNF214Q8ND24 703 aa12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 C8orf58Q8NAV2 365 aa12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 BCS1LQ9Y276 419 aa12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 KDM5AP29375 1690 aaKnown RBP12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 ZNF790Q6PG37 636 aa12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 C8orf76Q96K31 380 aa12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 CCDC39Q9UFE4 941 aa12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 SBNO1A3KN83 1393 aa12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 TRIM37O94972 964 aa12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 CKAP2LQ8IYA6 745 aa12.47□□□□□ -0.41
SYNPO2-201ENST00000307142 PPP1R12BO60237 982 aaPredicted RBP12.46□□□□□ -0.41
SYNPO2-201ENST00000307142 IL15P40933 162 aaPredicted RBP12.46□□□□□ -0.41
SYNPO2-201ENST00000307142 CWF19L2Q2TBE0 894 aaKnown RBP12.46□□□□□ -0.41
SYNPO2-201ENST00000307142 IFIT1BQ5T764 474 aaKnown RBP12.46□□□□□ -0.41
SYNPO2-201ENST00000307142 HCLS1P14317 486 aaPredicted RBP12.46□□□□□ -0.41
SYNPO2-201ENST00000307142 DPP8Q6V1X1 898 aaPredicted RBP12.46□□□□□ -0.41
SYNPO2-201ENST00000307142 MAGEB6Q8N7X4 407 aa12.46□□□□□ -0.42
SYNPO2-201ENST00000307142 PICK1Q9NRD5 415 aa12.46□□□□□ -0.42
SYNPO2-201ENST00000307142 PPP4R3BQ5MIZ7 849 aa12.46□□□□□ -0.42
SYNPO2-201ENST00000307142 ARHGAP27Q6ZUM4 889 aa12.46□□□□□ -0.42
SYNPO2-201ENST00000307142 CCDC150Q8NCX0 1101 aa12.45□□□□□ -0.42
SYNPO2-201ENST00000307142 GGA1Q9UJY5 639 aa12.45□□□□□ -0.42
SYNPO2-201ENST00000307142 FAM89AQ96GI7 184 aa12.45□□□□□ -0.42
SYNPO2-201ENST00000307142 TTC37Q6PGP7 1564 aa12.45□□□□□ -0.42
SYNPO2-201ENST00000307142 C20orf194Q5TEA3 1177 aa12.45□□□□□ -0.42
SYNPO2-201ENST00000307142 ALDH1L1O75891 902 aa12.45□□□□□ -0.42
SYNPO2-201ENST00000307142 PLCG2P16885 1265 aa12.45□□□□□ -0.42
SYNPO2-201ENST00000307142 PPFIBP1Q86W92 1011 aa12.45□□□□□ -0.42
SYNPO2-201ENST00000307142 MICU3Q86XE3 530 aa12.45□□□□□ -0.42
SYNPO2-201ENST00000307142 NCOA7Q8NI08 942 aa12.45□□□□□ -0.42
SYNPO2-201ENST00000307142 RAB11FIP4Q86YS3 637 aa12.45□□□□□ -0.42
SYNPO2-201ENST00000307142 SLC52A2Q9HAB3 445 aa12.45□□□□□ -0.42
SYNPO2-201ENST00000307142 PPM1FP49593 454 aaPredicted RBP12.44□□□□□ -0.42
SYNPO2-201ENST00000307142 GPS2Q13227 327 aa12.44□□□□□ -0.42
SYNPO2-201ENST00000307142 NOM1Q5C9Z4 860 aaKnown RBP12.44□□□□□ -0.42
SYNPO2-201ENST00000307142 RUFY1Q96T51 708 aa12.44□□□□□ -0.42
SYNPO2-201ENST00000307142 MEIS3Q99687 375 aa12.44□□□□□ -0.42
SYNPO2-201ENST00000307142 TSPY26PQ9H489 355 aa12.44□□□□□ -0.42
SYNPO2-201ENST00000307142 KDM5CP41229 1560 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms