RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 RPGRQ92834 1020 aaKnown RBP21.72■■□□□ 1.07
TRAPPC1-201ENST00000303731 LAS1LQ9Y4W2 734 aaKnown RBP21.72■■□□□ 1.07
TRAPPC1-201ENST00000303731 PROSER3Q2NL68 480 aa21.7■■□□□ 1.06
TRAPPC1-201ENST00000303731 RBM17Q96I25 401 aaKnown RBP21.7■■□□□ 1.06
TRAPPC1-201ENST00000303731 UTP14AQ9BVJ6 771 aaKnown RBP21.7■■□□□ 1.06
TRAPPC1-201ENST00000303731 HDGFL1Q5TGJ6 251 aa21.69■■□□□ 1.06
TRAPPC1-201ENST00000303731 COPS6Q7L5N1 327 aa21.69■■□□□ 1.06
TRAPPC1-201ENST00000303731 CRAMP1Q96RY5 1269 aa21.69■■□□□ 1.06
TRAPPC1-201ENST00000303731 PSMD1Q99460 953 aa21.69■■□□□ 1.06
TRAPPC1-201ENST00000303731 ANXA1P04083 346 aa21.68■■□□□ 1.06
TRAPPC1-201ENST00000303731 XAGE3Q8WTP9 111 aa21.68■■□□□ 1.06
TRAPPC1-201ENST00000303731 NLRP3Q96P20 1036 aa21.68■■□□□ 1.06
TRAPPC1-201ENST00000303731 DBF4Q9UBU7 674 aaPredicted RBP21.68■■□□□ 1.06
TRAPPC1-201ENST00000303731 SLC10A5Q5PT55 438 aa21.67■■□□□ 1.06
TRAPPC1-201ENST00000303731 NECTIN2Q92692 538 aa21.67■■□□□ 1.06
TRAPPC1-201ENST00000303731 SCN4AP35499 1836 aa21.66■■□□□ 1.06
TRAPPC1-201ENST00000303731 IQCA1LA6NCM1 817 aa21.66■■□□□ 1.06
TRAPPC1-201ENST00000303731 GNAI1P63096 354 aa21.66■■□□□ 1.06
TRAPPC1-201ENST00000303731 AIMP1Q12904 312 aaKnown RBP21.66■■□□□ 1.06
TRAPPC1-201ENST00000303731 IFT57Q9NWB7 429 aa21.66■■□□□ 1.06
TRAPPC1-201ENST00000303731 CHPF2Q9P2E5 772 aa21.66■■□□□ 1.06
TRAPPC1-201ENST00000303731 SNED1Q8TER0 1413 aa21.65■■□□□ 1.06
TRAPPC1-201ENST00000303731 POTECB2RU33 542 aa21.65■■□□□ 1.06
TRAPPC1-201ENST00000303731 APAF1O14727 1248 aa21.65■■□□□ 1.06
TRAPPC1-201ENST00000303731 IARSP41252 1262 aaKnown RBP21.65■■□□□ 1.06
TRAPPC1-201ENST00000303731 TCIRG1Q13488 830 aa21.65■■□□□ 1.06
TRAPPC1-201ENST00000303731 KRT24Q2M2I5 525 aa21.65■■□□□ 1.06
TRAPPC1-201ENST00000303731 L3MBTL3Q96JM7 780 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC1-201ENST00000303731 CHMP4AQ9BY43 222 aa21.65■■□□□ 1.06
TRAPPC1-201ENST00000303731 TMX4Q9H1E5 349 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC1-201ENST00000303731 ZNF277Q9NRM2 450 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC1-201ENST00000303731 DDNO94850 711 aaPredicted RBP21.64■■□□□ 1.05
TRAPPC1-201ENST00000303731 ZNF853P0CG23 659 aa21.64■■□□□ 1.05
TRAPPC1-201ENST00000303731 NLRP10Q86W26 655 aa21.64■■□□□ 1.05
TRAPPC1-201ENST00000303731 SYNE4Q8N205 404 aa21.64■■□□□ 1.05
TRAPPC1-201ENST00000303731 DNAJC5GQ8N7S2 189 aa21.64■■□□□ 1.05
TRAPPC1-201ENST00000303731 MBIPQ9NS73 344 aa21.64■■□□□ 1.05
TRAPPC1-201ENST00000303731 HYPKQ9NX55 129 aa21.64■■□□□ 1.05
TRAPPC1-201ENST00000303731 PPEF1O14829 653 aaPredicted RBP21.63■■□□□ 1.05
TRAPPC1-201ENST00000303731 DUSP27Q5VZP5 1158 aa21.63■■□□□ 1.05
TRAPPC1-201ENST00000303731 OLFM4Q6UX06 510 aa21.63■■□□□ 1.05
TRAPPC1-201ENST00000303731 PLBD2Q8NHP8 589 aa21.63■■□□□ 1.05
TRAPPC1-201ENST00000303731 ANKRD13DQ6ZTN6 518 aa21.62■■□□□ 1.05
TRAPPC1-201ENST00000303731 JDP2Q8WYK2 163 aa21.62■■□□□ 1.05
TRAPPC1-201ENST00000303731 SH3TC1Q8TE82 1336 aa21.61■■□□□ 1.05
TRAPPC1-201ENST00000303731 TRMT112Q9UI30 125 aaKnown RBP21.61■■□□□ 1.05
TRAPPC1-201ENST00000303731 FZD9O00144 591 aa21.6■■□□□ 1.05
TRAPPC1-201ENST00000303731 LAMB2P55268 1798 aa21.6■■□□□ 1.05
TRAPPC1-201ENST00000303731 C3orf67Q6ZVT6 689 aa21.59■■□□□ 1.05
TRAPPC1-201ENST00000303731 KLRG1Q96E93 195 aa21.59■■□□□ 1.05
TRAPPC1-201ENST00000303731 VPS33BQ9H267 617 aa21.59■■□□□ 1.05
TRAPPC1-201ENST00000303731 BBOX1O75936 387 aa21.58■■□□□ 1.05
TRAPPC1-201ENST00000303731 CHADLQ6NUI6 762 aa21.58■■□□□ 1.05
TRAPPC1-201ENST00000303731 GPC2Q8N158 579 aa21.58■■□□□ 1.05
TRAPPC1-201ENST00000303731 ATP6V0A2Q9Y487 856 aa21.58■■□□□ 1.05
TRAPPC1-201ENST00000303731 ABCC4O15439 1325 aa21.57■■□□□ 1.04
TRAPPC1-201ENST00000303731 ZNF541Q9H0D2 1346 aa21.57■■□□□ 1.04
TRAPPC1-201ENST00000303731 EIF6P56537 245 aaKnown RBP21.57■■□□□ 1.04
TRAPPC1-201ENST00000303731 DDX46Q7L014 1031 aaKnown RBP21.57■■□□□ 1.04
TRAPPC1-201ENST00000303731 ISCA1Q9BUE6 129 aa21.57■■□□□ 1.04
TRAPPC1-201ENST00000303731 GOLGA2Q08379 1002 aa21.56■■□□□ 1.04
TRAPPC1-201ENST00000303731 TRIM28Q13263 835 aaKnown RBP21.56■■□□□ 1.04
TRAPPC1-201ENST00000303731 CCDC27Q2M243 656 aa21.56■■□□□ 1.04
TRAPPC1-201ENST00000303731 TMC4Q7Z404 712 aa21.56■■□□□ 1.04
TRAPPC1-201ENST00000303731 LDHDQ86WU2 507 aa21.56■■□□□ 1.04
TRAPPC1-201ENST00000303731 SUPT20HQ8NEM7 779 aa21.56■■□□□ 1.04
TRAPPC1-201ENST00000303731 TAF1DQ9H5J8 278 aaPredicted RBP21.56■■□□□ 1.04
TRAPPC1-201ENST00000303731 HACL1Q9UJ83 578 aa21.56■■□□□ 1.04
TRAPPC1-201ENST00000303731 HCLS1P14317 486 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC1-201ENST00000303731 NCBP3Q53F19 620 aaKnown RBP21.55■■□□□ 1.04
TRAPPC1-201ENST00000303731 PNMA8AQ86V59 439 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC1-201ENST00000303731 LARGE2Q8N3Y3 721 aa21.55■■□□□ 1.04
TRAPPC1-201ENST00000303731 HSP90B1P14625 803 aaKnown RBP21.54■■□□□ 1.04
TRAPPC1-201ENST00000303731 SP8Q8IXZ3 490 aa21.54■■□□□ 1.04
TRAPPC1-201ENST00000303731 JMYQ8N9B5 988 aa21.54■■□□□ 1.04
TRAPPC1-201ENST00000303731 DDX60Q8IY21 1712 aaKnown RBP21.54■■□□□ 1.04
TRAPPC1-201ENST00000303731 ZNF316A6NFI3 1004 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC1-201ENST00000303731 HTRA3P83110 453 aa21.53■■□□□ 1.04
TRAPPC1-201ENST00000303731 GRAPQ13588 217 aa21.53■■□□□ 1.04
TRAPPC1-201ENST00000303731 CCDC30Q5VVM6 783 aa21.53■■□□□ 1.04
TRAPPC1-201ENST00000303731 RIC3Q7Z5B4 369 aa21.53■■□□□ 1.04
TRAPPC1-201ENST00000303731 GRAPLQ8TC17 118 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC1-201ENST00000303731 RTFDC1Q9BY42 306 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC1-201ENST00000303731 TCERG1O14776 1098 aaKnown RBP21.52■■□□□ 1.04
TRAPPC1-201ENST00000303731 ANP32CO43423 234 aa21.52■■□□□ 1.04
TRAPPC1-201ENST00000303731 NIM1KQ8IY84 436 aa21.52■■□□□ 1.04
TRAPPC1-201ENST00000303731 PPIP5K2O43314 1243 aa21.51■■□□□ 1.03
TRAPPC1-201ENST00000303731 DDX58O95786 925 aaKnown RBP21.51■■□□□ 1.03
TRAPPC1-201ENST00000303731 EPHX2P34913 555 aa21.51■■□□□ 1.03
TRAPPC1-201ENST00000303731 DPP8Q6V1X1 898 aaPredicted RBP21.51■■□□□ 1.03
TRAPPC1-201ENST00000303731 ATP5J2-PTCD1G3V325 749 aa21.5■■□□□ 1.03
TRAPPC1-201ENST00000303731 ELL2O00472 640 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC1-201ENST00000303731 POTEIP0CG38 1075 aa21.5■■□□□ 1.03
TRAPPC1-201ENST00000303731 POTEJP0CG39 1038 aa21.5■■□□□ 1.03
TRAPPC1-201ENST00000303731 LMOD1P29536 600 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC1-201ENST00000303731 SF3B3Q15393 1217 aaKnown RBP21.5■■□□□ 1.03
TRAPPC1-201ENST00000303731 MPNDQ8N594 471 aa21.5■■□□□ 1.03
TRAPPC1-201ENST00000303731 C8orf58Q8NAV2 365 aa21.5■■□□□ 1.03
TRAPPC1-201ENST00000303731 FAM89AQ96GI7 184 aa21.5■■□□□ 1.03
TRAPPC1-201ENST00000303731 COL4A5P29400 1685 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms