RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 GIGYF2Q6Y7W6 1299 aaKnown RBP27.33■■□□□ 1.97
SMAD1-201ENST00000302085 ANP32EQ9BTT0 268 aa27.33■■□□□ 1.97
SMAD1-201ENST00000302085 ATP6V1AP38606 617 aa27.33■■□□□ 1.97
SMAD1-201ENST00000302085 TRIM6-TRIM34B2RNG4 842 aa27.32■■□□□ 1.96
SMAD1-201ENST00000302085 IL6STP40189 918 aaPredicted RBP27.32■■□□□ 1.96
SMAD1-201ENST00000302085 INTS5Q6P9B9 1019 aaKnown RBP27.32■■□□□ 1.96
SMAD1-201ENST00000302085 RILPL2Q969X0 211 aa27.32■■□□□ 1.96
SMAD1-201ENST00000302085 BECN1Q14457 450 aa27.31■■□□□ 1.96
SMAD1-201ENST00000302085 ITPK1Q13572 414 aa27.31■■□□□ 1.96
SMAD1-201ENST00000302085 AACSQ86V21 672 aa27.31■■□□□ 1.96
SMAD1-201ENST00000302085 TTC41PQ6P2S7 1318 aa27.3■■□□□ 1.96
SMAD1-201ENST00000302085 EAF2Q96CJ1 260 aaPredicted RBP27.3■■□□□ 1.96
SMAD1-201ENST00000302085 PALLDQ8WX93 1383 aa27.3■■□□□ 1.96
SMAD1-201ENST00000302085 IFIT2P09913 472 aaKnown RBP27.29■■□□□ 1.96
SMAD1-201ENST00000302085 MEX3CQ5U5Q3 659 aaKnown RBP27.29■■□□□ 1.96
SMAD1-201ENST00000302085 SMARCC1Q92922 1105 aaPredicted RBP27.29■■□□□ 1.96
SMAD1-201ENST00000302085 KIF2CQ99661 725 aa27.29■■□□□ 1.96
SMAD1-201ENST00000302085 USP26Q9BXU7 913 aa27.29■■□□□ 1.96
SMAD1-201ENST00000302085 TBC1D2Q9BYX2 928 aa27.29■■□□□ 1.96
SMAD1-201ENST00000302085 CCDC87Q9NVE4 849 aa27.29■■□□□ 1.96
SMAD1-201ENST00000302085 CHMLP26374 656 aa27.28■■□□□ 1.96
SMAD1-201ENST00000302085 CRKLP46109 303 aaKnown RBP27.28■■□□□ 1.96
SMAD1-201ENST00000302085 EIF5P55010 431 aaKnown RBP27.28■■□□□ 1.96
SMAD1-201ENST00000302085 MYT1Q01538 1121 aa27.28■■□□□ 1.96
SMAD1-201ENST00000302085 ECHDC1Q9NTX5 307 aa27.28■■□□□ 1.96
SMAD1-201ENST00000302085 TBC1D2BQ9UPU7 963 aa27.28■■□□□ 1.96
SMAD1-201ENST00000302085 ERVV-1B6SEH8 477 aa27.27■■□□□ 1.96
SMAD1-201ENST00000302085 ERC2O15083 957 aa27.27■■□□□ 1.96
SMAD1-201ENST00000302085 MAP4K4O95819 1239 aaPredicted RBP27.27■■□□□ 1.96
SMAD1-201ENST00000302085 PCCAP05165 728 aaPredicted RBP27.27■■□□□ 1.96
SMAD1-201ENST00000302085 DZIP3Q86Y13 1208 aaKnown RBP27.27■■□□□ 1.96
SMAD1-201ENST00000302085 CHMP3Q9Y3E7 222 aa27.26■■□□□ 1.95
SMAD1-201ENST00000302085 GLRX3O76003 335 aaKnown RBP27.26■■□□□ 1.95
SMAD1-201ENST00000302085 HSP90AB3PQ58FF7 597 aa27.26■■□□□ 1.95
SMAD1-201ENST00000302085 NLRP10Q86W26 655 aa27.26■■□□□ 1.95
SMAD1-201ENST00000302085 CCDC8Q9H0W5 538 aaPredicted RBP27.26■■□□□ 1.95
SMAD1-201ENST00000302085 GPTP24298 496 aa27.25■■□□□ 1.95
SMAD1-201ENST00000302085 ZBTB38Q8NAP3 1195 aaPredicted RBP27.25■■□□□ 1.95
SMAD1-201ENST00000302085 FAM89AQ96GI7 184 aa27.25■■□□□ 1.95
SMAD1-201ENST00000302085 THSD7AQ9UPZ6 1657 aa27.24■■□□□ 1.95
SMAD1-201ENST00000302085 PTF1AQ7RTS3 328 aa27.24■■□□□ 1.95
SMAD1-201ENST00000302085 GJD4Q96KN9 370 aaPredicted RBP27.24■■□□□ 1.95
SMAD1-201ENST00000302085 ESYT1Q9BSJ8 1104 aa27.24■■□□□ 1.95
SMAD1-201ENST00000302085 AFF2P51816 1311 aa27.24■■□□□ 1.95
SMAD1-201ENST00000302085 TFCP2Q12800 502 aa27.24■■□□□ 1.95
SMAD1-201ENST00000302085 REC8O95072 547 aa27.23■■□□□ 1.95
SMAD1-201ENST00000302085 GPATCH3Q96I76 525 aa27.23■■□□□ 1.95
SMAD1-201ENST00000302085 TLR7Q9NYK1 1049 aaKnown RBP27.23■■□□□ 1.95
SMAD1-201ENST00000302085 CICQ96RK0 1608 aaPredicted RBP27.23■■□□□ 1.95
SMAD1-201ENST00000302085 PLA2G12BQ9BX93 195 aa27.22■■□□□ 1.95
SMAD1-201ENST00000302085 SYNE4Q8N205 404 aa27.21■■□□□ 1.95
SMAD1-201ENST00000302085 RREB1Q92766 1687 aa27.21■■□□□ 1.95
SMAD1-201ENST00000302085 NUP98P52948 1817 aa27.21■■□□□ 1.95
SMAD1-201ENST00000302085 ATG9AQ7Z3C6 839 aa27.2■■□□□ 1.95
SMAD1-201ENST00000302085 CNTROBQ8N137 903 aa27.2■■□□□ 1.95
SMAD1-201ENST00000302085 TNNI3KQ59H18 835 aa27.2■■□□□ 1.94
SMAD1-201ENST00000302085 ZNF34Q8IZ26 560 aa27.2■■□□□ 1.94
SMAD1-201ENST00000302085 FPGT-TNNI3KV9GXZ4 949 aa27.2■■□□□ 1.94
SMAD1-201ENST00000302085 MYH14Q7Z406 1995 aaKnown RBP27.19■■□□□ 1.94
SMAD1-201ENST00000302085 CDHR2Q9BYE9 1310 aa27.19■■□□□ 1.94
SMAD1-201ENST00000302085 CSF1RP07333 972 aa27.18■■□□□ 1.94
SMAD1-201ENST00000302085 ZNF594Q96JF6 807 aaPredicted RBP27.18■■□□□ 1.94
SMAD1-201ENST00000302085 ANKRD36CQ5JPF3 1778 aa27.18■■□□□ 1.94
SMAD1-201ENST00000302085 FAM182BQ5T319 152 aa27.18■■□□□ 1.94
SMAD1-201ENST00000302085 SNX21Q969T3 373 aa27.18■■□□□ 1.94
SMAD1-201ENST00000302085 ONECUT3O60422 494 aaPredicted RBP27.17■■□□□ 1.94
SMAD1-201ENST00000302085 ATRNO75882 1429 aa27.17■■□□□ 1.94
SMAD1-201ENST00000302085 AK9Q5TCS8 1911 aa27.16■■□□□ 1.94
SMAD1-201ENST00000302085 UBN2Q6ZU65 1347 aa27.16■■□□□ 1.94
SMAD1-201ENST00000302085 EYA2O00167 538 aa27.16■■□□□ 1.94
SMAD1-201ENST00000302085 CAMTA2O94983 1202 aa27.16■■□□□ 1.94
SMAD1-201ENST00000302085 LINC00116Q8NCU8 138 aa27.16■■□□□ 1.94
SMAD1-201ENST00000302085 LRRC24Q50LG9 513 aa27.15■■□□□ 1.94
SMAD1-201ENST00000302085 TRMT112Q9UI30 125 aaKnown RBP27.15■■□□□ 1.94
SMAD1-201ENST00000302085 DBNLQ9UJU6 430 aaKnown RBP27.15■■□□□ 1.94
SMAD1-201ENST00000302085 TRPC5Q9UL62 973 aaPredicted RBP27.15■■□□□ 1.94
SMAD1-201ENST00000302085 ZNF831Q5JPB2 1677 aa27.15■■□□□ 1.94
SMAD1-201ENST00000302085 IL15P40933 162 aaPredicted RBP27.15■■□□□ 1.94
SMAD1-201ENST00000302085 KCNQ4P56696 695 aa27.15■■□□□ 1.94
SMAD1-201ENST00000302085 IL25Q9H293 177 aa27.15■■□□□ 1.94
SMAD1-201ENST00000302085 CIAO1O76071 339 aa27.14■■□□□ 1.94
SMAD1-201ENST00000302085 CCDC57Q2TAC2 916 aa27.14■■□□□ 1.94
SMAD1-201ENST00000302085 EVI5LQ96CN4 794 aa27.13■■□□□ 1.93
SMAD1-201ENST00000302085 PUS3Q9BZE2 481 aaKnown RBP27.13■■□□□ 1.93
SMAD1-201ENST00000302085 COL5A3P25940 1745 aaPredicted RBP27.13■■□□□ 1.93
SMAD1-201ENST00000302085 IRS4O14654 1257 aaPredicted RBP27.13■■□□□ 1.93
SMAD1-201ENST00000302085 HSCBQ8IWL3 235 aa27.13■■□□□ 1.93
SMAD1-201ENST00000302085 CCDC85AQ96PX6 553 aaPredicted RBP27.13■■□□□ 1.93
SMAD1-201ENST00000302085 BOLA2Q9H3K6 86 aa27.13■■□□□ 1.93
SMAD1-201ENST00000302085 TTLL11Q8NHH1 800 aa27.11■■□□□ 1.93
SMAD1-201ENST00000302085 DBNDD2Q9BQY9 259 aa27.11■■□□□ 1.93
SMAD1-201ENST00000302085 GPR108Q9NPR9 543 aa27.11■■□□□ 1.93
SMAD1-201ENST00000302085 SUSD4Q5VX71 490 aa27.11■■□□□ 1.93
SMAD1-201ENST00000302085 SEPT12Q8IYM1 358 aa27.11■■□□□ 1.93
SMAD1-201ENST00000302085 SGSM2O43147 1006 aa27.1■■□□□ 1.93
SMAD1-201ENST00000302085 CD2BP2O95400 341 aaKnown RBP27.1■■□□□ 1.93
SMAD1-201ENST00000302085 ATP5JP18859 108 aa27.1■■□□□ 1.93
SMAD1-201ENST00000302085 ANO2Q9NQ90 1003 aa27.1■■□□□ 1.93
SMAD1-201ENST00000302085 RABEP1Q15276 862 aa27.09■■□□□ 1.93
SMAD1-201ENST00000302085 BTAF1O14981 1849 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms