RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 NEXNQ0ZGT2 675 aa7.23□□□□□ -1.25
PATL1-201ENST00000300146 AOC3Q16853 763 aa7.23□□□□□ -1.25
PATL1-201ENST00000300146 NYXQ9GZU5 481 aa7.23□□□□□ -1.25
PATL1-201ENST00000300146 DBNDD1Q9H9R9 158 aa7.23□□□□□ -1.25
PATL1-201ENST00000300146 LRP5O75197 1615 aa7.23□□□□□ -1.25
PATL1-201ENST00000300146 KCPQ6ZWJ8 1503 aa7.23□□□□□ -1.25
PATL1-201ENST00000300146 SNAP23O00161 211 aa7.23□□□□□ -1.25
PATL1-201ENST00000300146 NPR1P16066 1061 aa7.23□□□□□ -1.25
PATL1-201ENST00000300146 TAF7LQ5H9L4 462 aa7.23□□□□□ -1.25
PATL1-201ENST00000300146 CCDC30Q5VVM6 783 aa7.23□□□□□ -1.25
PATL1-201ENST00000300146 CALD1Q05682 793 aaKnown RBP7.22□□□□□ -1.25
PATL1-201ENST00000300146 FMR1Q06787 632 aaKnown RBP eCLIP7.22□□□□□ -1.25
PATL1-201ENST00000300146 TCIRG1Q13488 830 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 CCDC93Q567U6 631 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 MAP1SQ66K74 1059 aaPredicted RBP7.22□□□□□ -1.25
PATL1-201ENST00000300146 CLUAP1Q96AJ1 413 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 MKRN1Q9UHC7 482 aaKnown RBP7.22□□□□□ -1.25
PATL1-201ENST00000300146 SH3TC1Q8TE82 1336 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 TOGARAM1Q9Y4F4 1720 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 ITGB4P16144 1822 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 PRELPP51888 382 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 PDIA6Q15084 440 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 CLEC4GQ6UXB4 293 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 DPP8Q6V1X1 898 aaPredicted RBP7.22□□□□□ -1.25
PATL1-201ENST00000300146 NLRP10Q86W26 655 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 RBM17Q96I25 401 aaKnown RBP7.22□□□□□ -1.25
PATL1-201ENST00000300146 COL3A1P02461 1466 aaPredicted RBP7.22□□□□□ -1.25
PATL1-201ENST00000300146 NCAPD2Q15021 1401 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 DDX58O95786 925 aaKnown RBP7.22□□□□□ -1.25
PATL1-201ENST00000300146 ALDH1B1P30837 517 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 CELF1Q92879 486 aaKnown RBP7.22□□□□□ -1.25
PATL1-201ENST00000300146 ZBTB12Q9Y330 459 aaPredicted RBP7.22□□□□□ -1.25
PATL1-201ENST00000300146 KDM2BQ8NHM5 1336 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 PXDNLA1KZ92 1463 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 ABCC12Q96J65 1359 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 WTIPA6NIX2 430 aaPredicted RBP7.22□□□□□ -1.25
PATL1-201ENST00000300146 DLK2Q6UY11 383 aa7.22□□□□□ -1.25
PATL1-201ENST00000300146 PPEF1O14829 653 aaPredicted RBP7.21□□□□□ -1.25
PATL1-201ENST00000300146 VEGFAP15692 232 aaPredicted RBP7.21□□□□□ -1.25
PATL1-201ENST00000300146 C9orf78Q9NZ63 289 aaPredicted RBP7.21□□□□□ -1.25
PATL1-201ENST00000300146 HYPKQ9NX55 129 aa7.21□□□□□ -1.26
PATL1-201ENST00000300146 F8W031 263 aaPredicted RBP7.21□□□□□ -1.26
PATL1-201ENST00000300146 KCNJ4P48050 445 aa7.21□□□□□ -1.26
PATL1-201ENST00000300146 EIF6P56537 245 aaKnown RBP7.21□□□□□ -1.26
PATL1-201ENST00000300146 MPNDQ8N594 471 aa7.21□□□□□ -1.26
PATL1-201ENST00000300146 IQSEC3Q9UPP2 1182 aaPredicted RBP7.21□□□□□ -1.26
PATL1-201ENST00000300146 ECM2O94769 699 aaPredicted RBP7.2□□□□□ -1.26
PATL1-201ENST00000300146 PRKG1Q13976 671 aa7.2□□□□□ -1.26
PATL1-201ENST00000300146 HSP90AB3PQ58FF7 597 aa7.2□□□□□ -1.26
PATL1-201ENST00000300146 NIM1KQ8IY84 436 aa7.2□□□□□ -1.26
PATL1-201ENST00000300146 IFT57Q9NWB7 429 aa7.2□□□□□ -1.26
PATL1-201ENST00000300146 RREB1Q92766 1687 aa7.2□□□□□ -1.26
PATL1-201ENST00000300146 KIF3CO14782 793 aa7.2□□□□□ -1.26
PATL1-201ENST00000300146 PLBD2Q8NHP8 589 aa7.2□□□□□ -1.26
PATL1-201ENST00000300146 KCNQ5Q9NR82 932 aa7.2□□□□□ -1.26
PATL1-201ENST00000300146 FRAT2O75474 233 aaPredicted RBP7.19□□□□□ -1.26
PATL1-201ENST00000300146 NTSR2O95665 410 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 CWC25Q9NXE8 425 aaPredicted RBP7.19□□□□□ -1.26
PATL1-201ENST00000300146 ABT1Q9ULW3 272 aaKnown RBP7.19□□□□□ -1.26
PATL1-201ENST00000300146 ERVV-1B6SEH8 477 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 UFL1O94874 794 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 LMOD1P29536 600 aaPredicted RBP7.19□□□□□ -1.26
PATL1-201ENST00000300146 FLIIQ13045 1269 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 PARP10Q53GL7 1025 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 MPHOSPH8Q99549 860 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 FANCIQ9NVI1 1328 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 SHANK3Q9BYB0 1731 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 SHTN1A0MZ66 631 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 GLTPD2A6NH11 291 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 TAF5LO75529 589 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 TOMM70O94826 608 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 EPS15P42566 896 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 ZNF34Q8IZ26 560 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 ZNF594Q96JF6 807 aaPredicted RBP7.19□□□□□ -1.26
PATL1-201ENST00000300146 ZC3H12CQ9C0D7 883 aaKnown RBP7.19□□□□□ -1.26
PATL1-201ENST00000300146 SMC4Q9NTJ3 1288 aa7.19□□□□□ -1.26
PATL1-201ENST00000300146 N4BP2Q86UW6 1770 aaPredicted RBP7.19□□□□□ -1.26
PATL1-201ENST00000300146 IARSP41252 1262 aaKnown RBP7.18□□□□□ -1.26
PATL1-201ENST00000300146 TBC1D10BQ4KMP7 808 aaPredicted RBP7.18□□□□□ -1.26
PATL1-201ENST00000300146 RPS8P62241 208 aaKnown RBP7.18□□□□□ -1.26
PATL1-201ENST00000300146 WASHC4Q2M389 1173 aa7.18□□□□□ -1.26
PATL1-201ENST00000300146 PRAMEF18Q5VWM3 479 aa7.18□□□□□ -1.26
PATL1-201ENST00000300146 WNK3Q9BYP7 1800 aa7.18□□□□□ -1.26
PATL1-201ENST00000300146 ZNF541Q9H0D2 1346 aa7.18□□□□□ -1.26
PATL1-201ENST00000300146 MYH16Q9H6N6 1097 aa7.18□□□□□ -1.26
PATL1-201ENST00000300146 ABCC4O15439 1325 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 SAMD7Q7Z3H4 446 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 MXD3Q9BW11 206 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 SIL1Q9H173 461 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 C5P01031 1676 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 STYK1Q6J9G0 422 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 RTKN2Q8IZC4 609 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 DNAAF4Q8WXU2 420 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 C10orf71Q711Q0 1435 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 RBM5P52756 815 aaKnown RBP eCLIP7.17□□□□□ -1.26
PATL1-201ENST00000300146 FAM161AQ3B820 660 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 ANKRD18AQ8IVF6 992 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 KLHDC4Q8TBB5 520 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 GREM2Q9H772 168 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 CNNM1Q9NRU3 951 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms