RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 VAMP4O75379 141 aa20■□□□□ 0.79
CDCP1-201ENST00000296129 ERLIN2O94905 339 aa20■□□□□ 0.79
CDCP1-201ENST00000296129 BAG4O95429 457 aaKnown RBP20■□□□□ 0.79
CDCP1-201ENST00000296129 ESYT1Q9BSJ8 1104 aa20■□□□□ 0.79
CDCP1-201ENST00000296129 CTAGE5O15320 804 aa20■□□□□ 0.79
CDCP1-201ENST00000296129 RLBP1P12271 317 aa20■□□□□ 0.79
CDCP1-201ENST00000296129 ATP6V1AP38606 617 aa20■□□□□ 0.79
CDCP1-201ENST00000296129 TMX3Q96JJ7 454 aa20■□□□□ 0.79
CDCP1-201ENST00000296129 LMBR1LQ6UX01 489 aa19.99■□□□□ 0.79
CDCP1-201ENST00000296129 ZMYM3Q14202 1370 aa19.99■□□□□ 0.79
CDCP1-201ENST00000296129 EYA1Q99502 592 aa19.99■□□□□ 0.79
CDCP1-201ENST00000296129 ORC3Q9UBD5 711 aaPredicted RBP19.99■□□□□ 0.79
CDCP1-201ENST00000296129 PA2G4Q9UQ80 394 aaKnown RBP19.99■□□□□ 0.79
CDCP1-201ENST00000296129 TRPM2O94759 1503 aa19.99■□□□□ 0.79
CDCP1-201ENST00000296129 SFPQP23246 707 aaKnown RBP eCLIP19.99■□□□□ 0.79
CDCP1-201ENST00000296129 NBPF6Q5VWK0 638 aa19.99■□□□□ 0.79
CDCP1-201ENST00000296129 NBPF5PQ86XG9 351 aaPredicted RBP19.99■□□□□ 0.79
CDCP1-201ENST00000296129 ZNF397Q8NF99 534 aaPredicted RBP19.99■□□□□ 0.79
CDCP1-201ENST00000296129 NBPF4Q96M43 638 aa19.99■□□□□ 0.79
CDCP1-201ENST00000296129 TNIP1Q15025 636 aa19.99■□□□□ 0.79
CDCP1-201ENST00000296129 DDX19AQ9NUU7 478 aaKnown RBP19.99■□□□□ 0.79
CDCP1-201ENST00000296129 ARHGAP29Q52LW3 1261 aa19.98■□□□□ 0.79
CDCP1-201ENST00000296129 TSPY2A6NKD2 308 aa19.98■□□□□ 0.79
CDCP1-201ENST00000296129 NECAB1Q8N987 351 aa19.98■□□□□ 0.79
CDCP1-201ENST00000296129 NFATC2IPQ8NCF5 419 aa19.98■□□□□ 0.79
CDCP1-201ENST00000296129 RBM27Q9P2N5 1060 aaKnown RBP19.98■□□□□ 0.79
CDCP1-201ENST00000296129 CLIP2Q9UDT6 1046 aa19.98■□□□□ 0.79
CDCP1-201ENST00000296129 PDE4BQ07343 736 aa19.98■□□□□ 0.79
CDCP1-201ENST00000296129 SLC26A6Q9BXS9 759 aa19.98■□□□□ 0.79
CDCP1-201ENST00000296129 HOXC9P31274 260 aa19.97■□□□□ 0.79
CDCP1-201ENST00000296129 TMEM266Q2M3C6 531 aa19.97■□□□□ 0.79
CDCP1-201ENST00000296129 KAT14Q9H8E8 782 aa19.97■□□□□ 0.79
CDCP1-201ENST00000296129 USP25Q9UHP3 1055 aa19.97■□□□□ 0.79
CDCP1-201ENST00000296129 ATP2B3Q16720 1220 aa19.97■□□□□ 0.79
CDCP1-201ENST00000296129 CEP85Q6P2H3 762 aa19.97■□□□□ 0.79
CDCP1-201ENST00000296129 TSG101Q99816 390 aa19.97■□□□□ 0.79
CDCP1-201ENST00000296129 RBM8AQ9Y5S9 174 aaKnown RBP19.97■□□□□ 0.79
CDCP1-201ENST00000296129 ERLIN1O75477 346 aa19.97■□□□□ 0.79
CDCP1-201ENST00000296129 BAG3O95817 575 aa19.97■□□□□ 0.79
CDCP1-201ENST00000296129 LDHCP07864 332 aa19.97■□□□□ 0.79
CDCP1-201ENST00000296129 BRF1Q92994 677 aa19.97■□□□□ 0.79
CDCP1-201ENST00000296129 SPTY2D1Q68D10 685 aaPredicted RBP19.96■□□□□ 0.79
CDCP1-201ENST00000296129 CUL5Q93034 780 aa19.96■□□□□ 0.79
CDCP1-201ENST00000296129 ATP7AQ04656 1500 aa19.96■□□□□ 0.79
CDCP1-201ENST00000296129 MCM5P33992 734 aa19.96■□□□□ 0.79
CDCP1-201ENST00000296129 LRRC2Q9BYS8 371 aa19.96■□□□□ 0.79
CDCP1-201ENST00000296129 CWC15Q9P013 229 aaKnown RBP19.96■□□□□ 0.79
CDCP1-201ENST00000296129 RAB34Q9BZG1 259 aa19.96■□□□□ 0.79
CDCP1-201ENST00000296129 TOP1P11387 765 aaKnown RBP19.95■□□□□ 0.78
CDCP1-201ENST00000296129 KIF5BP33176 963 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 UBA5Q9GZZ9 404 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 GOLGA6L10A6NI86 522 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 BIN1O00499 593 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 IL2RBP14784 551 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 ST5P78524 1137 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 CWF19L2Q2TBE0 894 aaKnown RBP19.95■□□□□ 0.78
CDCP1-201ENST00000296129 FKBP15Q5T1M5 1219 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 C8orf34Q49A92 452 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 IQCEQ6IPM2 695 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 ANKRD18AQ8IVF6 992 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 VAT1LQ9HCJ6 419 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 PPP1R12BO60237 982 aaPredicted RBP19.95■□□□□ 0.78
CDCP1-201ENST00000296129 TCEANC2Q96MN5 208 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 KLF18A0A0U1RQI7 1052 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 KCNA6P17658 529 aa19.95■□□□□ 0.78
CDCP1-201ENST00000296129 MCMDC2Q4G0Z9 681 aa19.94■□□□□ 0.78
CDCP1-201ENST00000296129 CRNKL1Q9BZJ0 848 aaKnown RBP19.94■□□□□ 0.78
CDCP1-201ENST00000296129 IL15P40933 162 aaPredicted RBP19.94■□□□□ 0.78
CDCP1-201ENST00000296129 IQSEC3Q9UPP2 1182 aaPredicted RBP19.94■□□□□ 0.78
CDCP1-201ENST00000296129 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
CDCP1-201ENST00000296129 PER1O15534 1290 aaPredicted RBP19.94■□□□□ 0.78
CDCP1-201ENST00000296129 ZFYP08048 801 aaPredicted RBP19.94■□□□□ 0.78
CDCP1-201ENST00000296129 ZSCAN22P10073 491 aaPredicted RBP19.94■□□□□ 0.78
CDCP1-201ENST00000296129 NMIQ13287 307 aaPredicted RBP19.94■□□□□ 0.78
CDCP1-201ENST00000296129 UHRF1BP1Q6BDS2 1440 aa19.94■□□□□ 0.78
CDCP1-201ENST00000296129 ADGRL2O95490 1459 aa19.94■□□□□ 0.78
CDCP1-201ENST00000296129 GCP02774 474 aa19.93■□□□□ 0.78
CDCP1-201ENST00000296129 STX1AQ16623 288 aa19.93■□□□□ 0.78
CDCP1-201ENST00000296129 MAP3K19Q56UN5 1328 aa19.93■□□□□ 0.78
CDCP1-201ENST00000296129 CYP7A1P22680 504 aa19.93■□□□□ 0.78
CDCP1-201ENST00000296129 UBE2HP62256 183 aa19.93■□□□□ 0.78
CDCP1-201ENST00000296129 LEKR1Q6ZMV7 388 aa19.93■□□□□ 0.78
CDCP1-201ENST00000296129 ZNF622Q969S3 477 aaKnown RBP eCLIP19.93■□□□□ 0.78
CDCP1-201ENST00000296129 SLC4A4Q9Y6R1 1079 aa19.93■□□□□ 0.78
CDCP1-201ENST00000296129 PTPN14Q15678 1187 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 C19orf44Q9H6X5 657 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 FAM193AP78312 1265 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 LINS1Q8NG48 757 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 TAF4BQ92750 862 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 PANK2Q9BZ23 570 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 RNMTO43148 476 aaKnown RBP19.92■□□□□ 0.78
CDCP1-201ENST00000296129 CCDC12Q8WUD4 166 aaPredicted RBP19.92■□□□□ 0.78
CDCP1-201ENST00000296129 ZSCAN12O43309 604 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 WTAPQ15007 396 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 SETDB2Q96T68 719 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 DCTPP1Q9H773 170 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 NIP7Q9Y221 180 aaKnown RBP eCLIP19.92■□□□□ 0.78
CDCP1-201ENST00000296129 H0YHG0 523 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 SPA17Q15506 151 aa19.92■□□□□ 0.78
CDCP1-201ENST00000296129 CCDC148Q8NFR7 591 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms