RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 MED1Q15648 1581 aaPredicted RBP21.09■□□□□ 0.97
SYVN1-201ENST00000294256 TTC14Q96N46 770 aa21.09■□□□□ 0.97
SYVN1-201ENST00000294256 GJB2P29033 226 aa21.09■□□□□ 0.97
SYVN1-201ENST00000294256 CLCN1P35523 988 aa21.09■□□□□ 0.97
SYVN1-201ENST00000294256 TFCP2Q12800 502 aa21.09■□□□□ 0.97
SYVN1-201ENST00000294256 FERMT3Q86UX7 667 aa21.09■□□□□ 0.97
SYVN1-201ENST00000294256 CYP46A1Q9Y6A2 500 aa21.09■□□□□ 0.97
SYVN1-201ENST00000294256 ZKSCAN1P17029 563 aaPredicted RBP21.08■□□□□ 0.97
SYVN1-201ENST00000294256 KDM6AO15550 1401 aaPredicted RBP21.08■□□□□ 0.97
SYVN1-201ENST00000294256 SNRPA1P09661 255 aaKnown RBP21.07■□□□□ 0.96
SYVN1-201ENST00000294256 SLFNL1Q499Z3 407 aa21.07■□□□□ 0.96
SYVN1-201ENST00000294256 CCDC129Q6ZRS4 1044 aa21.07■□□□□ 0.96
SYVN1-201ENST00000294256 ZNF589Q86UQ0 364 aaPredicted RBP21.07■□□□□ 0.96
SYVN1-201ENST00000294256 CCDC85AQ96PX6 553 aaPredicted RBP21.07■□□□□ 0.96
SYVN1-201ENST00000294256 HDAC5Q9UQL6 1122 aa21.07■□□□□ 0.96
SYVN1-201ENST00000294256 STX6O43752 255 aa21.07■□□□□ 0.96
SYVN1-201ENST00000294256 CREB3L3Q68CJ9 461 aa21.07■□□□□ 0.96
SYVN1-201ENST00000294256 NEUROD6Q96NK8 337 aa21.07■□□□□ 0.96
SYVN1-201ENST00000294256 METTL22Q9BUU2 404 aaPredicted RBP21.07■□□□□ 0.96
SYVN1-201ENST00000294256 CCDC171Q6TFL3 1326 aa21.07■□□□□ 0.96
SYVN1-201ENST00000294256 MEGF6O75095 1541 aa21.07■□□□□ 0.96
SYVN1-201ENST00000294256 LRSAM1Q6UWE0 723 aa21.07■□□□□ 0.96
SYVN1-201ENST00000294256 FAM173BQ6P4H8 233 aa21.06■□□□□ 0.96
SYVN1-201ENST00000294256 SEC62Q99442 399 aaKnown RBP21.06■□□□□ 0.96
SYVN1-201ENST00000294256 STRN4Q9NRL3 753 aa21.06■□□□□ 0.96
SYVN1-201ENST00000294256 TUBGCP6Q96RT7 1819 aa21.06■□□□□ 0.96
SYVN1-201ENST00000294256 PLCB2Q00722 1185 aa21.06■□□□□ 0.96
SYVN1-201ENST00000294256 ZBTB3Q9H5J0 574 aa21.06■□□□□ 0.96
SYVN1-201ENST00000294256 RPAP1Q9BWH6 1393 aaPredicted RBP21.05■□□□□ 0.96
SYVN1-201ENST00000294256 HEG1Q9ULI3 1381 aa21.05■□□□□ 0.96
SYVN1-201ENST00000294256 MBD3O95983 291 aa21.05■□□□□ 0.96
SYVN1-201ENST00000294256 TOM1L2Q6ZVM7 507 aa21.05■□□□□ 0.96
SYVN1-201ENST00000294256 DDX46Q7L014 1031 aaKnown RBP21.05■□□□□ 0.96
SYVN1-201ENST00000294256 FMNL2Q96PY5 1086 aa21.05■□□□□ 0.96
SYVN1-201ENST00000294256 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.05■□□□□ 0.96
SYVN1-201ENST00000294256 LMO7Q8WWI1 1683 aa21.05■□□□□ 0.96
SYVN1-201ENST00000294256 PPFIA3O75145 1194 aa21.05■□□□□ 0.96
SYVN1-201ENST00000294256 ME3Q16798 604 aa21.05■□□□□ 0.96
SYVN1-201ENST00000294256 NCAPD2Q15021 1401 aa21.05■□□□□ 0.96
SYVN1-201ENST00000294256 ZSCAN22P10073 491 aaPredicted RBP21.04■□□□□ 0.96
SYVN1-201ENST00000294256 LMBR1LQ6UX01 489 aa21.04■□□□□ 0.96
SYVN1-201ENST00000294256 DBNDD2Q9BQY9 259 aa21.04■□□□□ 0.96
SYVN1-201ENST00000294256 A1BGP04217 495 aa21.04■□□□□ 0.96
SYVN1-201ENST00000294256 MSNP26038 577 aaKnown RBP21.04■□□□□ 0.96
SYVN1-201ENST00000294256 DNM1Q05193 864 aaKnown RBP21.04■□□□□ 0.96
SYVN1-201ENST00000294256 TCHHQ07283 1943 aa21.04■□□□□ 0.96
SYVN1-201ENST00000294256 FOSBP53539 338 aa21.03■□□□□ 0.96
SYVN1-201ENST00000294256 TTLL7Q6ZT98 887 aa21.03■□□□□ 0.96
SYVN1-201ENST00000294256 DBNLQ9UJU6 430 aaKnown RBP21.03■□□□□ 0.96
SYVN1-201ENST00000294256 USP54Q70EL1 1684 aa21.03■□□□□ 0.96
SYVN1-201ENST00000294256 SLC27A2O14975 620 aa21.03■□□□□ 0.96
SYVN1-201ENST00000294256 LRRC2Q9BYS8 371 aa21.03■□□□□ 0.96
SYVN1-201ENST00000294256 PRDM11Q9NQV5 511 aa21.03■□□□□ 0.96
SYVN1-201ENST00000294256 TPCN1Q9ULQ1 816 aa21.03■□□□□ 0.96
SYVN1-201ENST00000294256 USP42Q9H9J4 1324 aaKnown RBP21.03■□□□□ 0.96
SYVN1-201ENST00000294256 NECTIN1Q15223 517 aa21.02■□□□□ 0.96
SYVN1-201ENST00000294256 DCAF5Q96JK2 942 aa21.02■□□□□ 0.96
SYVN1-201ENST00000294256 PTPN12Q05209 780 aaKnown RBP21.01■□□□□ 0.95
SYVN1-201ENST00000294256 ZNF594Q96JF6 807 aaPredicted RBP21.01■□□□□ 0.95
SYVN1-201ENST00000294256 SLIT3O75094 1523 aa21.01■□□□□ 0.95
SYVN1-201ENST00000294256 F13A1P00488 732 aa21■□□□□ 0.95
SYVN1-201ENST00000294256 TIMM10P62072 90 aa21■□□□□ 0.95
SYVN1-201ENST00000294256 PPP1R9BQ96SB3 815 aa21■□□□□ 0.95
SYVN1-201ENST00000294256 TSPY26PQ9H489 355 aa21■□□□□ 0.95
SYVN1-201ENST00000294256 NAP1L2Q9ULW6 460 aaPredicted RBP21■□□□□ 0.95
SYVN1-201ENST00000294256 PTMAP06454 111 aaKnown RBP21■□□□□ 0.95
SYVN1-201ENST00000294256 TNNI3KQ59H18 835 aa21■□□□□ 0.95
SYVN1-201ENST00000294256 BLOC1S2Q6QNY1 142 aa21■□□□□ 0.95
SYVN1-201ENST00000294256 ZSWIM6Q9HCJ5 1215 aa21■□□□□ 0.95
SYVN1-201ENST00000294256 FPGT-TNNI3KV9GXZ4 949 aa21■□□□□ 0.95
SYVN1-201ENST00000294256 ST3GAL1Q11201 340 aa20.99■□□□□ 0.95
SYVN1-201ENST00000294256 VPS53Q5VIR6 699 aa20.99■□□□□ 0.95
SYVN1-201ENST00000294256 MAP4K1Q92918 833 aa20.99■□□□□ 0.95
SYVN1-201ENST00000294256 LARP1BQ659C4 914 aaKnown RBP20.99■□□□□ 0.95
SYVN1-201ENST00000294256 TAOK2Q9UL54 1235 aa20.99■□□□□ 0.95
SYVN1-201ENST00000294256 SYAP1Q96A49 352 aaPredicted RBP20.98■□□□□ 0.95
SYVN1-201ENST00000294256 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.98■□□□□ 0.95
SYVN1-201ENST00000294256 FGD1P98174 961 aa20.98■□□□□ 0.95
SYVN1-201ENST00000294256 NBPF26B4DH59 902 aa20.97■□□□□ 0.95
SYVN1-201ENST00000294256 HSP90B1P14625 803 aaKnown RBP20.97■□□□□ 0.95
SYVN1-201ENST00000294256 NBPF14Q5TI25 921 aa20.97■□□□□ 0.95
SYVN1-201ENST00000294256 NBPF10Q6P3W6 841 aaKnown RBP20.97■□□□□ 0.95
SYVN1-201ENST00000294256 NBPF15Q8N660 670 aa20.97■□□□□ 0.95
SYVN1-201ENST00000294256 UTYO14607 1347 aa20.97■□□□□ 0.95
SYVN1-201ENST00000294256 GIMAP6Q6P9H5 292 aa20.97■□□□□ 0.95
SYVN1-201ENST00000294256 ZSCAN30Q86W11 494 aa20.97■□□□□ 0.95
SYVN1-201ENST00000294256 N4BP2Q86UW6 1770 aaPredicted RBP20.97■□□□□ 0.95
SYVN1-201ENST00000294256 KAT6BQ8WYB5 2073 aa20.96■□□□□ 0.95
SYVN1-201ENST00000294256 A0A0G2JS52 829 aa20.96■□□□□ 0.95
SYVN1-201ENST00000294256 GOLIM4O00461 696 aa20.96■□□□□ 0.95
SYVN1-201ENST00000294256 TFIP11Q9UBB9 837 aaKnown RBP20.96■□□□□ 0.95
SYVN1-201ENST00000294256 MTMR6Q9Y217 621 aa20.96■□□□□ 0.95
SYVN1-201ENST00000294256 CADPS2Q86UW7 1296 aa20.96■□□□□ 0.95
SYVN1-201ENST00000294256 DDX11Q96FC9 970 aa20.96■□□□□ 0.95
SYVN1-201ENST00000294256 HIP1O00291 1037 aa20.95■□□□□ 0.94
SYVN1-201ENST00000294256 HCLS1P14317 486 aaPredicted RBP20.95■□□□□ 0.94
SYVN1-201ENST00000294256 RNF20Q5VTR2 975 aa20.95■□□□□ 0.94
SYVN1-201ENST00000294256 CDC37L1Q7L3B6 337 aa20.95■□□□□ 0.94
SYVN1-201ENST00000294256 LRP10Q7Z4F1 713 aa20.95■□□□□ 0.94
SYVN1-201ENST00000294256 MST1RQ04912 1400 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms