RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 LRSAM1Q6UWE0 723 aa30.19■■■□□ 2.42
ROM1-201ENST00000278833 LIMCH1Q9UPQ0 1083 aa30.19■■■□□ 2.42
ROM1-201ENST00000278833 IGKV5-2P06315 115 aa30.18■■■□□ 2.42
ROM1-201ENST00000278833 BICC1Q9H694 974 aaKnown RBP30.18■■■□□ 2.42
ROM1-201ENST00000278833 SASH1O94885 1247 aa30.17■■■□□ 2.42
ROM1-201ENST00000278833 CWC27Q6UX04 472 aaKnown RBP30.17■■■□□ 2.42
ROM1-201ENST00000278833 RASEFQ8IZ41 740 aa30.17■■■□□ 2.42
ROM1-201ENST00000278833 KLHL34Q8N239 644 aa30.17■■■□□ 2.42
ROM1-201ENST00000278833 AFDNP55196 1824 aaKnown RBP30.17■■■□□ 2.42
ROM1-201ENST00000278833 HS1BP3Q53T59 392 aa30.16■■■□□ 2.42
ROM1-201ENST00000278833 LRP10Q7Z4F1 713 aa30.16■■■□□ 2.42
ROM1-201ENST00000278833 IFNL2Q8IZJ0 200 aa30.16■■■□□ 2.42
ROM1-201ENST00000278833 TMEM63CQ9P1W3 806 aa30.16■■■□□ 2.42
ROM1-201ENST00000278833 NEURL1BA8MQ27 555 aa30.16■■■□□ 2.42
ROM1-201ENST00000278833 NCLP19338 710 aaKnown RBP30.16■■■□□ 2.42
ROM1-201ENST00000278833 VPS53Q5VIR6 699 aa30.16■■■□□ 2.42
ROM1-201ENST00000278833 METTL22Q9BUU2 404 aaPredicted RBP30.16■■■□□ 2.42
ROM1-201ENST00000278833 PA2G4Q9UQ80 394 aaKnown RBP30.16■■■□□ 2.42
ROM1-201ENST00000278833 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.16■■■□□ 2.42
ROM1-201ENST00000278833 RFX7Q2KHR2 1363 aa30.15■■■□□ 2.42
ROM1-201ENST00000278833 AK2P54819 239 aa30.15■■■□□ 2.42
ROM1-201ENST00000278833 NEXNQ0ZGT2 675 aa30.15■■■□□ 2.42
ROM1-201ENST00000278833 G3BP1Q13283 466 aaKnown RBP eCLIP30.15■■■□□ 2.42
ROM1-201ENST00000278833 AACSQ86V21 672 aa30.15■■■□□ 2.42
ROM1-201ENST00000278833 PDLIM2Q96JY6 352 aa30.14■■■□□ 2.42
ROM1-201ENST00000278833 STRN4Q9NRL3 753 aa30.14■■■□□ 2.42
ROM1-201ENST00000278833 CCDC171Q6TFL3 1326 aa30.14■■■□□ 2.42
ROM1-201ENST00000278833 ZSCAN31Q96LW9 406 aaPredicted RBP30.14■■■□□ 2.42
ROM1-201ENST00000278833 QTRT2Q9H974 415 aaKnown RBP30.14■■■□□ 2.42
ROM1-201ENST00000278833 ZSWIM6Q9HCJ5 1215 aa30.14■■■□□ 2.42
ROM1-201ENST00000278833 NRAPQ86VF7 1730 aa30.14■■■□□ 2.41
ROM1-201ENST00000278833 EVA1CP58658 441 aa30.13■■■□□ 2.41
ROM1-201ENST00000278833 GCKRQ14397 625 aa30.13■■■□□ 2.41
ROM1-201ENST00000278833 RUFY3Q7L099 469 aa30.13■■■□□ 2.41
ROM1-201ENST00000278833 SYAP1Q96A49 352 aaPredicted RBP30.13■■■□□ 2.41
ROM1-201ENST00000278833 DCAF5Q96JK2 942 aa30.13■■■□□ 2.41
ROM1-201ENST00000278833 ERBB4Q15303 1308 aa30.13■■■□□ 2.41
ROM1-201ENST00000278833 COL5A2P05997 1499 aaPredicted RBP30.12■■■□□ 2.41
ROM1-201ENST00000278833 NECTIN1Q15223 517 aa30.12■■■□□ 2.41
ROM1-201ENST00000278833 POTEAQ6S8J7 498 aa30.12■■■□□ 2.41
ROM1-201ENST00000278833 RIC3Q7Z5B4 369 aa30.12■■■□□ 2.41
ROM1-201ENST00000278833 SH2B1Q9NRF2 756 aaPredicted RBP30.12■■■□□ 2.41
ROM1-201ENST00000278833 EAF2Q96CJ1 260 aaPredicted RBP30.12■■■□□ 2.41
ROM1-201ENST00000278833 RBSNQ9H1K0 784 aa30.12■■■□□ 2.41
ROM1-201ENST00000278833 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.12■■■□□ 2.41
ROM1-201ENST00000278833 PRIM1P49642 420 aaKnown RBP30.11■■■□□ 2.41
ROM1-201ENST00000278833 TRPC5Q9UL62 973 aaPredicted RBP30.11■■■□□ 2.41
ROM1-201ENST00000278833 UBR2Q8IWV8 1755 aa30.11■■■□□ 2.41
ROM1-201ENST00000278833 SNRPA1P09661 255 aaKnown RBP30.1■■■□□ 2.41
ROM1-201ENST00000278833 NOL8Q76FK4 1167 aaKnown RBP30.1■■■□□ 2.41
ROM1-201ENST00000278833 COPRSQ9NQ92 184 aa30.1■■■□□ 2.41
ROM1-201ENST00000278833 NLRP2Q9NX02 1062 aa30.1■■■□□ 2.41
ROM1-201ENST00000278833 RBM27Q9P2N5 1060 aaKnown RBP30.1■■■□□ 2.41
ROM1-201ENST00000278833 MED23Q9ULK4 1368 aa30.1■■■□□ 2.41
ROM1-201ENST00000278833 PDIA4P13667 645 aaKnown RBP30.09■■■□□ 2.41
ROM1-201ENST00000278833 PTH1RQ03431 593 aa30.09■■■□□ 2.41
ROM1-201ENST00000278833 XAGE3Q8WTP9 111 aa30.09■■■□□ 2.41
ROM1-201ENST00000278833 ATRNO75882 1429 aa30.09■■■□□ 2.41
ROM1-201ENST00000278833 PAPPAQ13219 1627 aa30.09■■■□□ 2.41
ROM1-201ENST00000278833 ZSCAN22P10073 491 aaPredicted RBP30.08■■■□□ 2.41
ROM1-201ENST00000278833 VPS72Q15906 364 aa30.08■■■□□ 2.41
ROM1-201ENST00000278833 RABL6Q3YEC7 729 aaPredicted RBP30.08■■■□□ 2.41
ROM1-201ENST00000278833 MAP4K1Q92918 833 aa30.08■■■□□ 2.41
ROM1-201ENST00000278833 NSFL1CQ9UNZ2 370 aaKnown RBP30.08■■■□□ 2.41
ROM1-201ENST00000278833 ZNF496Q96IT1 587 aaPredicted RBP30.08■■■□□ 2.41
ROM1-201ENST00000278833 ALDH8A1Q9H2A2 487 aaPredicted RBP30.08■■■□□ 2.41
ROM1-201ENST00000278833 CASTP20810 708 aaKnown RBP30.07■■■□□ 2.4
ROM1-201ENST00000278833 SLC39A6Q13433 755 aa30.07■■■□□ 2.4
ROM1-201ENST00000278833 ANO8Q9HCE9 1232 aaPredicted RBP30.07■■■□□ 2.4
ROM1-201ENST00000278833 NUP188Q5SRE5 1749 aa30.07■■■□□ 2.4
ROM1-201ENST00000278833 PHF14O94880 888 aa30.06■■■□□ 2.4
ROM1-201ENST00000278833 NFATC2IPQ8NCF5 419 aa30.06■■■□□ 2.4
ROM1-201ENST00000278833 CCDC9Q9Y3X0 531 aaKnown RBP30.06■■■□□ 2.4
ROM1-201ENST00000278833 CYP46A1Q9Y6A2 500 aa30.06■■■□□ 2.4
ROM1-201ENST00000278833 AIMP1Q12904 312 aaKnown RBP30.06■■■□□ 2.4
ROM1-201ENST00000278833 CHAMP1Q96JM3 812 aa30.06■■■□□ 2.4
ROM1-201ENST00000278833 FMNL2Q96PY5 1086 aa30.06■■■□□ 2.4
ROM1-201ENST00000278833 COPS6Q7L5N1 327 aa30.05■■■□□ 2.4
ROM1-201ENST00000278833 ZSCAN30Q86W11 494 aa30.05■■■□□ 2.4
ROM1-201ENST00000278833 PDRG1Q9NUG6 133 aa30.05■■■□□ 2.4
ROM1-201ENST00000278833 ATP6V1DQ9Y5K8 247 aa30.05■■■□□ 2.4
ROM1-201ENST00000278833 WDR17Q8IZU2 1322 aa30.05■■■□□ 2.4
ROM1-201ENST00000278833 STX6O43752 255 aa30.04■■■□□ 2.4
ROM1-201ENST00000278833 ZKSCAN1P17029 563 aaPredicted RBP30.04■■■□□ 2.4
ROM1-201ENST00000278833 RFX5P48382 616 aaPredicted RBP30.04■■■□□ 2.4
ROM1-201ENST00000278833 GJD4Q96KN9 370 aaPredicted RBP30.04■■■□□ 2.4
ROM1-201ENST00000278833 TCHHQ07283 1943 aa30.04■■■□□ 2.4
ROM1-201ENST00000278833 CSB-PGBD3P0DP91 1061 aa30.04■■■□□ 2.4
ROM1-201ENST00000278833 FOXD4L5Q5VV16 416 aaPredicted RBP30.04■■■□□ 2.4
ROM1-201ENST00000278833 ANKRD13DQ6ZTN6 518 aa30.04■■■□□ 2.4
ROM1-201ENST00000278833 FOXD4L4Q8WXT5 416 aaPredicted RBP30.04■■■□□ 2.4
ROM1-201ENST00000278833 JAKMIP1Q96N16 626 aaKnown RBP30.04■■■□□ 2.4
ROM1-201ENST00000278833 SMC3Q9UQE7 1217 aa30.04■■■□□ 2.4
ROM1-201ENST00000278833 RBM8AQ9Y5S9 174 aaKnown RBP30.04■■■□□ 2.4
ROM1-201ENST00000278833 SYCE3A1L190 88 aa30.03■■■□□ 2.4
ROM1-201ENST00000278833 CYP27B1O15528 508 aa30.03■■■□□ 2.4
ROM1-201ENST00000278833 NMIQ13287 307 aaPredicted RBP30.03■■■□□ 2.4
ROM1-201ENST00000278833 TSGA10IPQ3SY00 556 aa30.03■■■□□ 2.4
ROM1-201ENST00000278833 CREB3L3Q68CJ9 461 aa30.03■■■□□ 2.4
ROM1-201ENST00000278833 PRPF40BQ6NWY9 871 aaKnown RBP30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms