RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ESPNB1AK53 854 aa15.69■□□□□ 0.1
C9orf3-201ENST00000277198 RAB11FIP3O75154 756 aa15.69■□□□□ 0.1
C9orf3-201ENST00000277198 HOXB7P09629 217 aa15.69■□□□□ 0.1
C9orf3-201ENST00000277198 INTS4Q96HW7 963 aaKnown RBP15.69■□□□□ 0.1
C9orf3-201ENST00000277198 PPP1R9BQ96SB3 815 aa15.69■□□□□ 0.1
C9orf3-201ENST00000277198 LMBRD1Q9NUN5 540 aa15.69■□□□□ 0.1
C9orf3-201ENST00000277198 CACNA1FO60840 1977 aa15.69■□□□□ 0.1
C9orf3-201ENST00000277198 IL17REQ8NFR9 667 aa15.69■□□□□ 0.1
C9orf3-201ENST00000277198 EXOC6BQ9Y2D4 811 aa15.69■□□□□ 0.1
C9orf3-201ENST00000277198 TAF1LQ8IZX4 1826 aa15.68■□□□□ 0.1
C9orf3-201ENST00000277198 RNMTO43148 476 aaKnown RBP15.68■□□□□ 0.1
C9orf3-201ENST00000277198 MCTP1Q6DN14 999 aa15.68■□□□□ 0.1
C9orf3-201ENST00000277198 SSH3Q8TE77 659 aa15.68■□□□□ 0.1
C9orf3-201ENST00000277198 N4BP2Q86UW6 1770 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-201ENST00000277198 PTCD1O75127 700 aaKnown RBP15.67■□□□□ 0.1
C9orf3-201ENST00000277198 CHMLP26374 656 aa15.67■□□□□ 0.1
C9orf3-201ENST00000277198 ATP6V1AP38606 617 aa15.67■□□□□ 0.1
C9orf3-201ENST00000277198 NASPP49321 788 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-201ENST00000277198 CUL4AQ13619 759 aa15.67■□□□□ 0.1
C9orf3-201ENST00000277198 SCN11AQ9UI33 1791 aa15.67■□□□□ 0.1
C9orf3-201ENST00000277198 C4BP0C0L5 1744 aa15.67■□□□□ 0.1
C9orf3-201ENST00000277198 PNMA6EA0A0J9YXQ4 647 aa15.67■□□□□ 0.1
C9orf3-201ENST00000277198 UBTFL1P0CB47 393 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-201ENST00000277198 SLC39A6Q13433 755 aa15.67■□□□□ 0.1
C9orf3-201ENST00000277198 COL23A1Q86Y22 540 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-201ENST00000277198 USP44Q9H0E7 712 aa15.67■□□□□ 0.1
C9orf3-201ENST00000277198 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-201ENST00000277198 CEMIPQ8WUJ3 1361 aa15.67■□□□□ 0.1
C9orf3-201ENST00000277198 NEK4P51957 841 aa15.66■□□□□ 0.1
C9orf3-201ENST00000277198 SGIP1Q9BQI5 828 aa15.66■□□□□ 0.1
C9orf3-201ENST00000277198 UTRNP46939 3433 aa15.66■□□□□ 0.1
C9orf3-201ENST00000277198 GOLGB1Q14789 3259 aaKnown RBP15.66■□□□□ 0.1
C9orf3-201ENST00000277198 PHF14O94880 888 aa15.66■□□□□ 0.1
C9orf3-201ENST00000277198 ZGPATQ8N5A5 531 aaKnown RBP15.66■□□□□ 0.1
C9orf3-201ENST00000277198 TMX3Q96JJ7 454 aa15.66■□□□□ 0.1
C9orf3-201ENST00000277198 MTFR1LQ9H019 292 aa15.66■□□□□ 0.1
C9orf3-201ENST00000277198 SLC52A2Q9HAB3 445 aa15.66■□□□□ 0.1
C9orf3-201ENST00000277198 MSL1Q68DK7 614 aa15.65■□□□□ 0.1
C9orf3-201ENST00000277198 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
C9orf3-201ENST00000277198 LRRFIP2Q9Y608 721 aaKnown RBP15.65■□□□□ 0.1
C9orf3-201ENST00000277198 MRC1P22897 1456 aa15.65■□□□□ 0.1
C9orf3-201ENST00000277198 POLA2Q14181 598 aa15.64■□□□□ 0.09
C9orf3-201ENST00000277198 HS1BP3Q53T59 392 aa15.64■□□□□ 0.09
C9orf3-201ENST00000277198 HDGFL1Q5TGJ6 251 aa15.64■□□□□ 0.09
C9orf3-201ENST00000277198 PPP1R1BQ9UD71 204 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-201ENST00000277198 ADAMTS7Q9UKP4 1686 aa15.64■□□□□ 0.09
C9orf3-201ENST00000277198 MBD3O95983 291 aa15.64■□□□□ 0.09
C9orf3-201ENST00000277198 PKP1Q13835 747 aa15.64■□□□□ 0.09
C9orf3-201ENST00000277198 ZSCAN23Q3MJ62 389 aa15.64■□□□□ 0.09
C9orf3-201ENST00000277198 AK7Q96M32 723 aa15.64■□□□□ 0.09
C9orf3-201ENST00000277198 QSER1Q2KHR3 1735 aa15.63■□□□□ 0.09
C9orf3-201ENST00000277198 TRIM6-TRIM34B2RNG4 842 aa15.63■□□□□ 0.09
C9orf3-201ENST00000277198 HSP90AB4PQ58FF6 505 aa15.63■□□□□ 0.09
C9orf3-201ENST00000277198 GNPATO15228 680 aa15.62■□□□□ 0.09
C9orf3-201ENST00000277198 BRD1O95696 1058 aa15.62■□□□□ 0.09
C9orf3-201ENST00000277198 ANO2Q9NQ90 1003 aa15.62■□□□□ 0.09
C9orf3-201ENST00000277198 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.62■□□□□ 0.09
C9orf3-201ENST00000277198 CAVIN1Q6NZI2 390 aaKnown RBP15.62■□□□□ 0.09
C9orf3-201ENST00000277198 RILPL2Q969X0 211 aa15.62■□□□□ 0.09
C9orf3-201ENST00000277198 KIF1BPQ96EK5 621 aa15.62■□□□□ 0.09
C9orf3-201ENST00000277198 UBR3Q6ZT12 1888 aa15.61■□□□□ 0.09
C9orf3-201ENST00000277198 PRPF40AO75400 957 aaKnown RBP15.61■□□□□ 0.09
C9orf3-201ENST00000277198 KCPQ6ZWJ8 1503 aa15.6■□□□□ 0.09
C9orf3-201ENST00000277198 HSPA4P34932 840 aa15.6■□□□□ 0.09
C9orf3-201ENST00000277198 HDAC5Q9UQL6 1122 aa15.6■□□□□ 0.09
C9orf3-201ENST00000277198 EIF4A1P60842 406 aaKnown RBP15.6■□□□□ 0.09
C9orf3-201ENST00000277198 USP42Q9H9J4 1324 aaKnown RBP15.59■□□□□ 0.09
C9orf3-201ENST00000277198 KCNQ3O43525 872 aa15.59■□□□□ 0.09
C9orf3-201ENST00000277198 PPP1R42Q7Z4L9 355 aa15.59■□□□□ 0.09
C9orf3-201ENST00000277198 ZSCAN30Q86W11 494 aa15.59■□□□□ 0.09
C9orf3-201ENST00000277198 DNAJC10Q8IXB1 793 aa15.59■□□□□ 0.09
C9orf3-201ENST00000277198 RHPN1Q8TCX5 695 aa15.59■□□□□ 0.09
C9orf3-201ENST00000277198 GPT2Q8TD30 523 aa15.59■□□□□ 0.09
C9orf3-201ENST00000277198 FHDC1Q9C0D6 1143 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-201ENST00000277198 TJP1Q07157 1748 aa15.59■□□□□ 0.09
C9orf3-201ENST00000277198 SURF6O75683 361 aaKnown RBP15.58■□□□□ 0.09
C9orf3-201ENST00000277198 NCLP19338 710 aaKnown RBP15.58■□□□□ 0.09
C9orf3-201ENST00000277198 COL5A3P25940 1745 aaPredicted RBP15.58■□□□□ 0.09
C9orf3-201ENST00000277198 TSHZ3Q63HK5 1081 aa15.58■□□□□ 0.09
C9orf3-201ENST00000277198 PALD1Q9ULE6 856 aa15.58■□□□□ 0.09
C9orf3-201ENST00000277198 MYH14Q7Z406 1995 aaKnown RBP15.58■□□□□ 0.09
C9orf3-201ENST00000277198 ERBB4Q15303 1308 aa15.58■□□□□ 0.08
C9orf3-201ENST00000277198 MTX1Q13505 466 aa15.58■□□□□ 0.08
C9orf3-201ENST00000277198 BEND3Q5T5X7 828 aa15.58■□□□□ 0.08
C9orf3-201ENST00000277198 KLHL34Q8N239 644 aa15.58■□□□□ 0.08
C9orf3-201ENST00000277198 PI4K2BQ8TCG2 481 aa15.58■□□□□ 0.08
C9orf3-201ENST00000277198 DNAAF4Q8WXU2 420 aa15.58■□□□□ 0.08
C9orf3-201ENST00000277198 NECTIN2Q92692 538 aa15.58■□□□□ 0.08
C9orf3-201ENST00000277198 TTC41PQ6P2S7 1318 aa15.57■□□□□ 0.08
C9orf3-201ENST00000277198 CRKLP46109 303 aaKnown RBP15.57■□□□□ 0.08
C9orf3-201ENST00000277198 TEFQ10587 303 aa15.57■□□□□ 0.08
C9orf3-201ENST00000277198 LRSAM1Q6UWE0 723 aa15.57■□□□□ 0.08
C9orf3-201ENST00000277198 CNTROBQ8N137 903 aa15.57■□□□□ 0.08
C9orf3-201ENST00000277198 SLC16A10Q8TF71 515 aa15.57■□□□□ 0.08
C9orf3-201ENST00000277198 PDLIM2Q96JY6 352 aa15.57■□□□□ 0.08
C9orf3-201ENST00000277198 PHAXQ9H814 394 aaKnown RBP15.57■□□□□ 0.08
C9orf3-201ENST00000277198 RAD50Q92878 1312 aa15.57■□□□□ 0.08
C9orf3-201ENST00000277198 SGSM2O43147 1006 aa15.56■□□□□ 0.08
C9orf3-201ENST00000277198 SYAP1Q96A49 352 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-201ENST00000277198 CNTNAP4Q9C0A0 1308 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms