RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 CCDC174Q6PII3 467 aa17.3■□□□□ 0.36
NID1-201ENST00000264187 SSH1Q8WYL5 1049 aa17.3■□□□□ 0.36
NID1-201ENST00000264187 EHMT1Q9H9B1 1298 aa17.3■□□□□ 0.36
NID1-201ENST00000264187 SLFN5Q08AF3 891 aa17.3■□□□□ 0.36
NID1-201ENST00000264187 TIGD1Q96MW7 591 aa17.3■□□□□ 0.36
NID1-201ENST00000264187 SCAPERQ9BY12 1400 aa17.3■□□□□ 0.36
NID1-201ENST00000264187 HCLS1P14317 486 aaPredicted RBP17.3■□□□□ 0.36
NID1-201ENST00000264187 RNF41Q9H4P4 317 aaPredicted RBP17.3■□□□□ 0.36
NID1-201ENST00000264187 SMIM23A6NLE4 172 aa17.29■□□□□ 0.36
NID1-201ENST00000264187 CKAP4Q07065 602 aaKnown RBP17.29■□□□□ 0.36
NID1-201ENST00000264187 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.29■□□□□ 0.362e-7■□□□□ 10.4
NID1-201ENST00000264187 V9GYY5 206 aaPredicted RBP17.29■□□□□ 0.36
NID1-201ENST00000264187 TMEM110-MUSTN1A8MSY1 372 aa17.29■□□□□ 0.36
NID1-201ENST00000264187 FERMT1Q9BQL6 677 aa17.29■□□□□ 0.36
NID1-201ENST00000264187 WDHD1O75717 1129 aaPredicted RBP17.29■□□□□ 0.36
NID1-201ENST00000264187 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
NID1-201ENST00000264187 JARID2Q92833 1246 aaPredicted RBP17.29■□□□□ 0.36
NID1-201ENST00000264187 ARID5AQ03989 594 aa17.29■□□□□ 0.36
NID1-201ENST00000264187 RRAGBQ5VZM2 374 aa17.29■□□□□ 0.36
NID1-201ENST00000264187 FAM114A1Q8IWE2 563 aa17.29■□□□□ 0.36
NID1-201ENST00000264187 ZBTB3Q9H5J0 574 aa17.29■□□□□ 0.36
NID1-201ENST00000264187 DPH6Q7L8W6 267 aa17.29■□□□□ 0.36
NID1-201ENST00000264187 RPGRQ92834 1020 aaKnown RBP17.29■□□□□ 0.36
NID1-201ENST00000264187 KRT13P13646 458 aa17.28■□□□□ 0.36
NID1-201ENST00000264187 KAT14Q9H8E8 782 aa17.28■□□□□ 0.36
NID1-201ENST00000264187 DAAM2Q86T65 1068 aa17.28■□□□□ 0.36
NID1-201ENST00000264187 SPAG5Q96R06 1193 aa17.28■□□□□ 0.36
NID1-201ENST00000264187 EXOC1Q9NV70 894 aa17.28■□□□□ 0.36
NID1-201ENST00000264187 CCDC102BQ68D86 513 aa17.28■□□□□ 0.36
NID1-201ENST00000264187 CFAP57Q96MR6 1250 aa17.28■□□□□ 0.36
NID1-201ENST00000264187 KIF4AO95239 1232 aa17.28■□□□□ 0.36
NID1-201ENST00000264187 METAP2P50579 478 aaKnown RBP eCLIP17.28■□□□□ 0.36
NID1-201ENST00000264187 DNAI1Q9UI46 699 aa17.28■□□□□ 0.36
NID1-201ENST00000264187 NDC80O14777 642 aa17.27■□□□□ 0.36
NID1-201ENST00000264187 TBCAO75347 108 aaKnown RBP17.27■□□□□ 0.36
NID1-201ENST00000264187 CFAP58Q5T655 872 aa17.27■□□□□ 0.36
NID1-201ENST00000264187 SELENOSQ9BQE4 189 aa17.27■□□□□ 0.36
NID1-201ENST00000264187 GTF2A1P52655 376 aaPredicted RBP17.27■□□□□ 0.36
NID1-201ENST00000264187 UBASH3AP57075 661 aa17.27■□□□□ 0.36
NID1-201ENST00000264187 MSL1Q68DK7 614 aa17.27■□□□□ 0.35
NID1-201ENST00000264187 CEP57Q86XR8 500 aa17.27■□□□□ 0.35
NID1-201ENST00000264187 ZNF526Q8TF50 670 aaPredicted RBP17.27■□□□□ 0.35
NID1-201ENST00000264187 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.35
NID1-201ENST00000264187 DNAJC21Q5F1R6 531 aaKnown RBP17.26■□□□□ 0.35
NID1-201ENST00000264187 LRRC2Q9BYS8 371 aa17.26■□□□□ 0.35
NID1-201ENST00000264187 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
NID1-201ENST00000264187 ZBTB16Q05516 673 aa17.26■□□□□ 0.35
NID1-201ENST00000264187 STXBP4Q6ZWJ1 553 aa17.26■□□□□ 0.35
NID1-201ENST00000264187 NECAB1Q8N987 351 aa17.26■□□□□ 0.35
NID1-201ENST00000264187 PRDM2Q13029 1718 aa17.26■□□□□ 0.35
NID1-201ENST00000264187 ECM2O94769 699 aaPredicted RBP17.26■□□□□ 0.35
NID1-201ENST00000264187 GSTA5Q7RTV2 222 aa17.26■□□□□ 0.35
NID1-201ENST00000264187 GOLGA6L9A6NEM1 432 aa17.26■□□□□ 0.35
NID1-201ENST00000264187 THEMISQ8N1K5 641 aaPredicted RBP17.26■□□□□ 0.35
NID1-201ENST00000264187 TBC1D5Q92609 795 aa17.25■□□□□ 0.35
NID1-201ENST00000264187 ZWINTO95229 277 aa17.25■□□□□ 0.35
NID1-201ENST00000264187 UBE2Q2Q8WVN8 375 aa17.25■□□□□ 0.35
NID1-201ENST00000264187 PHACTR2O75167 634 aa17.25■□□□□ 0.35
NID1-201ENST00000264187 MICALL1Q8N3F8 863 aa17.25■□□□□ 0.35
NID1-201ENST00000264187 TTC21AQ8NDW8 1320 aa17.25■□□□□ 0.35
NID1-201ENST00000264187 CTAGE15A4D2H0 777 aa17.25■□□□□ 0.35
NID1-201ENST00000264187 ATP5J2-PTCD1G3V325 749 aa17.25■□□□□ 0.35
NID1-201ENST00000264187 CTAGE8P0CG41 777 aa17.25■□□□□ 0.35
NID1-201ENST00000264187 CTAGE6Q86UF2 777 aa17.25■□□□□ 0.35
NID1-201ENST00000264187 CTAGE4Q8IX94 777 aa17.25■□□□□ 0.35
NID1-201ENST00000264187 CAPZA3Q96KX2 299 aa17.25■□□□□ 0.35
NID1-201ENST00000264187 SREK1Q8WXA9 508 aaKnown RBP17.24■□□□□ 0.35
NID1-201ENST00000264187 ARHGAP5Q13017 1502 aa17.24■□□□□ 0.35
NID1-201ENST00000264187 KIF5BP33176 963 aa17.24■□□□□ 0.35
NID1-201ENST00000264187 MFSD6Q6ZSS7 791 aa17.24■□□□□ 0.35
NID1-201ENST00000264187 TCEANC2Q96MN5 208 aa17.24■□□□□ 0.35
NID1-201ENST00000264187 NAP1L3Q99457 506 aaPredicted RBP17.24■□□□□ 0.35
NID1-201ENST00000264187 STX8Q9UNK0 236 aa17.24■□□□□ 0.35
NID1-201ENST00000264187 EEF2P13639 858 aaKnown RBP17.24■□□□□ 0.35
NID1-201ENST00000264187 SMARCA2P51531 1590 aa17.24■□□□□ 0.35
NID1-201ENST00000264187 TTF1Q15361 905 aaPredicted RBP17.24■□□□□ 0.35
NID1-201ENST00000264187 SYKP43405 635 aa17.24■□□□□ 0.35
NID1-201ENST00000264187 PLCB3Q01970 1234 aa17.24■□□□□ 0.35
NID1-201ENST00000264187 AKNAD1Q5T1N1 836 aa17.24■□□□□ 0.35
NID1-201ENST00000264187 PLEKHH1Q9ULM0 1364 aa17.23■□□□□ 0.35
NID1-201ENST00000264187 IFI16Q16666 785 aaKnown RBP17.23■□□□□ 0.35
NID1-201ENST00000264187 NSRP1Q9H0G5 558 aaKnown RBP17.23■□□□□ 0.35
NID1-201ENST00000264187 ADAMTS2O95450 1211 aa17.23■□□□□ 0.35
NID1-201ENST00000264187 RARSP54136 660 aaKnown RBP17.23■□□□□ 0.35
NID1-201ENST00000264187 ZSCAN23Q3MJ62 389 aa17.23■□□□□ 0.35
NID1-201ENST00000264187 KRT222Q8N1A0 295 aa17.23■□□□□ 0.35
NID1-201ENST00000264187 SKILP12757 684 aa17.23■□□□□ 0.35
NID1-201ENST00000264187 TPD52P55327 224 aaPredicted RBP17.23■□□□□ 0.35
NID1-201ENST00000264187 NEK1Q96PY6 1258 aa17.23■□□□□ 0.35
NID1-201ENST00000264187 ERBINQ96RT1 1412 aa17.23■□□□□ 0.35
NID1-201ENST00000264187 ANO6Q4KMQ2 910 aa17.23■□□□□ 0.35
NID1-201ENST00000264187 SMC6Q96SB8 1091 aa17.23■□□□□ 0.35
NID1-201ENST00000264187 NSD3Q9BZ95 1437 aa17.23■□□□□ 0.35
NID1-201ENST00000264187 TBC1D9Q6ZT07 1266 aa17.23■□□□□ 0.35
NID1-201ENST00000264187 EVI5LQ96CN4 794 aa17.22■□□□□ 0.35
NID1-201ENST00000264187 ARFGAP3Q9NP61 516 aa17.22■□□□□ 0.35
NID1-201ENST00000264187 EHBP1Q8NDI1 1231 aa17.22■□□□□ 0.35
NID1-201ENST00000264187 CABP5Q9NP86 173 aa17.22■□□□□ 0.35
NID1-201ENST00000264187 PAXBP1Q9Y5B6 917 aa17.22■□□□□ 0.35
NID1-201ENST00000264187 LDHAL6AQ6ZMR3 332 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms