RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 CKAP4Q07065 602 aaKnown RBP18.88■□□□□ 0.61
USP13-201ENST00000263966 C6orf50Q9HD87 102 aa18.88■□□□□ 0.61
USP13-201ENST00000263966 PODXL2Q9NZ53 605 aa18.88■□□□□ 0.61
USP13-201ENST00000263966 PDE3AQ14432 1141 aa18.88■□□□□ 0.61
USP13-201ENST00000263966 PLEKHH1Q9ULM0 1364 aa18.88■□□□□ 0.61
USP13-201ENST00000263966 IL27Q8NEV9 243 aa18.88■□□□□ 0.61
USP13-201ENST00000263966 NYXQ9GZU5 481 aa18.88■□□□□ 0.61
USP13-201ENST00000263966 TCHPQ9BT92 498 aa18.88■□□□□ 0.61
USP13-201ENST00000263966 HFM1A2PYH4 1435 aa18.88■□□□□ 0.61
USP13-201ENST00000263966 MFSD6Q6ZSS7 791 aa18.88■□□□□ 0.61
USP13-201ENST00000263966 RPGRIP1LQ68CZ1 1315 aa18.88■□□□□ 0.61
USP13-201ENST00000263966 WDR63Q8IWG1 891 aa18.87■□□□□ 0.61
USP13-201ENST00000263966 EXOSC9Q06265 439 aaKnown RBP18.87■□□□□ 0.61
USP13-201ENST00000263966 CCT6BQ92526 530 aa18.87■□□□□ 0.61
USP13-201ENST00000263966 SELENOOQ9BVL4 669 aa18.87■□□□□ 0.61
USP13-201ENST00000263966 VAT1LQ9HCJ6 419 aa18.87■□□□□ 0.61
USP13-201ENST00000263966 GOLGA1Q92805 767 aa18.87■□□□□ 0.61
USP13-201ENST00000263966 MAK16Q9BXY0 300 aaKnown RBP18.87■□□□□ 0.61
USP13-201ENST00000263966 POLA1P09884 1462 aaPredicted RBP18.87■□□□□ 0.61
USP13-201ENST00000263966 SPDYE3A6NKU9 549 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 BCAR3O75815 825 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 KIF4BQ2VIQ3 1234 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 ZNF804AQ7Z570 1209 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 RMND1Q9NWS8 449 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 NBPF7P0C2Y1 421 aaPredicted RBP18.86■□□□□ 0.61
USP13-201ENST00000263966 MYD88Q99836 296 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 ANKRD30BQ9BXX2 1392 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 CCDC144CPQ8IYA2 1237 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 GSDMBQ8TAX9 411 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 MSH6P52701 1360 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 POTEB2H3BUK9 544 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 ERBINQ96RT1 1412 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 GOLGA8BA8MQT2 603 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 CCDC89Q8N998 374 aa18.86■□□□□ 0.61
USP13-201ENST00000263966 TBC1D31Q96DN5 1066 aa18.85■□□□□ 0.61
USP13-201ENST00000263966 SH2B1Q9NRF2 756 aaPredicted RBP18.85■□□□□ 0.61
USP13-201ENST00000263966 GRIN2BQ13224 1484 aa18.85■□□□□ 0.61
USP13-201ENST00000263966 ATP2A2P16615 1042 aaKnown RBP18.85■□□□□ 0.61
USP13-201ENST00000263966 CUL4BQ13620 913 aa18.85■□□□□ 0.61
USP13-201ENST00000263966 SCAND2PQ9GZW5 306 aaPredicted RBP18.85■□□□□ 0.61
USP13-201ENST00000263966 CEP112Q8N8E3 955 aa18.85■□□□□ 0.61
USP13-201ENST00000263966 TNPO1Q92973 898 aaKnown RBP18.85■□□□□ 0.61
USP13-201ENST00000263966 STMN4Q9H169 189 aaPredicted RBP18.85■□□□□ 0.61
USP13-201ENST00000263966 DNA2P51530 1060 aa18.85■□□□□ 0.61
USP13-201ENST00000263966 CFAP58Q5T655 872 aa18.85■□□□□ 0.61
USP13-201ENST00000263966 FGD5Q6ZNL6 1462 aa18.85■□□□□ 0.61
USP13-201ENST00000263966 NCOA2Q15596 1464 aa18.85■□□□□ 0.61
USP13-201ENST00000263966 MXRA7P84157 204 aa18.84■□□□□ 0.61
USP13-201ENST00000263966 FMNL3Q8IVF7 1028 aa18.84■□□□□ 0.61
USP13-201ENST00000263966 KIF18AQ8NI77 898 aa18.84■□□□□ 0.61
USP13-201ENST00000263966 CHD1LQ86WJ1 897 aa18.84■□□□□ 0.61
USP13-201ENST00000263966 TPD52P55327 224 aaPredicted RBP18.84■□□□□ 0.61
USP13-201ENST00000263966 TAF7Q15545 349 aaPredicted RBP18.84■□□□□ 0.61
USP13-201ENST00000263966 JAKMIP2Q96AA8 810 aa18.84■□□□□ 0.61
USP13-201ENST00000263966 CWC25Q9NXE8 425 aaPredicted RBP18.84■□□□□ 0.61
USP13-201ENST00000263966 CRCPO75575 148 aa18.84■□□□□ 0.61
USP13-201ENST00000263966 CCDC63Q8NA47 563 aa18.84■□□□□ 0.61
USP13-201ENST00000263966 PDCL2Q8N4E4 241 aa18.84■□□□□ 0.61
USP13-201ENST00000263966 NACA2Q9H009 215 aa18.84■□□□□ 0.61
USP13-201ENST00000263966 PICK1Q9NRD5 415 aa18.84■□□□□ 0.61
USP13-201ENST00000263966 PARP3Q9Y6F1 533 aa18.84■□□□□ 0.61
USP13-201ENST00000263966 GOLGA8AA7E2F4 631 aa18.83■□□□□ 0.61
USP13-201ENST00000263966 IDEP14735 1019 aa18.83■□□□□ 0.61
USP13-201ENST00000263966 TMEM67Q5HYA8 995 aa18.83■□□□□ 0.61
USP13-201ENST00000263966 ZBTB16Q05516 673 aa18.83■□□□□ 0.61
USP13-201ENST00000263966 GSTA5Q7RTV2 222 aa18.83■□□□□ 0.6
USP13-201ENST00000263966 NOL3O60936 208 aaKnown RBP18.83■□□□□ 0.6
USP13-201ENST00000263966 KIF14Q15058 1648 aa18.83■□□□□ 0.6
USP13-201ENST00000263966 STX8Q9UNK0 236 aa18.82■□□□□ 0.6
USP13-201ENST00000263966 GOLGA6L9A6NEM1 432 aa18.82■□□□□ 0.6
USP13-201ENST00000263966 PLCG2P16885 1265 aa18.82■□□□□ 0.6
USP13-201ENST00000263966 SATB1Q01826 763 aa18.82■□□□□ 0.6
USP13-201ENST00000263966 HOOK2Q96ED9 719 aa18.82■□□□□ 0.6
USP13-201ENST00000263966 TMOD4Q9NZQ9 345 aa18.82■□□□□ 0.6
USP13-201ENST00000263966 CCDC61Q9Y6R9 512 aa18.82■□□□□ 0.6
USP13-201ENST00000263966 GNAQP50148 359 aa18.82■□□□□ 0.6
USP13-201ENST00000263966 RRS1Q15050 365 aaKnown RBP18.82■□□□□ 0.6
USP13-201ENST00000263966 PTPN14Q15678 1187 aa18.82■□□□□ 0.6
USP13-201ENST00000263966 DPH6Q7L8W6 267 aa18.82■□□□□ 0.6
USP13-201ENST00000263966 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.82■□□□□ 0.6
USP13-201ENST00000263966 NSRP1Q9H0G5 558 aaKnown RBP18.82■□□□□ 0.6
USP13-201ENST00000263966 SERPINA10Q9UK55 444 aa18.82■□□□□ 0.6
USP13-201ENST00000263966 FCHSD2O94868 740 aa18.81■□□□□ 0.6
USP13-201ENST00000263966 MMRN2Q9H8L6 949 aa18.81■□□□□ 0.6
USP13-201ENST00000263966 FBF1Q8TES7 1133 aa18.81■□□□□ 0.6
USP13-201ENST00000263966 FAM212AQ96EL1 285 aa18.81■□□□□ 0.6
USP13-201ENST00000263966 VEZTQ9HBM0 779 aa18.81■□□□□ 0.6
USP13-201ENST00000263966 SMARCC1Q92922 1105 aaPredicted RBP18.8■□□□□ 0.6
USP13-201ENST00000263966 SIRT1Q96EB6 747 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 SMC6Q96SB8 1091 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 CCDC77Q9BR77 488 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 PFDN4Q9NQP4 134 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 C9orf84Q5VXU9 1444 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 GIPC1O14908 333 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 BMP15O95972 392 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 RNF187Q5TA31 235 aaPredicted RBP18.8■□□□□ 0.6
USP13-201ENST00000263966 CADPS2Q86UW7 1296 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 SMARCC2Q8TAQ2 1214 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 UBAP1LF5GYI3 381 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 SPOUT1Q5T280 376 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms