RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 NAA16Q6N069 864 aaPredicted RBP16.31■□□□□ 0.2
CDH1-201ENST00000261769 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
CDH1-201ENST00000261769 PLBD2Q8NHP8 589 aa16.31■□□□□ 0.2
CDH1-201ENST00000261769 CCDC12Q8WUD4 166 aaPredicted RBP16.31■□□□□ 0.2
CDH1-201ENST00000261769 VAMP4O75379 141 aa16.31■□□□□ 0.2
CDH1-201ENST00000261769 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
CDH1-201ENST00000261769 GOLGA6L1Q8N7Z2 621 aa16.31■□□□□ 0.2
CDH1-201ENST00000261769 ANKRD44Q8N8A2 993 aa16.31■□□□□ 0.2
CDH1-201ENST00000261769 KRI1Q8N9T8 703 aaKnown RBP16.3■□□□□ 0.2
CDH1-201ENST00000261769 LMOD1P29536 600 aaPredicted RBP16.3■□□□□ 0.2
CDH1-201ENST00000261769 HMGN5P82970 282 aaKnown RBP16.3■□□□□ 0.2
CDH1-201ENST00000261769 PER1O15534 1290 aaPredicted RBP16.3■□□□□ 0.2
CDH1-201ENST00000261769 RAB34Q9BZG1 259 aa16.3■□□□□ 0.2
CDH1-201ENST00000261769 QTRT2Q9H974 415 aaKnown RBP16.3■□□□□ 0.2
CDH1-201ENST00000261769 KAT14Q9H8E8 782 aa16.29■□□□□ 0.2
CDH1-201ENST00000261769 NAP1L1P55209 391 aaKnown RBP16.29■□□□□ 0.2
CDH1-201ENST00000261769 SYCP1Q15431 976 aa16.29■□□□□ 0.2
CDH1-201ENST00000261769 MPHOSPH6Q99547 160 aaKnown RBP16.29■□□□□ 0.2
CDH1-201ENST00000261769 HMG20BQ9P0W2 317 aa16.29■□□□□ 0.2
CDH1-201ENST00000261769 CCAR2Q8N163 923 aaKnown RBP16.29■□□□□ 0.2
CDH1-201ENST00000261769 PHAXQ9H814 394 aaKnown RBP16.29■□□□□ 0.2
CDH1-201ENST00000261769 ERVK-7P63135 1459 aa16.29■□□□□ 0.2
CDH1-201ENST00000261769 GSE1Q14687 1217 aa16.29■□□□□ 0.2
CDH1-201ENST00000261769 HOMER1Q86YM7 354 aa16.29■□□□□ 0.2
CDH1-201ENST00000261769 CCDC191Q8NCU4 936 aa16.29■□□□□ 0.2
CDH1-201ENST00000261769 GOLGA8AA7E2F4 631 aa16.28■□□□□ 0.2
CDH1-201ENST00000261769 GOLGA8BA8MQT2 603 aa16.28■□□□□ 0.2
CDH1-201ENST00000261769 DDX11Q96FC9 970 aa16.28■□□□□ 0.2
CDH1-201ENST00000261769 METP08581 1390 aa16.28■□□□□ 0.2
CDH1-201ENST00000261769 SBNO2Q9Y2G9 1366 aa16.28■□□□□ 0.2
CDH1-201ENST00000261769 ADGBQ8N7X0 1667 aa16.28■□□□□ 0.2
CDH1-201ENST00000261769 PRPF40AO75400 957 aaKnown RBP16.28■□□□□ 0.2
CDH1-201ENST00000261769 UPF3BQ9BZI7 483 aaKnown RBP16.28■□□□□ 0.2
CDH1-201ENST00000261769 TTC37Q6PGP7 1564 aa16.28■□□□□ 0.2
CDH1-201ENST00000261769 F8W031 263 aaPredicted RBP16.28■□□□□ 0.2
CDH1-201ENST00000261769 IL27Q8NEV9 243 aa16.28■□□□□ 0.2
CDH1-201ENST00000261769 KDM6BO15054 1643 aa16.28■□□□□ 0.2
CDH1-201ENST00000261769 NCOA7Q8NI08 942 aa16.28■□□□□ 0.2
CDH1-201ENST00000261769 CIZ1Q9ULV3 898 aaPredicted RBP16.28■□□□□ 0.2
CDH1-201ENST00000261769 IQSEC3Q9UPP2 1182 aaPredicted RBP16.28■□□□□ 0.2
CDH1-201ENST00000261769 H0YIN7 160 aa16.27■□□□□ 0.2
CDH1-201ENST00000261769 CWF19L2Q2TBE0 894 aaKnown RBP16.27■□□□□ 0.2
CDH1-201ENST00000261769 BMP2KLQ5H9B9 411 aa16.27■□□□□ 0.2
CDH1-201ENST00000261769 SPATA32Q96LK8 384 aa16.27■□□□□ 0.2
CDH1-201ENST00000261769 PTPRTO14522 1441 aa16.27■□□□□ 0.2
CDH1-201ENST00000261769 HDAC1Q13547 482 aaPredicted RBP16.27■□□□□ 0.2
CDH1-201ENST00000261769 PPP4R3AQ6IN85 833 aa16.27■□□□□ 0.2
CDH1-201ENST00000261769 CCDC194A0A1B0GVG4 234 aa16.27■□□□□ 0.19
CDH1-201ENST00000261769 TMEM67Q5HYA8 995 aa16.27■□□□□ 0.19
CDH1-201ENST00000261769 DNAJC10Q8IXB1 793 aa16.27■□□□□ 0.19
CDH1-201ENST00000261769 C8orf76Q96K31 380 aa16.27■□□□□ 0.19
CDH1-201ENST00000261769 ZFYVE27Q5T4F4 411 aa16.26■□□□□ 0.19
CDH1-201ENST00000261769 RXRBP28702 533 aa16.26■□□□□ 0.19
CDH1-201ENST00000261769 PLXNC1O60486 1568 aa16.26■□□□□ 0.19
CDH1-201ENST00000261769 SSRP1Q08945 709 aaKnown RBP16.26■□□□□ 0.19
CDH1-201ENST00000261769 CEP57L1Q8IYX8 460 aa16.26■□□□□ 0.19
CDH1-201ENST00000261769 METTL22Q9BUU2 404 aaPredicted RBP16.26■□□□□ 0.19
CDH1-201ENST00000261769 KRT23Q9C075 422 aa16.26■□□□□ 0.19
CDH1-201ENST00000261769 SMARCE1Q969G3 411 aa16.25■□□□□ 0.19
CDH1-201ENST00000261769 PDCL3Q9H2J4 239 aa16.25■□□□□ 0.19
CDH1-201ENST00000261769 TNNI2P48788 182 aa16.25■□□□□ 0.19
CDH1-201ENST00000261769 TMTC2Q8N394 836 aa16.25■□□□□ 0.19
CDH1-201ENST00000261769 ESR2Q92731 530 aa16.25■□□□□ 0.19
CDH1-201ENST00000261769 STX8Q9UNK0 236 aa16.25■□□□□ 0.19
CDH1-201ENST00000261769 ZNF335Q9H4Z2 1342 aaPredicted RBP16.25■□□□□ 0.19
CDH1-201ENST00000261769 TMEM266Q2M3C6 531 aa16.25■□□□□ 0.19
CDH1-201ENST00000261769 SLC9C2Q5TAH2 1124 aa16.25■□□□□ 0.19
CDH1-201ENST00000261769 CNNM2Q9H8M5 875 aa16.25■□□□□ 0.19
CDH1-201ENST00000261769 PDILTQ8N807 584 aa16.25■□□□□ 0.19
CDH1-201ENST00000261769 TSPYL6Q8N831 410 aa16.25■□□□□ 0.19
CDH1-201ENST00000261769 LGR6Q9HBX8 967 aa16.25■□□□□ 0.19
CDH1-201ENST00000261769 PDE8AO60658 829 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 GNAT2P19087 354 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 NLRP5P59047 1200 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 SUPT20HQ8NEM7 779 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 CARD10Q9BWT7 1032 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 VEZTQ9HBM0 779 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
CDH1-201ENST00000261769 SLC4A4Q9Y6R1 1079 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 LDHBP07195 334 aaKnown RBP16.24■□□□□ 0.19
CDH1-201ENST00000261769 FAM196AQ6ZSG2 479 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 CCDC83Q8IWF9 413 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 LIMCH1Q9UPQ0 1083 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 CHL1O00533 1208 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 KRT24Q2M2I5 525 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 CCDC82Q8N4S0 544 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 FAM89AQ96GI7 184 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 WWC3Q9ULE0 1092 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 PREX2Q70Z35 1606 aa16.24■□□□□ 0.19
CDH1-201ENST00000261769 SCLT1Q96NL6 688 aa16.23■□□□□ 0.19
CDH1-201ENST00000261769 TNMDQ9H2S6 317 aa16.23■□□□□ 0.19
CDH1-201ENST00000261769 INSRP06213 1382 aa16.23■□□□□ 0.19
CDH1-201ENST00000261769 ARAP3Q8WWN8 1544 aa16.23■□□□□ 0.19
CDH1-201ENST00000261769 RIMBP2O15034 1052 aa16.23■□□□□ 0.19
CDH1-201ENST00000261769 A1BGP04217 495 aa16.23■□□□□ 0.19
CDH1-201ENST00000261769 TSPY3P0CV98 308 aa16.23■□□□□ 0.19
CDH1-201ENST00000261769 TSPY8P0CW00 308 aa16.23■□□□□ 0.19
CDH1-201ENST00000261769 BAG4O95429 457 aaKnown RBP16.23■□□□□ 0.19
CDH1-201ENST00000261769 GNAQP50148 359 aa16.23■□□□□ 0.19
CDH1-201ENST00000261769 TTC22Q5TAA0 569 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms