RNA–Protein interactions for RNA: ENST00000257818.2

LMO2-201, Transcript of LIM domain only 2, humanhuman

TSL 1 (best) BASIC

Gene LMO2, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-201ENST00000257818 NFATC2IPQ8NCF5 419 aa29.59■■■□□ 2.33
LMO2-201ENST00000257818 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.59■■■□□ 2.33
LMO2-201ENST00000257818 PI4KAP2A4QPH2 592 aa29.59■■■□□ 2.33
LMO2-201ENST00000257818 PI4KAP1Q8N8J0 262 aa29.59■■■□□ 2.33
LMO2-201ENST00000257818 PIBF1Q8WXW3 757 aa29.59■■■□□ 2.33
LMO2-201ENST00000257818 CYP27B1O15528 508 aa29.58■■■□□ 2.33
LMO2-201ENST00000257818 LETM1O95202 739 aaPredicted RBP29.58■■■□□ 2.33
LMO2-201ENST00000257818 DBF4Q9UBU7 674 aaPredicted RBP29.58■■■□□ 2.33
LMO2-201ENST00000257818 PROSER3Q2NL68 480 aa29.57■■■□□ 2.32
LMO2-201ENST00000257818 SMC3Q9UQE7 1217 aa29.57■■■□□ 2.32
LMO2-201ENST00000257818 FIBPO43427 364 aa29.57■■■□□ 2.32
LMO2-201ENST00000257818 TTC12Q9H892 705 aaPredicted RBP29.56■■■□□ 2.32
LMO2-201ENST00000257818 ZNF790Q6PG37 636 aa29.56■■■□□ 2.32
LMO2-201ENST00000257818 FUCA2Q9BTY2 467 aa29.56■■■□□ 2.32
LMO2-201ENST00000257818 HYPKQ9NX55 129 aa29.56■■■□□ 2.32
LMO2-201ENST00000257818 CASTP20810 708 aaKnown RBP29.55■■■□□ 2.32
LMO2-201ENST00000257818 DNAAF4Q8WXU2 420 aa29.55■■■□□ 2.32
LMO2-201ENST00000257818 USP42Q9H9J4 1324 aaKnown RBP29.55■■■□□ 2.32
LMO2-201ENST00000257818 DTNBO60941 627 aa29.55■■■□□ 2.32
LMO2-201ENST00000257818 NOLC1Q14978 699 aaKnown RBP eCLIP29.55■■■□□ 2.32
LMO2-201ENST00000257818 MYRIPQ8NFW9 859 aa29.55■■■□□ 2.32
LMO2-201ENST00000257818 TOM1L2Q6ZVM7 507 aa29.54■■■□□ 2.32
LMO2-201ENST00000257818 BEND3Q5T5X7 828 aa29.54■■■□□ 2.32
LMO2-201ENST00000257818 MTERF4Q7Z6M4 381 aaKnown RBP29.54■■■□□ 2.32
LMO2-201ENST00000257818 KDM4AO75164 1064 aa29.53■■■□□ 2.32
LMO2-201ENST00000257818 C17orf53Q8N3J3 647 aaPredicted RBP29.53■■■□□ 2.32
LMO2-201ENST00000257818 ADCY9O60503 1353 aa29.53■■■□□ 2.32
LMO2-201ENST00000257818 WDR17Q8IZU2 1322 aa29.53■■■□□ 2.32
LMO2-201ENST00000257818 DNTTIP2Q5QJE6 756 aaKnown RBP29.52■■■□□ 2.32
LMO2-201ENST00000257818 PKD1L3Q7Z443 1732 aa29.52■■■□□ 2.32
LMO2-201ENST00000257818 PTH1RQ03431 593 aa29.52■■■□□ 2.32
LMO2-201ENST00000257818 GIMAP6Q6P9H5 292 aa29.52■■■□□ 2.32
LMO2-201ENST00000257818 CCDC83Q8IWF9 413 aa29.52■■■□□ 2.32
LMO2-201ENST00000257818 DCAF5Q96JK2 942 aa29.52■■■□□ 2.32
LMO2-201ENST00000257818 MTMR6Q9Y217 621 aa29.52■■■□□ 2.32
LMO2-201ENST00000257818 ATP6V1DQ9Y5K8 247 aa29.52■■■□□ 2.32
LMO2-201ENST00000257818 GJB2P29033 226 aa29.51■■■□□ 2.32
LMO2-201ENST00000257818 ADCK5Q3MIX3 580 aa29.51■■■□□ 2.32
LMO2-201ENST00000257818 DNM1Q05193 864 aaKnown RBP29.51■■■□□ 2.31
LMO2-201ENST00000257818 JARID2Q92833 1246 aaPredicted RBP29.51■■■□□ 2.31
LMO2-201ENST00000257818 TTC41PQ6P2S7 1318 aa29.5■■■□□ 2.31
LMO2-201ENST00000257818 ST3GAL1Q11201 340 aa29.5■■■□□ 2.31
LMO2-201ENST00000257818 ABCA3Q99758 1704 aa29.49■■■□□ 2.31
LMO2-201ENST00000257818 AP5Z1O43299 807 aa29.49■■■□□ 2.31
LMO2-201ENST00000257818 GLRX3O76003 335 aaKnown RBP29.49■■■□□ 2.31
LMO2-201ENST00000257818 VPS53Q5VIR6 699 aa29.48■■■□□ 2.31
LMO2-201ENST00000257818 DIAPH3Q9NSV4 1193 aa29.48■■■□□ 2.31
LMO2-201ENST00000257818 COL5A2P05997 1499 aaPredicted RBP29.48■■■□□ 2.31
LMO2-201ENST00000257818 JAKMIP1Q96N16 626 aaKnown RBP29.48■■■□□ 2.31
LMO2-201ENST00000257818 PDRG1Q9NUG6 133 aa29.48■■■□□ 2.31
LMO2-201ENST00000257818 SPTLC3Q9NUV7 552 aa29.48■■■□□ 2.31
LMO2-201ENST00000257818 MAP3K2Q9Y2U5 619 aa29.48■■■□□ 2.31
LMO2-201ENST00000257818 HSP90AB4PQ58FF6 505 aa29.47■■■□□ 2.31
LMO2-201ENST00000257818 PRPF40BQ6NWY9 871 aaKnown RBP29.47■■■□□ 2.31
LMO2-201ENST00000257818 PRIMPOLQ96LW4 560 aa29.47■■■□□ 2.31
LMO2-201ENST00000257818 KCNB2Q92953 911 aa29.47■■■□□ 2.31
LMO2-201ENST00000257818 ZNF496Q96IT1 587 aaPredicted RBP29.47■■■□□ 2.31
LMO2-201ENST00000257818 ARID3AQ99856 593 aa29.47■■■□□ 2.31
LMO2-201ENST00000257818 ZSWIM6Q9HCJ5 1215 aa29.47■■■□□ 2.31
LMO2-201ENST00000257818 STRN4Q9NRL3 753 aa29.47■■■□□ 2.31
LMO2-201ENST00000257818 PLEKHG2Q9H7P9 1386 aa29.47■■■□□ 2.31
LMO2-201ENST00000257818 NHSL1Q5SYE7 1610 aa29.46■■■□□ 2.31
LMO2-201ENST00000257818 C5P01031 1676 aa29.46■■■□□ 2.31
LMO2-201ENST00000257818 PDIA6Q15084 440 aa29.46■■■□□ 2.31
LMO2-201ENST00000257818 AIMP1Q12904 312 aaKnown RBP29.45■■■□□ 2.31
LMO2-201ENST00000257818 DDX21Q9NR30 783 aaKnown RBP eCLIP29.45■■■□□ 2.31
LMO2-201ENST00000257818 KSR2Q6VAB6 950 aa29.45■■■□□ 2.3
LMO2-201ENST00000257818 KLHL34Q8N239 644 aa29.45■■■□□ 2.3
LMO2-201ENST00000257818 RUFY2Q8WXA3 655 aa29.45■■■□□ 2.3
LMO2-201ENST00000257818 TSC1Q92574 1164 aa29.45■■■□□ 2.3
LMO2-201ENST00000257818 TM6SF1Q9BZW5 370 aa29.45■■■□□ 2.3
LMO2-201ENST00000257818 CABP4P57796 275 aa29.44■■■□□ 2.3
LMO2-201ENST00000257818 OS9Q13438 667 aaPredicted RBP29.44■■■□□ 2.3
LMO2-201ENST00000257818 ZSCAN31Q96LW9 406 aaPredicted RBP29.44■■■□□ 2.3
LMO2-201ENST00000257818 HMGN5P82970 282 aaKnown RBP29.43■■■□□ 2.3
LMO2-201ENST00000257818 ME3Q16798 604 aa29.43■■■□□ 2.3
LMO2-201ENST00000257818 TTC5Q8N0Z6 440 aa29.43■■■□□ 2.3
LMO2-201ENST00000257818 ZCRB1Q8TBF4 217 aaKnown RBP29.43■■■□□ 2.3
LMO2-201ENST00000257818 SH2B1Q9NRF2 756 aaPredicted RBP29.43■■■□□ 2.3
LMO2-201ENST00000257818 MRC1P22897 1456 aa29.43■■■□□ 2.3
LMO2-201ENST00000257818 GTF2F1P35269 517 aaKnown RBP eCLIP29.43■■■□□ 2.3
LMO2-201ENST00000257818 LARP1Q6PKG0 1096 aaKnown RBP29.43■■■□□ 2.3
LMO2-201ENST00000257818 CYP46A1Q9Y6A2 500 aa29.43■■■□□ 2.3
LMO2-201ENST00000257818 MTX1Q13505 466 aa29.42■■■□□ 2.3
LMO2-201ENST00000257818 DDX54Q8TDD1 881 aaKnown RBP29.42■■■□□ 2.3
LMO2-201ENST00000257818 PLCB2Q00722 1185 aa29.42■■■□□ 2.3
LMO2-201ENST00000257818 NECTIN1Q15223 517 aa29.42■■■□□ 2.3
LMO2-201ENST00000257818 ZNF710Q8N1W2 664 aa29.42■■■□□ 2.3
LMO2-201ENST00000257818 CLASRPQ8N2M8 674 aaKnown RBP29.42■■■□□ 2.3
LMO2-201ENST00000257818 ECHDC1Q9NTX5 307 aa29.42■■■□□ 2.3
LMO2-201ENST00000257818 PARP4Q9UKK3 1724 aaKnown RBP29.42■■■□□ 2.3
LMO2-201ENST00000257818 MYL6BP14649 208 aa29.41■■■□□ 2.3
LMO2-201ENST00000257818 EVA1CP58658 441 aa29.41■■■□□ 2.3
LMO2-201ENST00000257818 KCNF1Q9H3M0 494 aa29.41■■■□□ 2.3
LMO2-201ENST00000257818 VPS37CA5D8V6 355 aaPredicted RBP29.41■■■□□ 2.3
LMO2-201ENST00000257818 NECAB1Q8N987 351 aa29.41■■■□□ 2.3
LMO2-201ENST00000257818 CWF19L2Q2TBE0 894 aaKnown RBP29.4■■■□□ 2.3
LMO2-201ENST00000257818 USP16Q9Y5T5 823 aa29.4■■■□□ 2.3
LMO2-201ENST00000257818 CARD10Q9BWT7 1032 aa29.4■■■□□ 2.3
LMO2-201ENST00000257818 PCDH11XQ9BZA7 1347 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 908.3 ms