RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 FAM177A1Q8N128 213 aaPredicted RBP8.46□□□□□ -1.06
SSR1-201ENST00000244763 GSDMDP57764 484 aa8.46□□□□□ -1.06
SSR1-201ENST00000244763 FILIP1Q7Z7B0 1213 aa8.46□□□□□ -1.06
SSR1-201ENST00000244763 CCDC8Q9H0W5 538 aaPredicted RBP8.46□□□□□ -1.06
SSR1-201ENST00000244763 SOS1Q07889 1333 aaPredicted RBP8.45□□□□□ -1.06
SSR1-201ENST00000244763 GSTTP1A0A1W2PQM5 241 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 MCM5P33992 734 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 ZC3H12CQ9C0D7 883 aaKnown RBP8.45□□□□□ -1.06
SSR1-201ENST00000244763 GRPEL1Q9HAV7 217 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 SAMM50Q9Y512 469 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 GNAT2P19087 354 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 IBSPP21815 317 aaPredicted RBP8.45□□□□□ -1.06
SSR1-201ENST00000244763 GOLIM4O00461 696 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 PRPF40BQ6NWY9 871 aaKnown RBP8.45□□□□□ -1.06
SSR1-201ENST00000244763 TPTE2Q6XPS3 522 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 ESR2Q92731 530 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 MIS18AQ9NYP9 233 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 SSX2IPQ9Y2D8 614 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 ACTN2P35609 894 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 CHMP4BP1P59074 171 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 SSH1Q8WYL5 1049 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 NEK1Q96PY6 1258 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 CASQ1P31415 396 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 TNNI2P48788 182 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 MAP3K9P80192 1104 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 DDB1Q16531 1140 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 KIF18AQ8NI77 898 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 UHRF1BP1LA0JNW5 1464 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 ABCC5O15440 1437 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 TSPY3P0CV98 308 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 TSPY8P0CW00 308 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 FMNL3Q8IVF7 1028 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 HOMER2Q9NSB8 354 aa8.45□□□□□ -1.06
SSR1-201ENST00000244763 PCF11O94913 1555 aaKnown RBP8.44□□□□□ -1.06
SSR1-201ENST00000244763 MTIF2P46199 727 aaKnown RBP8.44□□□□□ -1.06
SSR1-201ENST00000244763 METAP2P50579 478 aaKnown RBP eCLIP8.44□□□□□ -1.06
SSR1-201ENST00000244763 ZNF804AQ7Z570 1209 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 EYA3Q99504 573 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 ACEP12821 1306 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 MCM4P33991 863 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 CDCA7Q9BWT1 371 aaPredicted RBP8.44□□□□□ -1.06
SSR1-201ENST00000244763 UBAP1LF5GYI3 381 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 MYCNP04198 464 aaPredicted RBP8.44□□□□□ -1.06
SSR1-201ENST00000244763 PTPN14Q15678 1187 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 RTCBQ9Y3I0 505 aaKnown RBP8.44□□□□□ -1.06
SSR1-201ENST00000244763 CALM1P0DP23 149 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 CALM2P0DP24 149 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 CALM3P0DP25 149 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 AKAP4Q5JQC9 854 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 ZBTB3Q9H5J0 574 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 TDRD12Q587J7 1177 aaKnown RBP8.44□□□□□ -1.06
SSR1-201ENST00000244763 TBC1D5Q92609 795 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 ALS2CR12Q96Q35 445 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 IFIT1BQ5T764 474 aaKnown RBP8.44□□□□□ -1.06
SSR1-201ENST00000244763 LUZP1Q86V48 1076 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 SREK1Q8WXA9 508 aaKnown RBP8.44□□□□□ -1.06
SSR1-201ENST00000244763 TSNARE1Q96NA8 513 aa8.44□□□□□ -1.06
SSR1-201ENST00000244763 PUS7Q96PZ0 661 aaKnown RBP8.44□□□□□ -1.06
SSR1-201ENST00000244763 KLHL10Q6JEL2 608 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 APBB1IPQ7Z5R6 666 aaPredicted RBP8.43□□□□□ -1.06
SSR1-201ENST00000244763 DUOX2Q9NRD8 1548 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 WTAPQ15007 396 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 KIF4BQ2VIQ3 1234 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 ARHGAP45Q92619 1136 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 POTEB2H3BUK9 544 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 TBCAO75347 108 aaKnown RBP8.43□□□□□ -1.06
SSR1-201ENST00000244763 ATP6V1AP38606 617 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 PRPHP41219 470 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 USHBP1Q8N6Y0 703 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 JDP2Q8WYK2 163 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 PRKCSHP14314 528 aaPredicted RBP8.43□□□□□ -1.06
SSR1-201ENST00000244763 NUP88Q99567 741 aaPredicted RBP8.43□□□□□ -1.06
SSR1-201ENST00000244763 C11orf95C9JLR9 678 aaPredicted RBP8.43□□□□□ -1.06
SSR1-201ENST00000244763 CALML3P27482 149 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 CERS3Q8IU89 383 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 EHBP1Q8NDI1 1231 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 TNPO1Q92973 898 aaKnown RBP8.43□□□□□ -1.06
SSR1-201ENST00000244763 USP16Q9Y5T5 823 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 RALGAPBQ86X10 1494 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 KDM5BQ9UGL1 1544 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 RBM25P49756 843 aaKnown RBP8.43□□□□□ -1.06
SSR1-201ENST00000244763 CCDC40Q4G0X9 1142 aa8.43□□□□□ -1.06
SSR1-201ENST00000244763 IL15P40933 162 aaPredicted RBP8.42□□□□□ -1.06
SSR1-201ENST00000244763 UBE3BQ7Z3V4 1068 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 CTAGE1Q96RT6 745 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 ANKRD2Q9GZV1 360 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 STX8Q9UNK0 236 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 TMCO3Q6UWJ1 677 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 LRRC59Q96AG4 307 aaKnown RBP8.42□□□□□ -1.06
SSR1-201ENST00000244763 LRSAM1Q6UWE0 723 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 CKAP2LQ8IYA6 745 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 VSIG10Q8N0Z9 540 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 PARP3Q9Y6F1 533 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 COMMD10Q9Y6G5 202 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 IFFO1Q0D2I5 559 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 TCERG1LQ5VWI1 586 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 CCDC102BQ68D86 513 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.42□□□□□ -1.06
SSR1-201ENST00000244763 PI4KAP2A4QPH2 592 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 PRC1O43663 620 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms